Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12890

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
2,941,964	-				-0.5
2,942,037	-				+0.4
2,942,060	-				-0.1
2,942,085	-				+1.0
2,942,117	+				+0.1
2,942,140	-				+0.8
2,942,198	+				-0.5
2,942,198	+				+0.7
2,942,199	-				+0.4
2,942,367	-				+0.2
2,942,476	-				-0.4
2,942,476	-				-0.0
2,942,655	-				-0.3
2,942,761	-				-0.0
2,942,765	-				-0.1
2,942,765	-				-0.5
2,942,765	-				-0.3
2,942,810	+				-0.0
2,942,811	-				-0.5
2,942,855	-		BPHYT_RS12890	0.13	-0.0
2,942,968	+		BPHYT_RS12890	0.28	-0.3
2,943,061	-		BPHYT_RS12890	0.40	-0.4
2,943,188	+		BPHYT_RS12890	0.57	+0.5
2,943,188	+		BPHYT_RS12890	0.57	-0.2
2,943,191	-		BPHYT_RS12890	0.57	+0.2
2,943,209	+		BPHYT_RS12890	0.60	-0.4
2,943,209	+		BPHYT_RS12890	0.60	+0.3
2,943,210	-		BPHYT_RS12890	0.60	-0.7
2,943,210	-		BPHYT_RS12890	0.60	+0.3
2,943,239	+		BPHYT_RS12890	0.64	+0.3
2,943,398	+		BPHYT_RS12890	0.85	+1.4
2,943,399	-		BPHYT_RS12890	0.85	-0.6
2,943,497	-				+0.7
2,943,502	+				+0.2
2,943,516	+				-0.9
2,943,761	-				+0.6
2,943,878	+				-0.4
2,943,879	-				+0.4
2,944,106	+				+1.0
2,944,106	+				-1.6
2,944,106	+				+0.1
2,944,106	+				+1.8
2,944,254	+				+0.5
2,944,255	-				+0.1
2,944,392	-				+0.4
2,944,422	-				-1.8
2,944,467	-				+0.3