Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_28085 and AO356_28090 overlap by 4 nucleotides AO356_28090 and AO356_28095 overlap by 4 nucleotides AO356_28095 and AO356_28100 are separated by 259 nucleotides AO356_28100 and AO356_28105 are separated by 60 nucleotides
AO356_28085: AO356_28085 - hypothetical protein, at 6,412,635 to 6,413,624
_28085
AO356_28090: AO356_28090 - ABC transporter ATP-binding protein, at 6,413,621 to 6,414,352
_28090
AO356_28095: AO356_28095 - multidrug ABC transporter permease, at 6,414,349 to 6,415,140
_28095
AO356_28100: AO356_28100 - sulfurtransferase, at 6,415,400 to 6,415,933
_28100
AO356_28105: AO356_28105 - LuxR family transcriptional regulator, at 6,415,994 to 6,416,659
_28105
Position (kb)
6414
6415
6416 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6413.777 kb on + strand, within AO356_28090 at 6414.514 kb on + strand, within AO356_28095 at 6414.523 kb on + strand, within AO356_28095 at 6414.523 kb on + strand, within AO356_28095 at 6414.523 kb on + strand, within AO356_28095 at 6414.523 kb on + strand, within AO356_28095 at 6414.523 kb on + strand, within AO356_28095 at 6414.524 kb on - strand, within AO356_28095 at 6414.524 kb on - strand, within AO356_28095 at 6414.524 kb on - strand, within AO356_28095 at 6414.524 kb on - strand, within AO356_28095 at 6414.524 kb on - strand, within AO356_28095 at 6414.524 kb on - strand, within AO356_28095 at 6414.524 kb on - strand, within AO356_28095 at 6414.541 kb on + strand, within AO356_28095 at 6414.541 kb on + strand, within AO356_28095 at 6414.541 kb on + strand, within AO356_28095 at 6414.541 kb on + strand, within AO356_28095 at 6414.542 kb on - strand, within AO356_28095 at 6414.542 kb on - strand, within AO356_28095 at 6414.542 kb on - strand, within AO356_28095 at 6414.714 kb on - strand, within AO356_28095 at 6414.714 kb on - strand, within AO356_28095 at 6414.721 kb on + strand, within AO356_28095 at 6414.722 kb on - strand, within AO356_28095 at 6414.748 kb on + strand, within AO356_28095 at 6414.748 kb on + strand, within AO356_28095 at 6414.801 kb on - strand, within AO356_28095 at 6414.965 kb on - strand, within AO356_28095 at 6415.024 kb on + strand, within AO356_28095 at 6415.024 kb on + strand, within AO356_28095 at 6415.024 kb on + strand, within AO356_28095 at 6415.025 kb on - strand, within AO356_28095 at 6415.273 kb on - strand at 6415.308 kb on - strand at 6415.311 kb on - strand at 6415.315 kb on + strand at 6415.315 kb on + strand at 6415.315 kb on + strand at 6415.316 kb on - strand at 6415.316 kb on - strand at 6415.316 kb on - strand at 6415.316 kb on - strand at 6415.334 kb on + strand at 6415.370 kb on - strand at 6415.370 kb on - strand at 6415.721 kb on + strand, within AO356_28100 at 6415.722 kb on - strand, within AO356_28100 at 6415.722 kb on - strand, within AO356_28100 at 6415.841 kb on + strand, within AO356_28100 at 6415.841 kb on + strand, within AO356_28100 at 6415.842 kb on - strand, within AO356_28100 at 6415.843 kb on + strand, within AO356_28100 at 6415.843 kb on + strand, within AO356_28100 at 6415.853 kb on + strand, within AO356_28100 at 6415.997 kb on + strand at 6415.998 kb on - strand at 6415.998 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 6,413,777 + AO356_28090 0.21 -1.3 6,414,514 + AO356_28095 0.21 +0.9 6,414,523 + AO356_28095 0.22 +0.1 6,414,523 + AO356_28095 0.22 -0.1 6,414,523 + AO356_28095 0.22 -0.5 6,414,523 + AO356_28095 0.22 -0.8 6,414,523 + AO356_28095 0.22 +1.0 6,414,524 - AO356_28095 0.22 +0.2 6,414,524 - AO356_28095 0.22 +0.4 6,414,524 - AO356_28095 0.22 +0.6 6,414,524 - AO356_28095 0.22 +0.2 6,414,524 - AO356_28095 0.22 +0.2 6,414,524 - AO356_28095 0.22 -0.6 6,414,524 - AO356_28095 0.22 +0.2 6,414,541 + AO356_28095 0.24 -1.9 6,414,541 + AO356_28095 0.24 -0.2 6,414,541 + AO356_28095 0.24 -0.5 6,414,541 + AO356_28095 0.24 +0.4 6,414,542 - AO356_28095 0.24 +0.4 6,414,542 - AO356_28095 0.24 +0.7 6,414,542 - AO356_28095 0.24 -0.5 6,414,714 - AO356_28095 0.46 +0.7 6,414,714 - AO356_28095 0.46 +0.8 6,414,721 + AO356_28095 0.47 -0.5 6,414,722 - AO356_28095 0.47 -0.6 6,414,748 + AO356_28095 0.50 +1.5 6,414,748 + AO356_28095 0.50 +2.0 6,414,801 - AO356_28095 0.57 +0.1 6,414,965 - AO356_28095 0.78 +0.7 6,415,024 + AO356_28095 0.85 +1.0 6,415,024 + AO356_28095 0.85 -0.1 6,415,024 + AO356_28095 0.85 -0.6 6,415,025 - AO356_28095 0.85 -0.2 6,415,273 - +0.5 6,415,308 - -0.2 6,415,311 - +0.2 6,415,315 + +0.2 6,415,315 + -0.4 6,415,315 + -0.5 6,415,316 - -0.2 6,415,316 - +0.7 6,415,316 - +0.5 6,415,316 - +1.2 6,415,334 + -0.2 6,415,370 - +0.8 6,415,370 - -0.1 6,415,721 + AO356_28100 0.60 -0.7 6,415,722 - AO356_28100 0.60 -0.5 6,415,722 - AO356_28100 0.60 +0.2 6,415,841 + AO356_28100 0.83 -0.2 6,415,841 + AO356_28100 0.83 +1.1 6,415,842 - AO356_28100 0.83 +0.3 6,415,843 + AO356_28100 0.83 -0.0 6,415,843 + AO356_28100 0.83 +0.2 6,415,853 + AO356_28100 0.85 -0.1 6,415,997 + -0.7 6,415,998 - -0.5 6,415,998 - -0.8
Or see this region's nucleotide sequence