Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06060 and AO356_06065 are separated by 275 nucleotides AO356_06065 and AO356_06070 are separated by 32 nucleotides
AO356_06060: AO356_06060 - sodium:proton antiporter, at 1,344,838 to 1,346,484
_06060
AO356_06065: AO356_06065 - ArsC family transcriptional regulator, at 1,346,760 to 1,347,122
_06065
AO356_06070: AO356_06070 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 1,347,155 to 1,348,189
_06070
Position (kb)
1346
1347
1348 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1345.799 kb on + strand, within AO356_06060 at 1345.799 kb on + strand, within AO356_06060 at 1345.799 kb on + strand, within AO356_06060 at 1345.799 kb on + strand, within AO356_06060 at 1345.799 kb on + strand, within AO356_06060 at 1345.800 kb on - strand, within AO356_06060 at 1345.800 kb on - strand, within AO356_06060 at 1345.800 kb on - strand, within AO356_06060 at 1345.800 kb on - strand, within AO356_06060 at 1345.800 kb on - strand, within AO356_06060 at 1345.800 kb on - strand, within AO356_06060 at 1346.160 kb on + strand, within AO356_06060 at 1346.187 kb on - strand, within AO356_06060 at 1346.392 kb on + strand at 1346.392 kb on + strand at 1346.469 kb on + strand at 1346.469 kb on + strand at 1346.470 kb on - strand at 1346.471 kb on + strand at 1346.471 kb on + strand at 1346.471 kb on + strand at 1346.471 kb on + strand at 1346.472 kb on - strand at 1346.472 kb on - strand at 1346.472 kb on - strand at 1346.472 kb on - strand at 1346.472 kb on - strand at 1346.472 kb on - strand at 1346.472 kb on - strand at 1346.472 kb on - strand at 1346.472 kb on - strand at 1346.472 kb on - strand at 1346.543 kb on - strand at 1346.543 kb on - strand at 1346.543 kb on - strand at 1346.543 kb on - strand at 1346.545 kb on + strand at 1346.546 kb on - strand at 1346.559 kb on + strand at 1346.559 kb on + strand at 1346.560 kb on - strand at 1346.560 kb on - strand at 1346.571 kb on + strand at 1346.577 kb on + strand at 1346.577 kb on + strand at 1346.577 kb on + strand at 1346.577 kb on + strand at 1346.578 kb on - strand at 1346.578 kb on - strand at 1346.578 kb on - strand at 1346.578 kb on - strand at 1346.593 kb on + strand at 1346.593 kb on + strand at 1346.594 kb on - strand at 1346.597 kb on - strand at 1346.714 kb on + strand at 1346.714 kb on + strand at 1346.714 kb on + strand at 1346.715 kb on - strand at 1346.715 kb on - strand at 1346.715 kb on - strand at 1346.730 kb on - strand at 1346.730 kb on - strand at 1346.856 kb on + strand, within AO356_06065 at 1346.871 kb on + strand, within AO356_06065 at 1346.871 kb on + strand, within AO356_06065 at 1347.102 kb on + strand at 1347.102 kb on + strand at 1347.102 kb on + strand at 1347.120 kb on + strand at 1347.120 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 1,345,799 + AO356_06060 0.58 +0.4 1,345,799 + AO356_06060 0.58 -0.5 1,345,799 + AO356_06060 0.58 +0.4 1,345,799 + AO356_06060 0.58 +0.7 1,345,799 + AO356_06060 0.58 -0.4 1,345,800 - AO356_06060 0.58 -0.0 1,345,800 - AO356_06060 0.58 -0.8 1,345,800 - AO356_06060 0.58 +0.2 1,345,800 - AO356_06060 0.58 -0.9 1,345,800 - AO356_06060 0.58 +0.9 1,345,800 - AO356_06060 0.58 +0.5 1,346,160 + AO356_06060 0.80 -2.0 1,346,187 - AO356_06060 0.82 +0.9 1,346,392 + -1.3 1,346,392 + -0.9 1,346,469 + -0.9 1,346,469 + -1.0 1,346,470 - +1.6 1,346,471 + -1.5 1,346,471 + +0.0 1,346,471 + -0.7 1,346,471 + -0.3 1,346,472 - +0.4 1,346,472 - +0.9 1,346,472 - +0.1 1,346,472 - +0.6 1,346,472 - -0.3 1,346,472 - +1.8 1,346,472 - +2.2 1,346,472 - +0.5 1,346,472 - +0.7 1,346,472 - +1.3 1,346,543 - +0.8 1,346,543 - +2.2 1,346,543 - +0.4 1,346,543 - +0.9 1,346,545 + -1.3 1,346,546 - +1.3 1,346,559 + -1.1 1,346,559 + -0.3 1,346,560 - +0.9 1,346,560 - +0.4 1,346,571 + -1.4 1,346,577 + -2.1 1,346,577 + -1.4 1,346,577 + -1.5 1,346,577 + -0.8 1,346,578 - +0.5 1,346,578 - +0.8 1,346,578 - +0.7 1,346,578 - -0.2 1,346,593 + +0.8 1,346,593 + -0.8 1,346,594 - +0.0 1,346,597 - +0.1 1,346,714 + -1.0 1,346,714 + -3.1 1,346,714 + -1.3 1,346,715 - -1.2 1,346,715 - +0.1 1,346,715 - -0.5 1,346,730 - -1.1 1,346,730 - +0.8 1,346,856 + AO356_06065 0.26 -0.9 1,346,871 + AO356_06065 0.31 -1.2 1,346,871 + AO356_06065 0.31 -0.2 1,347,102 + +0.1 1,347,102 + -1.3 1,347,102 + -1.2 1,347,120 + -1.5 1,347,120 + -1.5
Or see this region's nucleotide sequence