Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15950

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
3,619,838	+		BPHYT_RS15945	0.44	-0.8
3,619,893	+		BPHYT_RS15945	0.47	-1.0
3,619,894	-		BPHYT_RS15945	0.47	+0.0
3,620,274	+		BPHYT_RS15945	0.71	+1.7
3,620,275	-		BPHYT_RS15945	0.72	-0.8
3,620,275	-		BPHYT_RS15945	0.72	-0.1
3,620,275	-		BPHYT_RS15945	0.72	-0.4
3,620,306	+		BPHYT_RS15945	0.74	-1.0
3,620,307	-		BPHYT_RS15945	0.74	+0.8
3,620,309	+		BPHYT_RS15945	0.74	-0.3
3,620,405	-		BPHYT_RS15945	0.80	+0.3
3,620,454	-		BPHYT_RS15945	0.83	-0.1
3,620,567	-				-0.3
3,620,627	+				-0.2
3,620,628	-				-0.2
3,620,820	-				-0.4
3,620,820	-				-1.2
3,621,186	+		BPHYT_RS15950	0.48	-1.3
3,621,187	-		BPHYT_RS15950	0.48	-0.8
3,621,206	-		BPHYT_RS15950	0.50	-0.8
3,621,248	+		BPHYT_RS15950	0.54	-1.2
3,621,455	-		BPHYT_RS15950	0.76	-0.7
3,621,701	+				-0.4
3,621,873	+		BPHYT_RS15955	0.43	+0.6
3,621,873	+		BPHYT_RS15955	0.43	-0.1
3,621,874	-		BPHYT_RS15955	0.43	+1.7
3,621,988	-		BPHYT_RS15955	0.67	-1.1
3,622,062	+		BPHYT_RS15955	0.83	-0.1
3,622,190	+				-0.1
3,622,224	-				+0.0
3,622,247	+				+0.5
3,622,329	+				-0.6
3,622,330	-				+0.1
3,622,601	-		BPHYT_RS15960	0.28	-0.1
3,622,640	+		BPHYT_RS15960	0.31	-2.3
3,622,641	-		BPHYT_RS15960	0.31	+0.0