Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05945

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
1,350,389	+				-1.5
1,350,390	-				+0.5
1,350,395	-				-0.2
1,350,472	+				-0.2
1,350,472	+				-0.2
1,350,543	+				-0.2
1,350,544	-				-0.0
1,350,749	+		BPHYT_RS05940	0.26	-1.7
1,350,750	-		BPHYT_RS05940	0.27	-0.4
1,350,927	+		BPHYT_RS05940	0.65	-0.0
1,351,254	+				-0.1
1,351,254	+				-0.8
1,351,311	+		BPHYT_RS05945	0.10	-0.3
1,351,311	+		BPHYT_RS05945	0.10	+0.7
1,351,878	+		BPHYT_RS05945	0.57	-0.1
1,351,899	+		BPHYT_RS05945	0.59	-0.3
1,351,899	+		BPHYT_RS05945	0.59	+0.0
1,351,900	-		BPHYT_RS05945	0.59	-0.3
1,351,972	+		BPHYT_RS05945	0.65	-1.3
1,351,975	-		BPHYT_RS05945	0.65	-0.8
1,352,064	+		BPHYT_RS05945	0.72	-0.0
1,352,262	+		BPHYT_RS05945	0.89	+0.3
1,352,428	+				+0.2
1,353,288	-		BPHYT_RS05950	0.31	-0.3
1,353,288	-		BPHYT_RS05950	0.31	+0.2
1,353,342	+		BPHYT_RS05950	0.33	-0.0