Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08815

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
1,996,790	+		BPHYT_RS08810	0.28	-0.5
1,996,848	-		BPHYT_RS08810	0.34	-0.4
1,997,021	+		BPHYT_RS08810	0.53	-0.2
1,997,022	-		BPHYT_RS08810	0.53	-0.5
1,997,120	+		BPHYT_RS08810	0.63	-0.7
1,997,228	+		BPHYT_RS08810	0.75	-0.5
1,997,273	+		BPHYT_RS08810	0.80	-0.8
1,997,534	+				-0.3
1,997,535	-				-0.5
1,997,535	-				-0.1
1,997,564	+				+0.0
1,997,670	+				-0.0
1,997,671	-				+0.3
1,997,688	+				-0.7
1,997,688	+				+0.2
1,998,037	+		BPHYT_RS08815	0.34	+0.6
1,998,245	-		BPHYT_RS08815	0.54	+0.8
1,998,245	-		BPHYT_RS08815	0.54	+0.8
1,998,245	-		BPHYT_RS08815	0.54	+1.0
1,998,340	-		BPHYT_RS08815	0.63	+1.2
1,998,340	-		BPHYT_RS08815	0.63	+0.6
1,998,340	-		BPHYT_RS08815	0.63	+0.8
1,998,641	-				+0.5
1,999,261	+				-1.1
1,999,261	+				+2.1
1,999,261	+				+0.3
1,999,368	+				-0.0
1,999,369	-				-0.3
1,999,446	+				-0.1
1,999,447	-				+0.1
1,999,536	-				+0.3