Experiment: D-Mannitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS20670 and EX31_RS20675 are separated by 352 nucleotides
EX31_RS20670: EX31_RS20670 - RNA chaperone/antiterminator CspA, at 777,427 to 777,639
_RS20670
EX31_RS20675: EX31_RS20675 - DUF1615 domain-containing protein, at 777,992 to 779,098
_RS20675
Position (kb) 777
778 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 776.442 kb on + strand at 776.446 kb on + strand at 776.447 kb on - strand at 776.447 kb on - strand at 776.475 kb on + strand at 776.491 kb on + strand at 776.493 kb on + strand at 776.494 kb on - strand at 776.539 kb on + strand at 776.540 kb on - strand at 776.567 kb on - strand at 776.602 kb on + strand at 776.602 kb on + strand at 776.602 kb on + strand at 776.612 kb on - strand at 776.642 kb on + strand at 776.643 kb on - strand at 776.666 kb on + strand at 776.666 kb on + strand at 776.666 kb on + strand at 776.666 kb on + strand at 776.666 kb on + strand at 776.666 kb on + strand at 776.666 kb on + strand at 776.666 kb on + strand at 776.666 kb on + strand at 776.667 kb on - strand at 776.667 kb on - strand at 776.667 kb on - strand at 776.783 kb on + strand at 776.783 kb on + strand at 776.784 kb on - strand at 776.784 kb on - strand at 776.795 kb on + strand at 776.795 kb on + strand at 776.795 kb on + strand at 776.795 kb on + strand at 776.795 kb on + strand at 776.795 kb on + strand at 776.795 kb on + strand at 776.795 kb on + strand at 776.795 kb on + strand at 776.795 kb on + strand at 776.796 kb on - strand at 776.796 kb on - strand at 776.802 kb on + strand at 776.802 kb on + strand at 776.802 kb on + strand at 776.802 kb on + strand at 776.802 kb on + strand at 776.803 kb on - strand at 776.843 kb on + strand at 776.843 kb on + strand at 776.844 kb on - strand at 776.844 kb on - strand at 776.857 kb on + strand at 776.862 kb on + strand at 776.862 kb on + strand at 776.863 kb on - strand at 776.895 kb on + strand at 776.895 kb on + strand at 776.895 kb on + strand at 776.896 kb on - strand at 776.896 kb on - strand at 776.896 kb on - strand at 776.896 kb on - strand at 776.898 kb on + strand at 776.899 kb on - strand at 776.906 kb on + strand at 776.907 kb on - strand at 776.907 kb on - strand at 776.907 kb on - strand at 776.917 kb on + strand at 777.004 kb on + strand at 777.005 kb on - strand at 777.061 kb on + strand at 777.061 kb on + strand at 777.061 kb on + strand at 777.061 kb on + strand at 777.061 kb on + strand at 777.061 kb on + strand at 777.061 kb on + strand at 777.062 kb on - strand at 777.062 kb on - strand at 777.062 kb on - strand at 777.062 kb on - strand at 777.062 kb on - strand at 777.062 kb on - strand at 777.062 kb on - strand at 777.062 kb on - strand at 777.062 kb on - strand at 777.062 kb on - strand at 777.062 kb on - strand at 777.062 kb on - strand at 777.062 kb on - strand at 777.065 kb on + strand at 777.065 kb on + strand at 777.065 kb on + strand at 777.065 kb on + strand at 777.065 kb on + strand at 777.065 kb on + strand at 777.065 kb on + strand at 777.065 kb on + strand at 777.066 kb on - strand at 777.066 kb on - strand at 777.066 kb on - strand at 777.066 kb on - strand at 777.066 kb on - strand at 777.066 kb on - strand at 777.066 kb on - strand at 777.069 kb on + strand at 777.069 kb on + strand at 777.069 kb on + strand at 777.070 kb on - strand at 777.070 kb on - strand at 777.120 kb on - strand at 777.153 kb on + strand at 777.153 kb on + strand at 777.154 kb on - strand at 777.154 kb on - strand at 777.154 kb on - strand at 777.154 kb on - strand at 777.154 kb on - strand at 777.156 kb on + strand at 777.157 kb on - strand at 777.157 kb on - strand at 777.240 kb on - strand at 777.289 kb on + strand at 777.289 kb on + strand at 777.289 kb on + strand at 777.289 kb on + strand at 777.290 kb on - strand at 777.290 kb on - strand at 777.290 kb on - strand at 777.290 kb on - strand at 777.292 kb on - strand at 777.293 kb on + strand at 777.294 kb on - strand at 777.294 kb on - strand at 777.294 kb on - strand at 777.294 kb on - strand at 777.294 kb on - strand at 777.294 kb on - strand at 777.294 kb on - strand at 777.294 kb on - strand at 777.295 kb on + strand at 777.295 kb on + strand at 777.296 kb on - strand at 777.296 kb on - strand at 777.296 kb on - strand at 777.296 kb on - strand at 777.296 kb on - strand at 777.338 kb on - strand at 777.338 kb on - strand at 777.359 kb on - strand at 777.359 kb on - strand at 777.429 kb on - strand at 777.614 kb on - strand, within EX31_RS20670 at 777.631 kb on - strand at 777.631 kb on - strand at 777.631 kb on - strand at 777.634 kb on - strand at 777.639 kb on + strand at 777.639 kb on + strand at 777.639 kb on + strand at 777.640 kb on - strand at 777.640 kb on - strand at 777.640 kb on - strand at 777.662 kb on - strand at 777.667 kb on - strand at 777.667 kb on - strand at 777.686 kb on + strand at 777.686 kb on + strand at 777.686 kb on + strand at 777.686 kb on + strand at 777.686 kb on + strand at 777.687 kb on - strand at 777.687 kb on - strand at 777.687 kb on - strand at 777.687 kb on - strand at 777.687 kb on - strand at 777.687 kb on - strand at 777.712 kb on - strand at 777.756 kb on - strand at 777.756 kb on - strand at 777.756 kb on - strand at 777.795 kb on - strand at 777.799 kb on - strand at 777.799 kb on - strand at 777.799 kb on - strand at 777.799 kb on - strand at 777.799 kb on - strand at 777.799 kb on - strand at 777.803 kb on - strand at 777.803 kb on - strand at 777.803 kb on - strand at 777.810 kb on - strand at 777.829 kb on + strand at 777.829 kb on + strand at 777.830 kb on - strand at 777.833 kb on + strand at 777.879 kb on - strand at 777.880 kb on + strand at 777.941 kb on - strand at 777.987 kb on - strand at 778.057 kb on + strand at 778.139 kb on - strand, within EX31_RS20675 at 778.165 kb on - strand, within EX31_RS20675 at 778.285 kb on + strand, within EX31_RS20675 at 778.297 kb on - strand, within EX31_RS20675 at 778.300 kb on + strand, within EX31_RS20675 at 778.301 kb on - strand, within EX31_RS20675 at 778.301 kb on - strand, within EX31_RS20675 at 778.301 kb on - strand, within EX31_RS20675 at 778.301 kb on - strand, within EX31_RS20675 at 778.301 kb on - strand, within EX31_RS20675 at 778.301 kb on - strand, within EX31_RS20675 at 778.301 kb on - strand, within EX31_RS20675 at 778.342 kb on + strand, within EX31_RS20675 at 778.342 kb on + strand, within EX31_RS20675 at 778.343 kb on - strand, within EX31_RS20675 at 778.343 kb on - strand, within EX31_RS20675 at 778.343 kb on - strand, within EX31_RS20675 at 778.380 kb on + strand, within EX31_RS20675 at 778.381 kb on - strand, within EX31_RS20675 at 778.381 kb on - strand, within EX31_RS20675 at 778.393 kb on + strand, within EX31_RS20675 at 778.393 kb on + strand, within EX31_RS20675 at 778.393 kb on + strand, within EX31_RS20675 at 778.394 kb on - strand, within EX31_RS20675 at 778.394 kb on - strand, within EX31_RS20675 at 778.410 kb on + strand, within EX31_RS20675 at 778.410 kb on + strand, within EX31_RS20675 at 778.412 kb on + strand, within EX31_RS20675 at 778.412 kb on + strand, within EX31_RS20675 at 778.413 kb on - strand, within EX31_RS20675 at 778.425 kb on + strand, within EX31_RS20675 at 778.425 kb on + strand, within EX31_RS20675 at 778.426 kb on - strand, within EX31_RS20675 at 778.464 kb on + strand, within EX31_RS20675 at 778.464 kb on + strand, within EX31_RS20675 at 778.465 kb on - strand, within EX31_RS20675 at 778.516 kb on + strand, within EX31_RS20675 at 778.517 kb on - strand, within EX31_RS20675 at 778.519 kb on - strand, within EX31_RS20675 at 778.580 kb on - strand, within EX31_RS20675 at 778.627 kb on + strand, within EX31_RS20675 at 778.627 kb on + strand, within EX31_RS20675 at 778.627 kb on + strand, within EX31_RS20675 at 778.628 kb on - strand, within EX31_RS20675 at 778.628 kb on - strand, within EX31_RS20675 at 778.628 kb on - strand, within EX31_RS20675 at 778.628 kb on - strand, within EX31_RS20675
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannitol (C) remove 776,442 + -0.3 776,446 + +0.1 776,447 - +0.7 776,447 - -0.3 776,475 + +0.1 776,491 + +0.1 776,493 + -1.7 776,494 - +1.0 776,539 + -0.3 776,540 - +0.3 776,567 - -0.0 776,602 + -0.4 776,602 + +1.8 776,602 + -0.0 776,612 - +0.2 776,642 + +0.7 776,643 - -1.2 776,666 + -0.0 776,666 + -1.3 776,666 + +0.4 776,666 + -1.0 776,666 + +1.0 776,666 + -0.3 776,666 + +0.2 776,666 + +0.6 776,666 + -0.6 776,667 - +0.4 776,667 - +0.2 776,667 - -2.6 776,783 + -1.2 776,783 + -0.3 776,784 - +1.0 776,784 - +2.0 776,795 + -0.1 776,795 + +1.4 776,795 + +1.3 776,795 + +2.0 776,795 + +1.2 776,795 + -0.3 776,795 + -0.9 776,795 + +0.1 776,795 + +0.8 776,795 + +1.8 776,796 - -0.3 776,796 - +2.6 776,802 + -0.4 776,802 + -0.3 776,802 + +0.7 776,802 + -3.5 776,802 + +0.6 776,803 - -0.2 776,843 + +0.4 776,843 + -0.0 776,844 - +1.0 776,844 - -0.2 776,857 + +0.8 776,862 + -0.3 776,862 + +0.6 776,863 - -0.2 776,895 + -0.6 776,895 + +0.6 776,895 + -2.1 776,896 - +1.3 776,896 - -0.0 776,896 - +0.2 776,896 - +1.0 776,898 + +0.5 776,899 - -0.2 776,906 + -0.4 776,907 - -0.6 776,907 - -0.3 776,907 - -1.2 776,917 + -2.0 777,004 + +0.5 777,005 - -1.3 777,061 + +0.3 777,061 + +2.6 777,061 + -1.0 777,061 + +0.4 777,061 + +0.8 777,061 + +2.0 777,061 + +0.5 777,062 - +1.0 777,062 - -0.8 777,062 - -0.6 777,062 - +2.6 777,062 - -0.3 777,062 - -1.0 777,062 - -1.1 777,062 - +1.4 777,062 - +1.0 777,062 - +1.0 777,062 - -2.5 777,062 - -1.2 777,062 - -0.3 777,065 + +2.8 777,065 + +1.5 777,065 + +0.2 777,065 + -0.1 777,065 + +0.1 777,065 + -1.4 777,065 + +1.0 777,065 + +0.4 777,066 - +0.5 777,066 - +1.0 777,066 - -1.8 777,066 - +2.3 777,066 - -1.0 777,066 - +2.0 777,066 - +0.3 777,069 + -0.4 777,069 + -0.2 777,069 + +0.4 777,070 - +1.0 777,070 - +0.7 777,120 - +1.0 777,153 + -0.4 777,153 + +0.6 777,154 - +1.6 777,154 - +1.0 777,154 - -0.4 777,154 - -0.6 777,154 - -2.7 777,156 + +1.0 777,157 - +0.3 777,157 - +0.7 777,240 - -0.2 777,289 + -0.0 777,289 + -0.9 777,289 + -0.4 777,289 + +0.8 777,290 - +0.3 777,290 - -0.5 777,290 - +0.3 777,290 - +0.3 777,292 - +0.4 777,293 + +0.2 777,294 - -0.6 777,294 - -0.4 777,294 - -0.8 777,294 - +0.1 777,294 - +0.4 777,294 - +2.0 777,294 - -0.1 777,294 - -0.3 777,295 + +1.3 777,295 + +1.0 777,296 - +0.8 777,296 - -0.2 777,296 - -0.3 777,296 - +0.2 777,296 - +1.0 777,338 - +0.7 777,338 - -1.1 777,359 - -0.3 777,359 - -0.3 777,429 - +0.8 777,614 - EX31_RS20670 0.88 -0.8 777,631 - +0.3 777,631 - +0.4 777,631 - -2.1 777,634 - -0.1 777,639 + -0.8 777,639 + +1.0 777,639 + +1.2 777,640 - +1.0 777,640 - -1.2 777,640 - -0.5 777,662 - +1.0 777,667 - -1.7 777,667 - -0.5 777,686 + -0.1 777,686 + -0.9 777,686 + -1.8 777,686 + -0.2 777,686 + +0.3 777,687 - +0.2 777,687 - -0.6 777,687 - -1.0 777,687 - +0.4 777,687 - +0.6 777,687 - +0.9 777,712 - +1.3 777,756 - -0.3 777,756 - -0.2 777,756 - +0.5 777,795 - -0.4 777,799 - +1.0 777,799 - -0.5 777,799 - +0.1 777,799 - -0.4 777,799 - -0.5 777,799 - -0.4 777,803 - +0.5 777,803 - -0.2 777,803 - +1.5 777,810 - -1.2 777,829 + +0.6 777,829 + +0.1 777,830 - -0.0 777,833 + +0.4 777,879 - +0.5 777,880 + -0.0 777,941 - +0.7 777,987 - +0.4 778,057 + -0.1 778,139 - EX31_RS20675 0.13 +1.5 778,165 - EX31_RS20675 0.16 -0.2 778,285 + EX31_RS20675 0.26 +1.8 778,297 - EX31_RS20675 0.28 -0.5 778,300 + EX31_RS20675 0.28 -0.4 778,301 - EX31_RS20675 0.28 +0.2 778,301 - EX31_RS20675 0.28 +2.4 778,301 - EX31_RS20675 0.28 +0.8 778,301 - EX31_RS20675 0.28 -1.0 778,301 - EX31_RS20675 0.28 -0.8 778,301 - EX31_RS20675 0.28 +0.5 778,301 - EX31_RS20675 0.28 -0.8 778,342 + EX31_RS20675 0.32 -1.8 778,342 + EX31_RS20675 0.32 -0.0 778,343 - EX31_RS20675 0.32 +0.4 778,343 - EX31_RS20675 0.32 -0.9 778,343 - EX31_RS20675 0.32 -2.5 778,380 + EX31_RS20675 0.35 +1.0 778,381 - EX31_RS20675 0.35 -1.3 778,381 - EX31_RS20675 0.35 -0.9 778,393 + EX31_RS20675 0.36 +0.4 778,393 + EX31_RS20675 0.36 -1.3 778,393 + EX31_RS20675 0.36 -0.2 778,394 - EX31_RS20675 0.36 -0.0 778,394 - EX31_RS20675 0.36 +1.1 778,410 + EX31_RS20675 0.38 +0.5 778,410 + EX31_RS20675 0.38 +0.3 778,412 + EX31_RS20675 0.38 -0.5 778,412 + EX31_RS20675 0.38 +0.4 778,413 - EX31_RS20675 0.38 -0.2 778,425 + EX31_RS20675 0.39 +1.4 778,425 + EX31_RS20675 0.39 +0.1 778,426 - EX31_RS20675 0.39 +0.2 778,464 + EX31_RS20675 0.43 -0.2 778,464 + EX31_RS20675 0.43 -0.9 778,465 - EX31_RS20675 0.43 +1.0 778,516 + EX31_RS20675 0.47 +0.3 778,517 - EX31_RS20675 0.47 +1.3 778,519 - EX31_RS20675 0.48 -0.0 778,580 - EX31_RS20675 0.53 -1.0 778,627 + EX31_RS20675 0.57 -2.0 778,627 + EX31_RS20675 0.57 +1.5 778,627 + EX31_RS20675 0.57 +1.0 778,628 - EX31_RS20675 0.57 -1.0 778,628 - EX31_RS20675 0.57 +0.5 778,628 - EX31_RS20675 0.57 +0.4 778,628 - EX31_RS20675 0.57 -0.3
Or see this region's nucleotide sequence