Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_00540 and AO356_00545 are separated by 156 nucleotides AO356_00545 and AO356_00550 are separated by 126 nucleotides AO356_00550 and AO356_00555 are separated by 546 nucleotides
AO356_00540: AO356_00540 - peptidylprolyl isomerase, at 112,795 to 115,086
_00540
AO356_00545: AO356_00545 - methionine synthase, at 115,243 to 118,953
_00545
AO356_00550: AO356_00550 - hypothetical protein, at 119,080 to 119,298
_00550
AO356_00555: AO356_00555 - sulfite reductase, at 119,845 to 121,503
_00555
Position (kb) 115
116
117
118
119 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 114.263 kb on + strand, within AO356_00540 at 114.263 kb on + strand, within AO356_00540 at 114.263 kb on + strand, within AO356_00540 at 114.263 kb on + strand, within AO356_00540 at 114.263 kb on + strand, within AO356_00540 at 114.334 kb on - strand, within AO356_00540 at 114.383 kb on + strand, within AO356_00540 at 114.383 kb on + strand, within AO356_00540 at 114.383 kb on + strand, within AO356_00540 at 114.384 kb on - strand, within AO356_00540 at 114.384 kb on - strand, within AO356_00540 at 114.384 kb on - strand, within AO356_00540 at 114.384 kb on - strand, within AO356_00540 at 114.387 kb on + strand, within AO356_00540 at 114.388 kb on - strand, within AO356_00540 at 114.388 kb on - strand, within AO356_00540 at 114.388 kb on - strand, within AO356_00540 at 114.388 kb on - strand, within AO356_00540 at 114.388 kb on - strand, within AO356_00540 at 114.560 kb on + strand, within AO356_00540 at 114.561 kb on - strand, within AO356_00540 at 114.623 kb on + strand, within AO356_00540 at 114.717 kb on + strand, within AO356_00540 at 114.717 kb on + strand, within AO356_00540 at 114.785 kb on + strand, within AO356_00540 at 114.827 kb on + strand, within AO356_00540 at 114.827 kb on + strand, within AO356_00540 at 114.872 kb on + strand at 114.872 kb on + strand at 114.872 kb on + strand at 114.872 kb on + strand at 114.872 kb on + strand at 114.872 kb on + strand at 114.873 kb on - strand at 114.873 kb on - strand at 114.944 kb on + strand at 114.945 kb on - strand at 115.001 kb on + strand at 115.001 kb on + strand at 115.002 kb on - strand at 115.039 kb on - strand at 115.099 kb on + strand at 115.099 kb on + strand at 115.100 kb on - strand at 115.106 kb on + strand at 115.107 kb on - strand at 115.107 kb on - strand at 115.121 kb on - strand at 115.216 kb on + strand at 115.216 kb on + strand at 115.217 kb on - strand at 115.217 kb on - strand at 115.217 kb on - strand at 115.236 kb on + strand at 115.236 kb on + strand at 115.236 kb on + strand at 115.236 kb on + strand at 115.237 kb on - strand at 115.237 kb on - strand at 115.237 kb on - strand at 115.243 kb on - strand at 115.243 kb on - strand at 115.243 kb on - strand at 115.267 kb on + strand at 115.267 kb on + strand at 115.267 kb on + strand at 115.268 kb on - strand at 115.340 kb on - strand at 115.340 kb on - strand at 115.340 kb on - strand at 115.360 kb on + strand at 115.532 kb on - strand at 115.553 kb on - strand at 115.738 kb on + strand, within AO356_00545 at 115.739 kb on - strand, within AO356_00545 at 116.057 kb on + strand, within AO356_00545 at 116.102 kb on - strand, within AO356_00545 at 116.390 kb on - strand, within AO356_00545 at 116.390 kb on - strand, within AO356_00545 at 116.390 kb on - strand, within AO356_00545 at 116.390 kb on - strand, within AO356_00545 at 116.390 kb on - strand, within AO356_00545 at 116.677 kb on + strand, within AO356_00545 at 116.863 kb on + strand, within AO356_00545 at 116.863 kb on + strand, within AO356_00545 at 116.863 kb on + strand, within AO356_00545 at 116.863 kb on + strand, within AO356_00545 at 116.864 kb on - strand, within AO356_00545 at 116.864 kb on - strand, within AO356_00545 at 116.864 kb on - strand, within AO356_00545 at 116.864 kb on - strand, within AO356_00545 at 116.864 kb on - strand, within AO356_00545 at 116.893 kb on + strand, within AO356_00545 at 117.007 kb on + strand, within AO356_00545 at 117.008 kb on - strand, within AO356_00545 at 117.008 kb on - strand, within AO356_00545 at 117.065 kb on - strand, within AO356_00545 at 117.065 kb on - strand, within AO356_00545 at 117.163 kb on + strand, within AO356_00545 at 117.163 kb on + strand, within AO356_00545 at 117.163 kb on + strand, within AO356_00545 at 117.163 kb on + strand, within AO356_00545 at 117.796 kb on + strand, within AO356_00545 at 117.796 kb on + strand, within AO356_00545 at 117.796 kb on + strand, within AO356_00545 at 117.797 kb on - strand, within AO356_00545 at 117.797 kb on - strand, within AO356_00545 at 117.817 kb on + strand, within AO356_00545 at 117.818 kb on - strand, within AO356_00545 at 117.818 kb on - strand, within AO356_00545 at 117.818 kb on - strand, within AO356_00545 at 117.910 kb on + strand, within AO356_00545 at 117.910 kb on + strand, within AO356_00545 at 117.911 kb on - strand, within AO356_00545 at 118.084 kb on + strand, within AO356_00545 at 118.084 kb on + strand, within AO356_00545 at 118.085 kb on - strand, within AO356_00545 at 118.133 kb on - strand, within AO356_00545 at 118.133 kb on - strand, within AO356_00545 at 118.183 kb on + strand, within AO356_00545 at 118.184 kb on - strand, within AO356_00545 at 118.423 kb on + strand, within AO356_00545 at 118.423 kb on + strand, within AO356_00545 at 118.594 kb on + strand at 118.643 kb on - strand at 118.643 kb on - strand at 118.777 kb on + strand at 118.778 kb on - strand at 118.838 kb on - strand at 118.879 kb on + strand at 118.879 kb on + strand at 118.951 kb on + strand at 118.951 kb on + strand at 118.951 kb on + strand at 118.951 kb on + strand at 118.951 kb on + strand at 118.952 kb on - strand at 118.952 kb on - strand at 118.952 kb on - strand at 118.952 kb on - strand at 118.952 kb on - strand at 118.952 kb on - strand at 119.044 kb on + strand at 119.044 kb on + strand at 119.044 kb on + strand at 119.044 kb on + strand at 119.045 kb on - strand at 119.045 kb on - strand at 119.045 kb on - strand at 119.045 kb on - strand at 119.045 kb on - strand at 119.079 kb on + strand at 119.079 kb on + strand at 119.079 kb on + strand at 119.080 kb on - strand at 119.080 kb on - strand at 119.296 kb on + strand at 119.296 kb on + strand at 119.297 kb on - strand at 119.297 kb on - strand at 119.297 kb on - strand at 119.297 kb on - strand at 119.297 kb on - strand at 119.441 kb on + strand at 119.441 kb on + strand at 119.441 kb on + strand at 119.485 kb on - strand at 119.517 kb on + strand at 119.517 kb on + strand at 119.517 kb on + strand at 119.517 kb on + strand at 119.517 kb on + strand at 119.517 kb on + strand at 119.518 kb on - strand at 119.607 kb on + strand at 119.607 kb on + strand at 119.608 kb on - strand at 119.626 kb on - strand at 119.648 kb on + strand at 119.683 kb on - strand at 119.707 kb on + strand at 119.721 kb on + strand at 119.721 kb on + strand at 119.721 kb on + strand at 119.721 kb on + strand at 119.721 kb on + strand at 119.722 kb on - strand at 119.722 kb on - strand at 119.722 kb on - strand at 119.722 kb on - strand at 119.740 kb on + strand at 119.741 kb on - strand at 119.842 kb on + strand at 119.842 kb on + strand at 119.842 kb on + strand at 119.842 kb on + strand at 119.842 kb on + strand at 119.842 kb on + strand at 119.842 kb on + strand at 119.843 kb on - strand at 119.843 kb on - strand at 119.843 kb on - strand at 119.843 kb on - strand at 119.843 kb on - strand at 119.843 kb on - strand at 119.843 kb on - strand at 119.843 kb on - strand at 119.843 kb on - strand at 119.843 kb on - strand at 119.844 kb on + strand at 119.844 kb on + strand at 119.844 kb on + strand at 119.844 kb on + strand at 119.844 kb on + strand at 119.844 kb on + strand at 119.844 kb on + strand at 119.844 kb on + strand at 119.844 kb on + strand at 119.844 kb on + strand at 119.844 kb on + strand at 119.844 kb on + strand at 119.844 kb on + strand at 119.844 kb on + strand at 119.844 kb on + strand at 119.845 kb on - strand at 119.845 kb on - strand at 119.845 kb on - strand at 119.845 kb on - strand at 119.845 kb on - strand at 119.845 kb on - strand at 119.845 kb on - strand at 119.845 kb on - strand at 119.845 kb on - strand at 119.845 kb on - strand at 119.845 kb on - strand at 119.845 kb on - strand at 119.848 kb on + strand at 119.848 kb on + strand at 119.848 kb on + strand at 119.848 kb on + strand at 119.848 kb on + strand at 119.848 kb on + strand at 119.848 kb on + strand at 119.848 kb on + strand at 119.848 kb on + strand at 119.849 kb on - strand at 119.849 kb on - strand at 119.849 kb on - strand at 119.849 kb on - strand at 119.849 kb on - strand at 119.852 kb on + strand at 119.852 kb on + strand at 119.852 kb on + strand at 119.852 kb on + strand at 119.852 kb on + strand at 119.852 kb on + strand at 119.852 kb on + strand at 119.853 kb on - strand at 119.853 kb on - strand at 119.853 kb on - strand at 119.853 kb on - strand at 119.853 kb on - strand at 119.853 kb on - strand at 119.854 kb on + strand at 119.855 kb on - strand at 119.855 kb on - strand at 119.864 kb on - strand at 119.920 kb on + strand at 119.920 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 114,263 + AO356_00540 0.64 -0.0 114,263 + AO356_00540 0.64 +0.6 114,263 + AO356_00540 0.64 -0.3 114,263 + AO356_00540 0.64 +0.2 114,263 + AO356_00540 0.64 +0.5 114,334 - AO356_00540 0.67 -0.2 114,383 + AO356_00540 0.69 +0.2 114,383 + AO356_00540 0.69 +0.4 114,383 + AO356_00540 0.69 +0.1 114,384 - AO356_00540 0.69 -0.3 114,384 - AO356_00540 0.69 +1.0 114,384 - AO356_00540 0.69 -1.1 114,384 - AO356_00540 0.69 -0.4 114,387 + AO356_00540 0.69 +0.2 114,388 - AO356_00540 0.70 +0.2 114,388 - AO356_00540 0.70 +0.3 114,388 - AO356_00540 0.70 -0.0 114,388 - AO356_00540 0.70 +0.5 114,388 - AO356_00540 0.70 -0.1 114,560 + AO356_00540 0.77 +0.5 114,561 - AO356_00540 0.77 -0.2 114,623 + AO356_00540 0.80 +0.1 114,717 + AO356_00540 0.84 -0.5 114,717 + AO356_00540 0.84 -1.0 114,785 + AO356_00540 0.87 +0.6 114,827 + AO356_00540 0.89 -0.2 114,827 + AO356_00540 0.89 +0.0 114,872 + +0.6 114,872 + -0.1 114,872 + -1.0 114,872 + +1.3 114,872 + +0.6 114,872 + -0.3 114,873 - +1.2 114,873 - +0.6 114,944 + +0.4 114,945 - +0.3 115,001 + -0.0 115,001 + +0.3 115,002 - -0.6 115,039 - +0.1 115,099 + +0.2 115,099 + +0.2 115,100 - +0.2 115,106 + +0.3 115,107 - -0.8 115,107 - +1.4 115,121 - -0.9 115,216 + +0.6 115,216 + +1.9 115,217 - -0.2 115,217 - -1.1 115,217 - -0.7 115,236 + -0.1 115,236 + +0.5 115,236 + -2.9 115,236 + +0.4 115,237 - -0.1 115,237 - +0.1 115,237 - -0.8 115,243 - -1.1 115,243 - -0.5 115,243 - +0.1 115,267 + -1.8 115,267 + -0.2 115,267 + -1.6 115,268 - -1.3 115,340 - -0.5 115,340 - -1.5 115,340 - +0.1 115,360 + -0.4 115,532 - -2.0 115,553 - +0.1 115,738 + AO356_00545 0.13 -1.8 115,739 - AO356_00545 0.13 -1.0 116,057 + AO356_00545 0.22 -0.6 116,102 - AO356_00545 0.23 -0.0 116,390 - AO356_00545 0.31 -1.1 116,390 - AO356_00545 0.31 -1.0 116,390 - AO356_00545 0.31 -0.3 116,390 - AO356_00545 0.31 -0.0 116,390 - AO356_00545 0.31 -0.1 116,677 + AO356_00545 0.39 +1.1 116,863 + AO356_00545 0.44 -1.1 116,863 + AO356_00545 0.44 -0.9 116,863 + AO356_00545 0.44 -0.1 116,863 + AO356_00545 0.44 -0.6 116,864 - AO356_00545 0.44 -0.8 116,864 - AO356_00545 0.44 +0.3 116,864 - AO356_00545 0.44 -1.0 116,864 - AO356_00545 0.44 +0.3 116,864 - AO356_00545 0.44 +0.0 116,893 + AO356_00545 0.44 +0.5 117,007 + AO356_00545 0.48 -1.8 117,008 - AO356_00545 0.48 +0.5 117,008 - AO356_00545 0.48 -1.3 117,065 - AO356_00545 0.49 -1.5 117,065 - AO356_00545 0.49 +1.3 117,163 + AO356_00545 0.52 +0.1 117,163 + AO356_00545 0.52 -1.3 117,163 + AO356_00545 0.52 -0.8 117,163 + AO356_00545 0.52 +0.2 117,796 + AO356_00545 0.69 -0.1 117,796 + AO356_00545 0.69 -0.6 117,796 + AO356_00545 0.69 +0.9 117,797 - AO356_00545 0.69 -1.9 117,797 - AO356_00545 0.69 +0.2 117,817 + AO356_00545 0.69 -1.1 117,818 - AO356_00545 0.69 -0.4 117,818 - AO356_00545 0.69 -1.6 117,818 - AO356_00545 0.69 -0.3 117,910 + AO356_00545 0.72 -0.6 117,910 + AO356_00545 0.72 -0.4 117,911 - AO356_00545 0.72 -1.9 118,084 + AO356_00545 0.77 -0.3 118,084 + AO356_00545 0.77 -1.3 118,085 - AO356_00545 0.77 -0.2 118,133 - AO356_00545 0.78 +0.3 118,133 - AO356_00545 0.78 -0.6 118,183 + AO356_00545 0.79 -0.5 118,184 - AO356_00545 0.79 -0.4 118,423 + AO356_00545 0.86 -2.4 118,423 + AO356_00545 0.86 -0.1 118,594 + -0.2 118,643 - +0.1 118,643 - -0.2 118,777 + -1.3 118,778 - -0.3 118,838 - -0.5 118,879 + -0.5 118,879 + -1.3 118,951 + -1.7 118,951 + -0.1 118,951 + +0.4 118,951 + +0.3 118,951 + +0.3 118,952 - +0.2 118,952 - -0.6 118,952 - +0.5 118,952 - -1.0 118,952 - -0.4 118,952 - -1.6 119,044 + -0.9 119,044 + +0.4 119,044 + -0.4 119,044 + +0.6 119,045 - -0.8 119,045 - +0.5 119,045 - +0.2 119,045 - -1.7 119,045 - -0.1 119,079 + +1.7 119,079 + -1.7 119,079 + -0.1 119,080 - +0.8 119,080 - +0.1 119,296 + -0.4 119,296 + -0.6 119,297 - -0.2 119,297 - +0.4 119,297 - +0.7 119,297 - +0.5 119,297 - +0.9 119,441 + -0.9 119,441 + +0.5 119,441 + -0.1 119,485 - +0.2 119,517 + -0.0 119,517 + +1.1 119,517 + +1.3 119,517 + +0.9 119,517 + -0.3 119,517 + +0.1 119,518 - +0.1 119,607 + +1.8 119,607 + +0.9 119,608 - -0.1 119,626 - +0.6 119,648 + +0.3 119,683 - -1.5 119,707 + +0.5 119,721 + +0.2 119,721 + +0.4 119,721 + +0.8 119,721 + -0.9 119,721 + -0.0 119,722 - -2.3 119,722 - -2.0 119,722 - -2.6 119,722 - -3.0 119,740 + -0.8 119,741 - -2.2 119,842 + -2.8 119,842 + +0.4 119,842 + -2.3 119,842 + -2.4 119,842 + -2.5 119,842 + -2.5 119,842 + -2.2 119,843 - -2.5 119,843 - -3.0 119,843 - -3.4 119,843 - -1.5 119,843 - -1.8 119,843 - -3.4 119,843 - -1.5 119,843 - -3.0 119,843 - -2.5 119,843 - -1.8 119,844 + -1.5 119,844 + -1.3 119,844 + -3.3 119,844 + -2.4 119,844 + -1.8 119,844 + -2.4 119,844 + -2.1 119,844 + -1.9 119,844 + -2.8 119,844 + -2.6 119,844 + -1.3 119,844 + -2.1 119,844 + -2.4 119,844 + -1.2 119,844 + -3.0 119,845 - -3.2 119,845 - -2.8 119,845 - -4.7 119,845 - -2.2 119,845 - -2.2 119,845 - -1.0 119,845 - -3.4 119,845 - -0.6 119,845 - -1.9 119,845 - -2.1 119,845 - -2.8 119,845 - -1.8 119,848 + -0.8 119,848 + -2.7 119,848 + -3.5 119,848 + -3.0 119,848 + -2.6 119,848 + -2.9 119,848 + -1.3 119,848 + -3.2 119,848 + -3.4 119,849 - -3.0 119,849 - -3.0 119,849 - -2.1 119,849 - -0.5 119,849 - -3.4 119,852 + -4.2 119,852 + -4.1 119,852 + -1.9 119,852 + -3.5 119,852 + -0.5 119,852 + -3.2 119,852 + -2.8 119,853 - -1.5 119,853 - -3.2 119,853 - -1.1 119,853 - -3.1 119,853 - -1.6 119,853 - -1.9 119,854 + -1.8 119,855 - -3.5 119,855 - -3.0 119,864 - -2.2 119,920 + -2.7 119,920 + -2.5
Or see this region's nucleotide sequence