Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS03655
Experiment: A22 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | A22 0.005 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 830,748 | - | BPHYT_RS03650 | 0.83 | +0.3 | |
| 831,019 | - | -1.2 | |||
| 831,109 | + | -0.8 | |||
| 831,110 | - | -1.2 | |||
| 831,152 | + | +0.6 | |||
| 831,192 | + | -0.5 | |||
| 831,193 | - | +0.4 | |||
| 831,293 | - | -1.5 | |||
| 831,318 | + | -3.1 | |||
| 831,567 | - | BPHYT_RS03655 | 0.39 | -1.2 | |
| 831,833 | + | BPHYT_RS03655 | 0.79 | -0.8 | |
| 831,983 | - | -1.4 | |||
| 832,211 | + | BPHYT_RS03660 | 0.13 | -0.1 | |
| 832,416 | - | BPHYT_RS03660 | 0.38 | -0.1 | |
| 832,416 | - | BPHYT_RS03660 | 0.38 | -0.3 | |
| 832,416 | - | BPHYT_RS03660 | 0.38 | +0.9 | |
| 832,416 | - | BPHYT_RS03660 | 0.38 | -0.3 | |
| 832,426 | - | BPHYT_RS03660 | 0.39 | +0.2 | |
| 832,745 | + | BPHYT_RS03660 | 0.78 | +0.0 | |
| 832,974 | + | -0.5 |
Or see this region's nucleotide sequence