Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22925 and AO356_22930 are separated by 5 nucleotides AO356_22930 and AO356_22935 are separated by 251 nucleotides AO356_22935 and AO356_22940 are separated by 4 nucleotides AO356_22940 and AO356_22945 overlap by 1 nucleotides
AO356_22925: AO356_22925 - histidine kinase, at 5,119,196 to 5,121,274
_22925
AO356_22930: AO356_22930 - DNA alkylation repair protein, at 5,121,280 to 5,122,383
_22930
AO356_22935: AO356_22935 - hypothetical protein, at 5,122,635 to 5,122,943
_22935
AO356_22940: AO356_22940 - hypothetical protein, at 5,122,948 to 5,123,271
_22940
AO356_22945: AO356_22945 - peptidase M4, at 5,123,271 to 5,124,332
_22945
Position (kb) 5121
5122
5123 Strain fitness (log2 ratio) -2
-1
0
1 at 5120.420 kb on + strand, within AO356_22925 at 5120.420 kb on + strand, within AO356_22925 at 5120.421 kb on - strand, within AO356_22925 at 5120.421 kb on - strand, within AO356_22925 at 5120.421 kb on - strand, within AO356_22925 at 5120.421 kb on - strand, within AO356_22925 at 5120.553 kb on - strand, within AO356_22925 at 5120.739 kb on - strand, within AO356_22925 at 5120.739 kb on - strand, within AO356_22925 at 5120.753 kb on - strand, within AO356_22925 at 5120.842 kb on + strand, within AO356_22925 at 5120.842 kb on + strand, within AO356_22925 at 5120.843 kb on - strand, within AO356_22925 at 5120.843 kb on - strand, within AO356_22925 at 5120.993 kb on + strand, within AO356_22925 at 5120.993 kb on + strand, within AO356_22925 at 5120.993 kb on + strand, within AO356_22925 at 5121.197 kb on + strand at 5121.197 kb on + strand at 5121.384 kb on + strand at 5121.384 kb on + strand at 5121.384 kb on + strand at 5121.385 kb on - strand at 5121.385 kb on - strand at 5121.673 kb on - strand, within AO356_22930 at 5121.673 kb on - strand, within AO356_22930 at 5121.673 kb on - strand, within AO356_22930 at 5121.803 kb on + strand, within AO356_22930 at 5121.803 kb on + strand, within AO356_22930 at 5121.803 kb on + strand, within AO356_22930 at 5121.803 kb on + strand, within AO356_22930 at 5121.804 kb on - strand, within AO356_22930 at 5121.804 kb on - strand, within AO356_22930 at 5122.040 kb on + strand, within AO356_22930 at 5122.041 kb on - strand, within AO356_22930 at 5122.083 kb on - strand, within AO356_22930 at 5122.094 kb on + strand, within AO356_22930 at 5122.173 kb on - strand, within AO356_22930 at 5122.413 kb on + strand at 5122.413 kb on + strand at 5122.413 kb on + strand at 5122.414 kb on - strand at 5122.414 kb on - strand at 5122.414 kb on - strand at 5122.414 kb on - strand at 5122.414 kb on - strand at 5122.414 kb on - strand at 5122.414 kb on - strand at 5122.414 kb on - strand at 5122.414 kb on - strand at 5122.414 kb on - strand at 5122.416 kb on - strand at 5122.572 kb on - strand at 5122.635 kb on - strand at 5122.635 kb on - strand at 5122.792 kb on - strand, within AO356_22935 at 5122.884 kb on + strand, within AO356_22935 at 5122.884 kb on + strand, within AO356_22935 at 5122.884 kb on + strand, within AO356_22935 at 5122.885 kb on - strand, within AO356_22935 at 5122.941 kb on + strand at 5122.942 kb on - strand at 5122.942 kb on - strand at 5122.942 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 5,120,420 + AO356_22925 0.59 -0.9 5,120,420 + AO356_22925 0.59 +1.5 5,120,421 - AO356_22925 0.59 -0.3 5,120,421 - AO356_22925 0.59 -0.0 5,120,421 - AO356_22925 0.59 +1.2 5,120,421 - AO356_22925 0.59 -0.3 5,120,553 - AO356_22925 0.65 +0.1 5,120,739 - AO356_22925 0.74 -0.2 5,120,739 - AO356_22925 0.74 +0.8 5,120,753 - AO356_22925 0.75 -0.2 5,120,842 + AO356_22925 0.79 -0.2 5,120,842 + AO356_22925 0.79 +0.4 5,120,843 - AO356_22925 0.79 +1.5 5,120,843 - AO356_22925 0.79 -0.1 5,120,993 + AO356_22925 0.86 +0.2 5,120,993 + AO356_22925 0.86 +0.2 5,120,993 + AO356_22925 0.86 -0.4 5,121,197 + +0.5 5,121,197 + -1.0 5,121,384 + +0.7 5,121,384 + +0.2 5,121,384 + +1.4 5,121,385 - +1.0 5,121,385 - -0.8 5,121,673 - AO356_22930 0.36 +0.4 5,121,673 - AO356_22930 0.36 +1.7 5,121,673 - AO356_22930 0.36 +0.3 5,121,803 + AO356_22930 0.47 -0.3 5,121,803 + AO356_22930 0.47 -0.7 5,121,803 + AO356_22930 0.47 -0.2 5,121,803 + AO356_22930 0.47 -0.4 5,121,804 - AO356_22930 0.47 +0.8 5,121,804 - AO356_22930 0.47 -0.6 5,122,040 + AO356_22930 0.69 -0.7 5,122,041 - AO356_22930 0.69 -0.8 5,122,083 - AO356_22930 0.73 -0.1 5,122,094 + AO356_22930 0.74 -1.9 5,122,173 - AO356_22930 0.81 -0.4 5,122,413 + +0.2 5,122,413 + +0.5 5,122,413 + -0.0 5,122,414 - +0.4 5,122,414 - -0.2 5,122,414 - -0.3 5,122,414 - +0.4 5,122,414 - +0.7 5,122,414 - -0.8 5,122,414 - +0.1 5,122,414 - +0.4 5,122,414 - +0.1 5,122,414 - +0.2 5,122,416 - +0.9 5,122,572 - -0.9 5,122,635 - -0.3 5,122,635 - +0.8 5,122,792 - AO356_22935 0.51 -1.3 5,122,884 + AO356_22935 0.81 +0.7 5,122,884 + AO356_22935 0.81 -0.3 5,122,884 + AO356_22935 0.81 -0.3 5,122,885 - AO356_22935 0.81 +0.2 5,122,941 + +1.4 5,122,942 - +0.4 5,122,942 - +0.1 5,122,942 - -0.3
Or see this region's nucleotide sequence