Experiment: A22 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS02185 and BPHYT_RS02190 are separated by 260 nucleotides BPHYT_RS02190 and BPHYT_RS02195 are separated by 181 nucleotides BPHYT_RS02195 and BPHYT_RS02200 are separated by 32 nucleotides
BPHYT_RS02185: BPHYT_RS02185 - hypothetical protein, at 502,653 to 503,165
_RS02185
BPHYT_RS02190: BPHYT_RS02190 - hypothetical protein, at 503,426 to 503,971
_RS02190
BPHYT_RS02195: BPHYT_RS02195 - hypothetical protein, at 504,153 to 504,689
_RS02195
BPHYT_RS02200: BPHYT_RS02200 - hypothetical protein, at 504,722 to 506,923
_RS02200
Position (kb) 504
505 Strain fitness (log2 ratio) -2
-1
0
1
2 at 503.178 kb on + strand at 503.187 kb on + strand at 503.188 kb on - strand at 503.278 kb on - strand at 503.437 kb on - strand at 503.504 kb on + strand, within BPHYT_RS02190 at 503.505 kb on - strand, within BPHYT_RS02190 at 503.545 kb on + strand, within BPHYT_RS02190 at 503.545 kb on + strand, within BPHYT_RS02190 at 503.545 kb on + strand, within BPHYT_RS02190 at 503.546 kb on - strand, within BPHYT_RS02190 at 503.761 kb on - strand, within BPHYT_RS02190 at 503.774 kb on + strand, within BPHYT_RS02190 at 503.805 kb on - strand, within BPHYT_RS02190 at 503.993 kb on + strand at 504.222 kb on + strand, within BPHYT_RS02195 at 504.286 kb on - strand, within BPHYT_RS02195 at 504.502 kb on - strand, within BPHYT_RS02195 at 504.877 kb on + strand at 505.017 kb on + strand, within BPHYT_RS02200 at 505.040 kb on + strand, within BPHYT_RS02200 at 505.155 kb on + strand, within BPHYT_RS02200 at 505.263 kb on + strand, within BPHYT_RS02200 at 505.412 kb on + strand, within BPHYT_RS02200 at 505.412 kb on + strand, within BPHYT_RS02200 at 505.412 kb on + strand, within BPHYT_RS02200 at 505.420 kb on - strand, within BPHYT_RS02200 at 505.424 kb on + strand, within BPHYT_RS02200 at 505.425 kb on - strand, within BPHYT_RS02200
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.005 mg/ml remove 503,178 + -0.2 503,187 + +0.0 503,188 - -0.1 503,278 - -0.5 503,437 - +0.3 503,504 + BPHYT_RS02190 0.14 +0.1 503,505 - BPHYT_RS02190 0.14 +0.8 503,545 + BPHYT_RS02190 0.22 -0.3 503,545 + BPHYT_RS02190 0.22 +0.0 503,545 + BPHYT_RS02190 0.22 -0.5 503,546 - BPHYT_RS02190 0.22 -0.1 503,761 - BPHYT_RS02190 0.61 +0.1 503,774 + BPHYT_RS02190 0.64 +0.6 503,805 - BPHYT_RS02190 0.69 -0.6 503,993 + -1.7 504,222 + BPHYT_RS02195 0.13 -1.1 504,286 - BPHYT_RS02195 0.25 -0.2 504,502 - BPHYT_RS02195 0.65 +0.1 504,877 + -1.8 505,017 + BPHYT_RS02200 0.13 +1.8 505,040 + BPHYT_RS02200 0.14 -0.3 505,155 + BPHYT_RS02200 0.20 -0.2 505,263 + BPHYT_RS02200 0.25 -0.1 505,412 + BPHYT_RS02200 0.31 +0.4 505,412 + BPHYT_RS02200 0.31 +0.3 505,412 + BPHYT_RS02200 0.31 -0.5 505,420 - BPHYT_RS02200 0.32 +0.6 505,424 + BPHYT_RS02200 0.32 +0.5 505,425 - BPHYT_RS02200 0.32 -0.6
Or see this region's nucleotide sequence