Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07055

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
1,594,309	+				+0.3
1,594,309	+				-2.1
1,594,382	+				-0.8
1,594,383	-				-0.2
1,594,383	-				+0.1
1,594,383	-				+1.1
1,594,761	+		BPHYT_RS07050	0.67	+0.1
1,594,762	-		BPHYT_RS07050	0.68	-0.9
1,594,890	+				+0.2
1,594,891	-				-0.3
1,594,919	+				+0.2
1,595,927	-		BPHYT_RS07055	0.47	-0.5
1,596,277	+		BPHYT_RS07055	0.67	-1.0
1,596,544	+		BPHYT_RS07055	0.83	-0.4
1,596,714	+				-0.2
1,596,715	-				-0.1
1,596,901	-				+0.2
1,597,130	+		BPHYT_RS07060	0.18	-0.0
1,597,307	+		BPHYT_RS07060	0.35	-0.8
1,597,401	+		BPHYT_RS07060	0.44	+0.4
1,597,503	-		BPHYT_RS07060	0.54	+0.4
1,597,658	-		BPHYT_RS07060	0.69	-0.9