Experiment: A22 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS02965 and BPHYT_RS02970 are separated by 37 nucleotides BPHYT_RS02970 and BPHYT_RS02975 are separated by 386 nucleotides
BPHYT_RS02965: BPHYT_RS02965 - membrane protein, at 658,575 to 659,660
_RS02965
BPHYT_RS02970: BPHYT_RS02970 - excinuclease ABC subunit A, at 659,698 to 662,571
_RS02970
BPHYT_RS02975: BPHYT_RS02975 - membrane protein, at 662,958 to 664,115
_RS02975
Position (kb) 659
660
661
662
663 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 659.066 kb on + strand, within BPHYT_RS02965 at 659.066 kb on + strand, within BPHYT_RS02965 at 659.067 kb on - strand, within BPHYT_RS02965 at 659.540 kb on + strand, within BPHYT_RS02965 at 659.543 kb on - strand, within BPHYT_RS02965 at 659.614 kb on - strand at 659.666 kb on - strand at 659.666 kb on - strand at 659.696 kb on - strand at 659.700 kb on - strand at 659.892 kb on + strand at 659.895 kb on + strand at 659.895 kb on + strand at 659.896 kb on - strand at 659.977 kb on + strand at 659.977 kb on + strand at 659.977 kb on + strand at 659.977 kb on + strand at 659.977 kb on + strand at 659.977 kb on + strand at 659.977 kb on + strand at 659.978 kb on - strand at 659.981 kb on + strand at 659.981 kb on + strand at 659.981 kb on + strand at 659.981 kb on + strand at 659.981 kb on + strand at 659.981 kb on + strand at 659.981 kb on + strand at 659.982 kb on - strand at 659.982 kb on - strand at 659.982 kb on - strand at 659.983 kb on + strand at 659.983 kb on + strand at 660.022 kb on + strand, within BPHYT_RS02970 at 660.022 kb on + strand, within BPHYT_RS02970 at 660.022 kb on + strand, within BPHYT_RS02970 at 660.022 kb on + strand, within BPHYT_RS02970 at 660.084 kb on - strand, within BPHYT_RS02970 at 660.152 kb on + strand, within BPHYT_RS02970 at 660.152 kb on + strand, within BPHYT_RS02970 at 660.203 kb on + strand, within BPHYT_RS02970 at 660.204 kb on - strand, within BPHYT_RS02970 at 660.230 kb on + strand, within BPHYT_RS02970 at 660.263 kb on + strand, within BPHYT_RS02970 at 660.263 kb on + strand, within BPHYT_RS02970 at 660.263 kb on + strand at 660.264 kb on - strand, within BPHYT_RS02970 at 660.337 kb on + strand, within BPHYT_RS02970 at 660.338 kb on - strand, within BPHYT_RS02970 at 660.431 kb on + strand, within BPHYT_RS02970 at 660.431 kb on + strand, within BPHYT_RS02970 at 660.431 kb on + strand, within BPHYT_RS02970 at 660.431 kb on + strand, within BPHYT_RS02970 at 660.432 kb on - strand, within BPHYT_RS02970 at 660.575 kb on + strand, within BPHYT_RS02970 at 660.764 kb on + strand, within BPHYT_RS02970 at 660.764 kb on + strand, within BPHYT_RS02970 at 660.764 kb on + strand, within BPHYT_RS02970 at 660.764 kb on + strand, within BPHYT_RS02970 at 660.764 kb on + strand, within BPHYT_RS02970 at 660.764 kb on + strand, within BPHYT_RS02970 at 660.765 kb on - strand, within BPHYT_RS02970 at 660.765 kb on - strand, within BPHYT_RS02970 at 660.765 kb on - strand, within BPHYT_RS02970 at 660.765 kb on - strand, within BPHYT_RS02970 at 660.869 kb on + strand, within BPHYT_RS02970 at 660.870 kb on - strand, within BPHYT_RS02970 at 661.007 kb on + strand, within BPHYT_RS02970 at 661.007 kb on + strand, within BPHYT_RS02970 at 661.007 kb on + strand, within BPHYT_RS02970 at 661.008 kb on - strand, within BPHYT_RS02970 at 661.008 kb on - strand, within BPHYT_RS02970 at 661.106 kb on + strand, within BPHYT_RS02970 at 661.107 kb on - strand, within BPHYT_RS02970 at 661.107 kb on - strand, within BPHYT_RS02970 at 661.107 kb on - strand, within BPHYT_RS02970 at 661.349 kb on + strand, within BPHYT_RS02970 at 661.429 kb on + strand, within BPHYT_RS02970 at 661.429 kb on + strand, within BPHYT_RS02970 at 661.429 kb on + strand, within BPHYT_RS02970 at 661.429 kb on + strand, within BPHYT_RS02970 at 661.429 kb on + strand, within BPHYT_RS02970 at 661.429 kb on + strand, within BPHYT_RS02970 at 661.430 kb on - strand, within BPHYT_RS02970 at 661.469 kb on + strand, within BPHYT_RS02970 at 661.469 kb on + strand, within BPHYT_RS02970 at 661.469 kb on + strand, within BPHYT_RS02970 at 661.470 kb on - strand, within BPHYT_RS02970 at 661.470 kb on - strand, within BPHYT_RS02970 at 661.991 kb on + strand, within BPHYT_RS02970 at 661.991 kb on + strand, within BPHYT_RS02970 at 661.992 kb on - strand, within BPHYT_RS02970 at 661.992 kb on - strand, within BPHYT_RS02970 at 661.992 kb on - strand, within BPHYT_RS02970 at 661.992 kb on - strand, within BPHYT_RS02970 at 662.217 kb on - strand, within BPHYT_RS02970 at 662.252 kb on + strand, within BPHYT_RS02970 at 662.252 kb on + strand, within BPHYT_RS02970 at 662.253 kb on - strand, within BPHYT_RS02970 at 662.253 kb on - strand, within BPHYT_RS02970 at 662.394 kb on - strand at 662.414 kb on + strand at 662.415 kb on - strand at 662.415 kb on - strand at 662.510 kb on - strand at 662.610 kb on - strand at 662.618 kb on + strand at 662.618 kb on + strand at 662.618 kb on + strand at 662.618 kb on + strand at 662.621 kb on + strand at 662.621 kb on + strand at 662.621 kb on + strand at 662.621 kb on + strand at 662.621 kb on + strand at 662.687 kb on + strand at 662.745 kb on - strand at 663.147 kb on + strand, within BPHYT_RS02975
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.005 mg/ml remove 659,066 + BPHYT_RS02965 0.45 -2.0 659,066 + BPHYT_RS02965 0.45 +0.4 659,067 - BPHYT_RS02965 0.45 -0.1 659,540 + BPHYT_RS02965 0.89 -0.5 659,543 - BPHYT_RS02965 0.89 -1.6 659,614 - -1.1 659,666 - +1.7 659,666 - +2.1 659,696 - +0.2 659,700 - +0.7 659,892 + +0.4 659,895 + +0.0 659,895 + -0.4 659,896 - +0.3 659,977 + +1.0 659,977 + +0.2 659,977 + +0.4 659,977 + +0.9 659,977 + +0.8 659,977 + +0.6 659,977 + +0.5 659,978 - +0.0 659,981 + +0.4 659,981 + +0.5 659,981 + -0.4 659,981 + +0.7 659,981 + +1.6 659,981 + +0.6 659,981 + +0.4 659,982 - +0.3 659,982 - -0.4 659,982 - -3.3 659,983 + +1.2 659,983 + +1.1 660,022 + BPHYT_RS02970 0.11 +1.6 660,022 + BPHYT_RS02970 0.11 +2.2 660,022 + BPHYT_RS02970 0.11 +1.5 660,022 + BPHYT_RS02970 0.11 +1.6 660,084 - BPHYT_RS02970 0.13 -0.6 660,152 + BPHYT_RS02970 0.16 +1.3 660,152 + BPHYT_RS02970 0.16 +1.0 660,203 + BPHYT_RS02970 0.18 +1.0 660,204 - BPHYT_RS02970 0.18 -0.5 660,230 + BPHYT_RS02970 0.19 +0.1 660,263 + BPHYT_RS02970 0.20 +0.9 660,263 + BPHYT_RS02970 0.20 +0.9 660,263 + +1.2 660,264 - BPHYT_RS02970 0.20 -1.1 660,337 + BPHYT_RS02970 0.22 +0.9 660,338 - BPHYT_RS02970 0.22 -0.5 660,431 + BPHYT_RS02970 0.26 +0.9 660,431 + BPHYT_RS02970 0.26 +0.6 660,431 + BPHYT_RS02970 0.26 +0.9 660,431 + BPHYT_RS02970 0.26 +0.6 660,432 - BPHYT_RS02970 0.26 +0.5 660,575 + BPHYT_RS02970 0.31 +0.8 660,764 + BPHYT_RS02970 0.37 +1.1 660,764 + BPHYT_RS02970 0.37 +0.8 660,764 + BPHYT_RS02970 0.37 +0.7 660,764 + BPHYT_RS02970 0.37 +0.8 660,764 + BPHYT_RS02970 0.37 +0.4 660,764 + BPHYT_RS02970 0.37 +1.0 660,765 - BPHYT_RS02970 0.37 +0.4 660,765 - BPHYT_RS02970 0.37 +0.9 660,765 - BPHYT_RS02970 0.37 +0.1 660,765 - BPHYT_RS02970 0.37 +0.2 660,869 + BPHYT_RS02970 0.41 +0.1 660,870 - BPHYT_RS02970 0.41 +0.2 661,007 + BPHYT_RS02970 0.46 +0.5 661,007 + BPHYT_RS02970 0.46 +0.7 661,007 + BPHYT_RS02970 0.46 +1.6 661,008 - BPHYT_RS02970 0.46 +0.4 661,008 - BPHYT_RS02970 0.46 +0.6 661,106 + BPHYT_RS02970 0.49 +0.8 661,107 - BPHYT_RS02970 0.49 +0.7 661,107 - BPHYT_RS02970 0.49 +1.3 661,107 - BPHYT_RS02970 0.49 +0.3 661,349 + BPHYT_RS02970 0.57 +0.4 661,429 + BPHYT_RS02970 0.60 +0.0 661,429 + BPHYT_RS02970 0.60 +1.0 661,429 + BPHYT_RS02970 0.60 +2.8 661,429 + BPHYT_RS02970 0.60 +0.5 661,429 + BPHYT_RS02970 0.60 +0.9 661,429 + BPHYT_RS02970 0.60 +0.9 661,430 - BPHYT_RS02970 0.60 +0.5 661,469 + BPHYT_RS02970 0.62 +1.3 661,469 + BPHYT_RS02970 0.62 +0.9 661,469 + BPHYT_RS02970 0.62 +1.2 661,470 - BPHYT_RS02970 0.62 +0.9 661,470 - BPHYT_RS02970 0.62 +0.9 661,991 + BPHYT_RS02970 0.80 +0.6 661,991 + BPHYT_RS02970 0.80 +0.9 661,992 - BPHYT_RS02970 0.80 +0.5 661,992 - BPHYT_RS02970 0.80 +2.2 661,992 - BPHYT_RS02970 0.80 +0.6 661,992 - BPHYT_RS02970 0.80 +0.5 662,217 - BPHYT_RS02970 0.88 +0.7 662,252 + BPHYT_RS02970 0.89 +0.9 662,252 + BPHYT_RS02970 0.89 +1.7 662,253 - BPHYT_RS02970 0.89 +0.4 662,253 - BPHYT_RS02970 0.89 +0.7 662,394 - +0.5 662,414 + +0.8 662,415 - +0.4 662,415 - +1.1 662,510 - +1.0 662,610 - +0.0 662,618 + +0.9 662,618 + +1.1 662,618 + +0.6 662,618 + +0.9 662,621 + +0.9 662,621 + +1.8 662,621 + +1.0 662,621 + +0.6 662,621 + +0.5 662,687 + +0.8 662,745 - -0.4 663,147 + BPHYT_RS02975 0.16 -0.4
Or see this region's nucleotide sequence