Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12290

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
2,806,931	+		BPHYT_RS12285	0.60	-0.2
2,806,932	-		BPHYT_RS12285	0.60	-0.1
2,806,988	+		BPHYT_RS12285	0.64	-0.3
2,807,178	-		BPHYT_RS12285	0.78	+1.4
2,807,178	-		BPHYT_RS12285	0.78	+0.1
2,807,222	+		BPHYT_RS12285	0.82	-0.1
2,807,222	+		BPHYT_RS12285	0.82	-1.3
2,807,494	+				+0.0
2,807,494	+				-0.1
2,807,494	+				-0.9
2,807,495	-				-0.8
2,807,504	-				+0.4
2,807,715	+				-0.2
2,807,737	+				-0.2
2,807,738	-				+1.1
2,807,738	-				+0.8
2,807,738	-				+0.5
2,807,859	+		BPHYT_RS12290	0.35	-0.8
2,808,012	+		BPHYT_RS12290	0.70	-0.3
2,808,223	+				+0.0
2,808,224	-				+2.1
2,808,335	+				-0.2
2,808,335	+				-0.4
2,808,350	+				-0.0
2,808,350	+				-0.0
2,808,350	+				+0.4
2,808,354	+				+0.5
2,808,354	+				+0.0
2,808,354	+				-0.5
2,808,355	-				-0.1
2,808,355	-				-1.2
2,808,355	-				-0.1
2,808,355	-				+0.1
2,808,355	-				-0.3
2,808,640	-		BPHYT_RS12295	0.35	+0.3