Experiment: D-Mannitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS21405 and EX31_RS21410 are separated by 72 nucleotides EX31_RS21410 and EX31_RS21415 are separated by 129 nucleotides
EX31_RS21405: EX31_RS21405 - erythrose-4-phosphate dehydrogenase, at 20,947 to 21,963
_RS21405
EX31_RS21410: EX31_RS21410 - phosphoglycerate kinase, at 22,036 to 23,199
_RS21410
EX31_RS21415: EX31_RS21415 - class II fructose-bisphosphate aldolase, at 23,329 to 24,408
_RS21415
Position (kb) 22
23
24 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 21.090 kb on + strand, within EX31_RS21405 at 21.090 kb on + strand, within EX31_RS21405 at 21.090 kb on + strand, within EX31_RS21405 at 21.090 kb on + strand, within EX31_RS21405 at 21.090 kb on + strand, within EX31_RS21405 at 21.091 kb on - strand, within EX31_RS21405 at 21.091 kb on - strand, within EX31_RS21405 at 21.091 kb on - strand, within EX31_RS21405 at 21.094 kb on + strand, within EX31_RS21405 at 21.095 kb on - strand, within EX31_RS21405 at 21.151 kb on + strand, within EX31_RS21405 at 21.152 kb on - strand, within EX31_RS21405 at 21.176 kb on + strand, within EX31_RS21405 at 21.176 kb on + strand, within EX31_RS21405 at 21.176 kb on + strand, within EX31_RS21405 at 21.177 kb on - strand, within EX31_RS21405 at 21.177 kb on - strand, within EX31_RS21405 at 21.352 kb on + strand, within EX31_RS21405 at 21.352 kb on + strand, within EX31_RS21405 at 21.352 kb on + strand, within EX31_RS21405 at 21.353 kb on - strand, within EX31_RS21405 at 21.423 kb on + strand, within EX31_RS21405 at 21.423 kb on + strand, within EX31_RS21405 at 21.423 kb on + strand, within EX31_RS21405 at 21.423 kb on + strand, within EX31_RS21405 at 21.423 kb on + strand, within EX31_RS21405 at 21.423 kb on + strand, within EX31_RS21405 at 21.423 kb on + strand, within EX31_RS21405 at 21.423 kb on + strand, within EX31_RS21405 at 21.423 kb on + strand, within EX31_RS21405 at 21.423 kb on + strand, within EX31_RS21405 at 21.423 kb on + strand, within EX31_RS21405 at 21.423 kb on + strand, within EX31_RS21405 at 21.423 kb on + strand, within EX31_RS21405 at 21.423 kb on + strand, within EX31_RS21405 at 21.423 kb on + strand, within EX31_RS21405 at 21.424 kb on - strand, within EX31_RS21405 at 21.424 kb on - strand, within EX31_RS21405 at 21.424 kb on - strand, within EX31_RS21405 at 21.424 kb on - strand, within EX31_RS21405 at 21.424 kb on - strand, within EX31_RS21405 at 21.424 kb on - strand, within EX31_RS21405 at 21.424 kb on - strand, within EX31_RS21405 at 21.424 kb on - strand, within EX31_RS21405 at 21.424 kb on - strand, within EX31_RS21405 at 21.427 kb on - strand, within EX31_RS21405 at 21.427 kb on - strand, within EX31_RS21405 at 21.526 kb on + strand, within EX31_RS21405 at 21.526 kb on + strand, within EX31_RS21405 at 21.526 kb on + strand, within EX31_RS21405 at 21.527 kb on - strand, within EX31_RS21405 at 21.527 kb on - strand, within EX31_RS21405 at 21.527 kb on - strand, within EX31_RS21405 at 21.539 kb on + strand, within EX31_RS21405 at 21.583 kb on - strand, within EX31_RS21405 at 21.692 kb on + strand, within EX31_RS21405 at 21.692 kb on + strand, within EX31_RS21405 at 21.692 kb on + strand, within EX31_RS21405 at 21.692 kb on + strand, within EX31_RS21405 at 21.693 kb on - strand, within EX31_RS21405 at 21.693 kb on - strand, within EX31_RS21405 at 21.693 kb on - strand, within EX31_RS21405 at 21.716 kb on + strand, within EX31_RS21405 at 21.716 kb on + strand, within EX31_RS21405 at 21.768 kb on + strand, within EX31_RS21405 at 21.768 kb on + strand, within EX31_RS21405 at 21.778 kb on + strand, within EX31_RS21405 at 21.780 kb on + strand, within EX31_RS21405 at 21.788 kb on + strand, within EX31_RS21405 at 21.788 kb on + strand, within EX31_RS21405 at 21.788 kb on + strand, within EX31_RS21405 at 21.794 kb on + strand, within EX31_RS21405 at 21.794 kb on + strand, within EX31_RS21405 at 21.794 kb on + strand, within EX31_RS21405 at 21.836 kb on + strand, within EX31_RS21405 at 21.836 kb on + strand, within EX31_RS21405 at 21.836 kb on + strand, within EX31_RS21405 at 21.836 kb on + strand, within EX31_RS21405 at 21.836 kb on + strand, within EX31_RS21405 at 21.857 kb on + strand, within EX31_RS21405 at 21.857 kb on + strand, within EX31_RS21405 at 21.930 kb on + strand at 21.930 kb on + strand at 21.930 kb on + strand at 22.009 kb on + strand at 22.009 kb on + strand at 22.009 kb on + strand at 23.190 kb on + strand at 23.190 kb on + strand at 23.197 kb on + strand at 23.197 kb on + strand at 23.197 kb on + strand at 23.220 kb on + strand at 23.220 kb on + strand at 23.220 kb on + strand at 23.220 kb on + strand at 23.278 kb on + strand at 23.278 kb on + strand at 23.278 kb on + strand at 23.300 kb on + strand at 23.300 kb on + strand at 23.313 kb on + strand at 23.313 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannitol (C) remove 21,090 + EX31_RS21405 0.14 +0.1 21,090 + EX31_RS21405 0.14 -0.6 21,090 + EX31_RS21405 0.14 -1.5 21,090 + EX31_RS21405 0.14 +1.5 21,090 + EX31_RS21405 0.14 -0.5 21,091 - EX31_RS21405 0.14 -1.2 21,091 - EX31_RS21405 0.14 +0.7 21,091 - EX31_RS21405 0.14 -1.5 21,094 + EX31_RS21405 0.14 -1.6 21,095 - EX31_RS21405 0.15 -2.6 21,151 + EX31_RS21405 0.20 -2.4 21,152 - EX31_RS21405 0.20 -0.5 21,176 + EX31_RS21405 0.23 +0.0 21,176 + EX31_RS21405 0.23 +0.9 21,176 + EX31_RS21405 0.23 -1.4 21,177 - EX31_RS21405 0.23 -1.6 21,177 - EX31_RS21405 0.23 -0.5 21,352 + EX31_RS21405 0.40 -1.1 21,352 + EX31_RS21405 0.40 -0.7 21,352 + EX31_RS21405 0.40 +0.2 21,353 - EX31_RS21405 0.40 -1.2 21,423 + EX31_RS21405 0.47 -0.2 21,423 + EX31_RS21405 0.47 -0.5 21,423 + EX31_RS21405 0.47 +0.7 21,423 + EX31_RS21405 0.47 -0.5 21,423 + EX31_RS21405 0.47 +0.5 21,423 + EX31_RS21405 0.47 -0.8 21,423 + EX31_RS21405 0.47 +0.8 21,423 + EX31_RS21405 0.47 -0.3 21,423 + EX31_RS21405 0.47 +0.9 21,423 + EX31_RS21405 0.47 -0.2 21,423 + EX31_RS21405 0.47 +0.2 21,423 + EX31_RS21405 0.47 +0.2 21,423 + EX31_RS21405 0.47 -0.1 21,423 + EX31_RS21405 0.47 +0.1 21,423 + EX31_RS21405 0.47 -0.9 21,424 - EX31_RS21405 0.47 -1.2 21,424 - EX31_RS21405 0.47 -1.9 21,424 - EX31_RS21405 0.47 -0.5 21,424 - EX31_RS21405 0.47 -0.4 21,424 - EX31_RS21405 0.47 +0.5 21,424 - EX31_RS21405 0.47 -0.4 21,424 - EX31_RS21405 0.47 -0.9 21,424 - EX31_RS21405 0.47 -0.3 21,424 - EX31_RS21405 0.47 +0.5 21,427 - EX31_RS21405 0.47 -0.4 21,427 - EX31_RS21405 0.47 +0.9 21,526 + EX31_RS21405 0.57 -0.9 21,526 + EX31_RS21405 0.57 +3.3 21,526 + EX31_RS21405 0.57 +0.9 21,527 - EX31_RS21405 0.57 -0.6 21,527 - EX31_RS21405 0.57 -1.4 21,527 - EX31_RS21405 0.57 -1.1 21,539 + EX31_RS21405 0.58 -0.4 21,583 - EX31_RS21405 0.63 +1.4 21,692 + EX31_RS21405 0.73 -0.3 21,692 + EX31_RS21405 0.73 +0.4 21,692 + EX31_RS21405 0.73 +0.9 21,692 + EX31_RS21405 0.73 +0.1 21,693 - EX31_RS21405 0.73 -2.9 21,693 - EX31_RS21405 0.73 -0.8 21,693 - EX31_RS21405 0.73 -0.2 21,716 + EX31_RS21405 0.76 +1.4 21,716 + EX31_RS21405 0.76 -0.4 21,768 + EX31_RS21405 0.81 -0.4 21,768 + EX31_RS21405 0.81 +0.7 21,778 + EX31_RS21405 0.82 -0.1 21,780 + EX31_RS21405 0.82 -1.6 21,788 + EX31_RS21405 0.83 +1.3 21,788 + EX31_RS21405 0.83 -0.3 21,788 + EX31_RS21405 0.83 +0.5 21,794 + EX31_RS21405 0.83 +0.6 21,794 + EX31_RS21405 0.83 +0.5 21,794 + EX31_RS21405 0.83 +0.4 21,836 + EX31_RS21405 0.87 +0.3 21,836 + EX31_RS21405 0.87 -0.9 21,836 + EX31_RS21405 0.87 +1.4 21,836 + EX31_RS21405 0.87 -1.6 21,836 + EX31_RS21405 0.87 -0.4 21,857 + EX31_RS21405 0.89 -0.2 21,857 + EX31_RS21405 0.89 +1.8 21,930 + +1.0 21,930 + +1.5 21,930 + +0.9 22,009 + -0.0 22,009 + +0.1 22,009 + +1.3 23,190 + -0.9 23,190 + -0.8 23,197 + -0.8 23,197 + -0.2 23,197 + -0.1 23,220 + -1.4 23,220 + +0.3 23,220 + -1.6 23,220 + -1.2 23,278 + -1.0 23,278 + -2.1 23,278 + -1.5 23,300 + -0.6 23,300 + -1.8 23,313 + -1.6 23,313 + -0.6
Or see this region's nucleotide sequence