Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_18740 and AO356_18745 are separated by 255 nucleotides AO356_18745 and AO356_18750 are separated by 69 nucleotides AO356_18750 and AO356_18755 are separated by 12 nucleotides
AO356_18740: AO356_18740 - succinylglutamate-semialdehyde dehydrogenase, at 4,210,070 to 4,211,536
_18740
AO356_18745: AO356_18745 - succinylarginine dihydrolase, at 4,211,792 to 4,213,138
_18745
AO356_18750: AO356_18750 - topoisomerase II, at 4,213,208 to 4,213,495
_18750
AO356_18755: AO356_18755 - succinylglutamate desuccinylase, at 4,213,508 to 4,214,515
_18755
Position (kb)
4211
4212
4213
4214 Strain fitness (log2 ratio)
-2
-1
0
1 at 4211.266 kb on + strand, within AO356_18740 at 4211.267 kb on - strand, within AO356_18740 at 4211.267 kb on - strand, within AO356_18740 at 4211.267 kb on - strand, within AO356_18740 at 4211.439 kb on - strand at 4211.439 kb on - strand at 4211.439 kb on - strand at 4211.439 kb on - strand at 4211.441 kb on + strand at 4211.441 kb on + strand at 4211.442 kb on - strand at 4211.453 kb on + strand at 4211.575 kb on - strand at 4211.697 kb on + strand at 4211.697 kb on + strand at 4211.697 kb on + strand at 4211.697 kb on + strand at 4211.749 kb on + strand at 4211.749 kb on + strand at 4211.749 kb on + strand at 4211.750 kb on - strand at 4211.750 kb on - strand at 4211.750 kb on - strand at 4211.760 kb on + strand at 4211.762 kb on + strand at 4211.763 kb on - strand at 4211.763 kb on - strand at 4211.801 kb on + strand at 4211.802 kb on - strand at 4211.823 kb on + strand at 4211.823 kb on + strand at 4211.824 kb on - strand at 4211.840 kb on - strand at 4211.840 kb on - strand at 4211.844 kb on - strand at 4211.844 kb on - strand at 4212.197 kb on + strand, within AO356_18745 at 4212.197 kb on + strand, within AO356_18745 at 4212.198 kb on - strand, within AO356_18745 at 4212.198 kb on - strand, within AO356_18745 at 4212.205 kb on + strand, within AO356_18745 at 4212.205 kb on + strand, within AO356_18745 at 4212.347 kb on + strand, within AO356_18745 at 4212.422 kb on + strand, within AO356_18745 at 4212.423 kb on - strand, within AO356_18745 at 4212.497 kb on + strand, within AO356_18745 at 4212.497 kb on + strand, within AO356_18745 at 4212.497 kb on + strand, within AO356_18745 at 4212.581 kb on + strand, within AO356_18745 at 4212.581 kb on + strand, within AO356_18745 at 4212.582 kb on - strand, within AO356_18745 at 4212.582 kb on - strand, within AO356_18745 at 4212.582 kb on - strand, within AO356_18745 at 4212.582 kb on - strand, within AO356_18745 at 4212.708 kb on + strand, within AO356_18745 at 4212.709 kb on - strand, within AO356_18745 at 4212.717 kb on - strand, within AO356_18745 at 4212.717 kb on - strand, within AO356_18745 at 4212.717 kb on - strand, within AO356_18745 at 4212.717 kb on - strand, within AO356_18745 at 4212.809 kb on + strand, within AO356_18745 at 4212.810 kb on - strand, within AO356_18745 at 4212.810 kb on - strand, within AO356_18745 at 4212.961 kb on + strand, within AO356_18745 at 4212.980 kb on + strand, within AO356_18745 at 4213.102 kb on + strand at 4213.119 kb on - strand at 4213.157 kb on + strand at 4213.157 kb on + strand at 4213.157 kb on + strand at 4213.158 kb on - strand at 4213.158 kb on - strand at 4213.158 kb on - strand at 4213.201 kb on + strand at 4213.201 kb on + strand at 4213.202 kb on - strand at 4213.202 kb on - strand at 4213.202 kb on - strand at 4213.217 kb on - strand at 4213.373 kb on + strand, within AO356_18750 at 4213.949 kb on + strand, within AO356_18755 at 4214.111 kb on + strand, within AO356_18755 at 4214.111 kb on + strand, within AO356_18755 at 4214.111 kb on + strand, within AO356_18755 at 4214.111 kb on + strand, within AO356_18755 at 4214.112 kb on - strand, within AO356_18755 at 4214.112 kb on - strand, within AO356_18755 at 4214.113 kb on + strand, within AO356_18755 at 4214.113 kb on + strand, within AO356_18755 at 4214.113 kb on + strand, within AO356_18755 at 4214.114 kb on - strand, within AO356_18755 at 4214.117 kb on + strand, within AO356_18755 at 4214.117 kb on + strand, within AO356_18755 at 4214.117 kb on + strand, within AO356_18755 at 4214.117 kb on + strand, within AO356_18755 at 4214.118 kb on - strand, within AO356_18755 at 4214.118 kb on - strand, within AO356_18755
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 4,211,266 + AO356_18740 0.82 +0.4 4,211,267 - AO356_18740 0.82 -0.7 4,211,267 - AO356_18740 0.82 -0.0 4,211,267 - AO356_18740 0.82 +0.2 4,211,439 - -0.8 4,211,439 - -0.2 4,211,439 - +0.9 4,211,439 - +1.0 4,211,441 + -0.6 4,211,441 + +0.0 4,211,442 - -0.1 4,211,453 + +0.5 4,211,575 - +0.5 4,211,697 + -0.1 4,211,697 + -0.8 4,211,697 + -0.8 4,211,697 + +0.4 4,211,749 + +1.1 4,211,749 + +0.4 4,211,749 + -0.2 4,211,750 - +0.0 4,211,750 - +0.6 4,211,750 - -1.3 4,211,760 + +1.0 4,211,762 + -0.6 4,211,763 - -1.1 4,211,763 - +0.9 4,211,801 + -1.0 4,211,802 - +0.4 4,211,823 + -0.4 4,211,823 + -0.7 4,211,824 - -0.8 4,211,840 - +0.0 4,211,840 - -0.5 4,211,844 - -0.7 4,211,844 - -0.3 4,212,197 + AO356_18745 0.30 +0.9 4,212,197 + AO356_18745 0.30 +0.7 4,212,198 - AO356_18745 0.30 -2.0 4,212,198 - AO356_18745 0.30 -2.0 4,212,205 + AO356_18745 0.31 -0.1 4,212,205 + AO356_18745 0.31 -0.4 4,212,347 + AO356_18745 0.41 -0.9 4,212,422 + AO356_18745 0.47 +0.2 4,212,423 - AO356_18745 0.47 -0.4 4,212,497 + AO356_18745 0.52 +0.0 4,212,497 + AO356_18745 0.52 -0.1 4,212,497 + AO356_18745 0.52 +0.4 4,212,581 + AO356_18745 0.59 -1.7 4,212,581 + AO356_18745 0.59 +0.5 4,212,582 - AO356_18745 0.59 +0.3 4,212,582 - AO356_18745 0.59 +0.1 4,212,582 - AO356_18745 0.59 +0.7 4,212,582 - AO356_18745 0.59 -0.7 4,212,708 + AO356_18745 0.68 +0.3 4,212,709 - AO356_18745 0.68 -1.2 4,212,717 - AO356_18745 0.69 -0.3 4,212,717 - AO356_18745 0.69 -0.1 4,212,717 - AO356_18745 0.69 -0.9 4,212,717 - AO356_18745 0.69 -1.4 4,212,809 + AO356_18745 0.76 -1.7 4,212,810 - AO356_18745 0.76 -0.5 4,212,810 - AO356_18745 0.76 -1.2 4,212,961 + AO356_18745 0.87 +0.4 4,212,980 + AO356_18745 0.88 -1.2 4,213,102 + -0.7 4,213,119 - -0.3 4,213,157 + -0.6 4,213,157 + -0.2 4,213,157 + +0.4 4,213,158 - +0.0 4,213,158 - +0.2 4,213,158 - +0.4 4,213,201 + -1.7 4,213,201 + -0.1 4,213,202 - +0.1 4,213,202 - -0.0 4,213,202 - +0.0 4,213,217 - +0.2 4,213,373 + AO356_18750 0.57 +1.5 4,213,949 + AO356_18755 0.44 +0.4 4,214,111 + AO356_18755 0.60 +0.2 4,214,111 + AO356_18755 0.60 +0.4 4,214,111 + AO356_18755 0.60 -0.2 4,214,111 + AO356_18755 0.60 +1.0 4,214,112 - AO356_18755 0.60 +1.0 4,214,112 - AO356_18755 0.60 +0.8 4,214,113 + AO356_18755 0.60 +0.3 4,214,113 + AO356_18755 0.60 +0.4 4,214,113 + AO356_18755 0.60 +0.6 4,214,114 - AO356_18755 0.60 -0.2 4,214,117 + AO356_18755 0.60 +0.4 4,214,117 + AO356_18755 0.60 +0.4 4,214,117 + AO356_18755 0.60 -0.4 4,214,117 + AO356_18755 0.60 +0.3 4,214,118 - AO356_18755 0.61 -0.6 4,214,118 - AO356_18755 0.61 +0.3
Or see this region's nucleotide sequence