Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_14330 and AO356_14335 are separated by 116 nucleotides AO356_14335 and AO356_14340 overlap by 4 nucleotides AO356_14340 and AO356_14345 overlap by 4 nucleotides
AO356_14330: AO356_14330 - magnesium transporter ApaG, at 3,258,743 to 3,259,123
_14330
AO356_14335: AO356_14335 - rRNA methyltransferase, at 3,259,240 to 3,260,058
_14335
AO356_14340: AO356_14340 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 3,260,055 to 3,261,044
_14340
AO356_14345: AO356_14345 - molecular chaperone SurA, at 3,261,041 to 3,262,321
_14345
Position (kb)
3260
3261
3262 Strain fitness (log2 ratio)
-1
0
1 at 3259.130 kb on - strand at 3259.130 kb on - strand at 3259.130 kb on - strand at 3259.130 kb on - strand at 3259.130 kb on - strand at 3259.130 kb on - strand at 3259.138 kb on - strand at 3259.179 kb on + strand at 3259.179 kb on + strand at 3259.180 kb on - strand at 3259.180 kb on - strand at 3259.180 kb on - strand at 3259.180 kb on - strand at 3259.188 kb on + strand at 3259.195 kb on + strand at 3259.198 kb on + strand at 3259.199 kb on - strand at 3259.199 kb on - strand at 3259.199 kb on - strand at 3259.214 kb on - strand at 3259.294 kb on + strand at 3259.327 kb on + strand, within AO356_14335 at 3259.328 kb on - strand, within AO356_14335 at 3259.484 kb on - strand, within AO356_14335 at 3259.484 kb on - strand, within AO356_14335 at 3259.572 kb on - strand, within AO356_14335 at 3259.721 kb on + strand, within AO356_14335 at 3259.722 kb on - strand, within AO356_14335 at 3259.722 kb on - strand, within AO356_14335 at 3259.722 kb on - strand, within AO356_14335 at 3259.722 kb on - strand, within AO356_14335 at 3259.770 kb on + strand, within AO356_14335 at 3260.045 kb on + strand at 3260.046 kb on - strand at 3260.058 kb on + strand at 3260.058 kb on + strand at 3260.059 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 3,259,130 - +0.2 3,259,130 - +1.2 3,259,130 - +0.0 3,259,130 - -0.4 3,259,130 - -0.3 3,259,130 - +0.8 3,259,138 - -1.0 3,259,179 + +0.5 3,259,179 + +0.5 3,259,180 - +0.2 3,259,180 - +0.6 3,259,180 - -0.8 3,259,180 - +0.9 3,259,188 + -0.5 3,259,195 + +1.1 3,259,198 + -0.4 3,259,199 - -0.1 3,259,199 - -1.3 3,259,199 - +1.4 3,259,214 - -0.9 3,259,294 + +0.2 3,259,327 + AO356_14335 0.11 +0.5 3,259,328 - AO356_14335 0.11 +1.4 3,259,484 - AO356_14335 0.30 -0.6 3,259,484 - AO356_14335 0.30 +1.4 3,259,572 - AO356_14335 0.41 +0.3 3,259,721 + AO356_14335 0.59 -1.1 3,259,722 - AO356_14335 0.59 -0.6 3,259,722 - AO356_14335 0.59 +0.2 3,259,722 - AO356_14335 0.59 +0.5 3,259,722 - AO356_14335 0.59 +0.7 3,259,770 + AO356_14335 0.65 +1.0 3,260,045 + +0.2 3,260,046 - +0.7 3,260,058 + -0.5 3,260,058 + +0.5 3,260,059 - -0.6
Or see this region's nucleotide sequence