Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13210
Experiment: A22 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | A22 0.005 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,013,304 | + | BPHYT_RS13205 | 0.38 | -1.9 | |
3,014,178 | - | BPHYT_RS13210 | 0.52 | +0.1 | |
3,014,215 | + | BPHYT_RS13210 | 0.57 | -0.8 | |
3,014,216 | - | BPHYT_RS13210 | 0.57 | -0.2 | |
3,014,400 | - | BPHYT_RS13210 | 0.79 | +2.1 | |
3,014,419 | + | BPHYT_RS13210 | 0.81 | +0.0 | |
3,014,420 | - | BPHYT_RS13210 | 0.81 | +0.5 | |
3,014,701 | + | -0.8 | |||
3,014,710 | + | -0.0 | |||
3,014,919 | + | +1.1 | |||
3,015,395 | + | -0.9 | |||
3,015,428 | + | -0.6 | |||
3,015,428 | + | -0.3 | |||
3,015,428 | + | +0.6 | |||
3,015,429 | - | -0.7 | |||
3,015,494 | + | +0.8 | |||
3,015,495 | - | -0.2 |
Or see this region's nucleotide sequence