Experiment: D-Mannitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS17830 and EX31_RS17835 are separated by 253 nucleotides EX31_RS17835 and EX31_RS17840 are separated by 80 nucleotides
EX31_RS17830: EX31_RS17830 - maltoporin, at 121,290 to 122,546
_RS17830
EX31_RS17835: EX31_RS17835 - PTS transporter subunit EIIB, at 122,800 to 123,117
_RS17835
EX31_RS17840: EX31_RS17840 - beta-galactosidase, at 123,198 to 125,267
_RS17840
Position (kb)
122
123
124 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 121.841 kb on + strand, within EX31_RS17830 at 121.856 kb on + strand, within EX31_RS17830 at 121.860 kb on + strand, within EX31_RS17830 at 121.860 kb on + strand, within EX31_RS17830 at 121.860 kb on + strand, within EX31_RS17830 at 122.021 kb on + strand, within EX31_RS17830 at 122.022 kb on - strand, within EX31_RS17830 at 122.022 kb on - strand, within EX31_RS17830 at 122.022 kb on - strand, within EX31_RS17830 at 122.034 kb on + strand, within EX31_RS17830 at 122.111 kb on + strand, within EX31_RS17830 at 122.112 kb on - strand, within EX31_RS17830 at 122.112 kb on - strand, within EX31_RS17830 at 122.121 kb on + strand, within EX31_RS17830 at 122.122 kb on - strand, within EX31_RS17830 at 122.122 kb on - strand, within EX31_RS17830 at 122.122 kb on - strand, within EX31_RS17830 at 122.209 kb on - strand, within EX31_RS17830 at 122.280 kb on + strand, within EX31_RS17830 at 122.295 kb on + strand, within EX31_RS17830 at 122.296 kb on - strand, within EX31_RS17830 at 122.296 kb on - strand, within EX31_RS17830 at 122.296 kb on - strand, within EX31_RS17830 at 122.343 kb on + strand, within EX31_RS17830 at 122.344 kb on - strand, within EX31_RS17830 at 122.382 kb on + strand, within EX31_RS17830 at 122.382 kb on + strand, within EX31_RS17830 at 122.383 kb on - strand, within EX31_RS17830 at 122.384 kb on + strand, within EX31_RS17830 at 122.454 kb on + strand at 122.496 kb on - strand at 122.496 kb on - strand at 122.508 kb on - strand at 122.531 kb on - strand at 122.614 kb on + strand at 122.715 kb on + strand at 122.806 kb on - strand at 122.922 kb on + strand, within EX31_RS17835 at 122.944 kb on - strand, within EX31_RS17835 at 122.954 kb on - strand, within EX31_RS17835 at 122.976 kb on + strand, within EX31_RS17835 at 123.089 kb on - strand at 123.097 kb on - strand at 123.112 kb on + strand at 123.493 kb on + strand, within EX31_RS17840 at 123.493 kb on + strand, within EX31_RS17840 at 123.496 kb on + strand, within EX31_RS17840 at 123.563 kb on - strand, within EX31_RS17840 at 123.861 kb on - strand, within EX31_RS17840 at 123.861 kb on - strand, within EX31_RS17840 at 123.861 kb on - strand, within EX31_RS17840 at 123.862 kb on + strand, within EX31_RS17840 at 123.862 kb on + strand, within EX31_RS17840 at 123.862 kb on + strand, within EX31_RS17840 at 123.862 kb on + strand, within EX31_RS17840 at 123.863 kb on - strand, within EX31_RS17840 at 123.863 kb on - strand, within EX31_RS17840 at 123.863 kb on - strand, within EX31_RS17840 at 123.863 kb on - strand, within EX31_RS17840 at 123.863 kb on - strand, within EX31_RS17840 at 123.863 kb on - strand, within EX31_RS17840 at 123.863 kb on - strand, within EX31_RS17840 at 123.863 kb on - strand, within EX31_RS17840 at 123.863 kb on - strand, within EX31_RS17840 at 123.898 kb on - strand, within EX31_RS17840 at 123.898 kb on - strand, within EX31_RS17840 at 123.979 kb on + strand, within EX31_RS17840 at 123.979 kb on + strand, within EX31_RS17840 at 124.046 kb on + strand, within EX31_RS17840 at 124.046 kb on + strand, within EX31_RS17840 at 124.047 kb on - strand, within EX31_RS17840 at 124.047 kb on - strand, within EX31_RS17840 at 124.047 kb on - strand, within EX31_RS17840 at 124.066 kb on - strand, within EX31_RS17840 at 124.066 kb on - strand, within EX31_RS17840 at 124.066 kb on - strand, within EX31_RS17840
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannitol (C) remove 121,841 + EX31_RS17830 0.44 -1.8 121,856 + EX31_RS17830 0.45 -1.1 121,860 + EX31_RS17830 0.45 -1.1 121,860 + EX31_RS17830 0.45 +0.3 121,860 + EX31_RS17830 0.45 -0.2 122,021 + EX31_RS17830 0.58 +1.0 122,022 - EX31_RS17830 0.58 +1.7 122,022 - EX31_RS17830 0.58 -2.0 122,022 - EX31_RS17830 0.58 -1.2 122,034 + EX31_RS17830 0.59 -0.8 122,111 + EX31_RS17830 0.65 +1.1 122,112 - EX31_RS17830 0.65 +0.1 122,112 - EX31_RS17830 0.65 -1.2 122,121 + EX31_RS17830 0.66 -0.2 122,122 - EX31_RS17830 0.66 -0.9 122,122 - EX31_RS17830 0.66 +1.4 122,122 - EX31_RS17830 0.66 -1.2 122,209 - EX31_RS17830 0.73 -0.3 122,280 + EX31_RS17830 0.79 -0.2 122,295 + EX31_RS17830 0.80 -2.4 122,296 - EX31_RS17830 0.80 +2.1 122,296 - EX31_RS17830 0.80 -0.2 122,296 - EX31_RS17830 0.80 +0.8 122,343 + EX31_RS17830 0.84 -3.3 122,344 - EX31_RS17830 0.84 +2.8 122,382 + EX31_RS17830 0.87 +1.8 122,382 + EX31_RS17830 0.87 -1.2 122,383 - EX31_RS17830 0.87 +0.5 122,384 + EX31_RS17830 0.87 +0.8 122,454 + +0.4 122,496 - +0.8 122,496 - +0.8 122,508 - +0.8 122,531 - -0.8 122,614 + +2.6 122,715 + -0.0 122,806 - +1.4 122,922 + EX31_RS17835 0.38 -0.2 122,944 - EX31_RS17835 0.45 -2.2 122,954 - EX31_RS17835 0.48 -2.0 122,976 + EX31_RS17835 0.55 +2.1 123,089 - -1.8 123,097 - +2.4 123,112 + +0.3 123,493 + EX31_RS17840 0.14 +1.8 123,493 + EX31_RS17840 0.14 +3.1 123,496 + EX31_RS17840 0.14 +0.4 123,563 - EX31_RS17840 0.18 -1.8 123,861 - EX31_RS17840 0.32 +1.4 123,861 - EX31_RS17840 0.32 +0.8 123,861 - EX31_RS17840 0.32 +0.8 123,862 + EX31_RS17840 0.32 -0.2 123,862 + EX31_RS17840 0.32 -0.1 123,862 + EX31_RS17840 0.32 +0.1 123,862 + EX31_RS17840 0.32 -0.2 123,863 - EX31_RS17840 0.32 -0.8 123,863 - EX31_RS17840 0.32 +0.6 123,863 - EX31_RS17840 0.32 -2.4 123,863 - EX31_RS17840 0.32 +0.7 123,863 - EX31_RS17840 0.32 +0.8 123,863 - EX31_RS17840 0.32 -0.2 123,863 - EX31_RS17840 0.32 +0.3 123,863 - EX31_RS17840 0.32 +0.7 123,863 - EX31_RS17840 0.32 +0.8 123,898 - EX31_RS17840 0.34 -0.7 123,898 - EX31_RS17840 0.34 +0.8 123,979 + EX31_RS17840 0.38 +1.2 123,979 + EX31_RS17840 0.38 -0.3 124,046 + EX31_RS17840 0.41 -0.5 124,046 + EX31_RS17840 0.41 +1.1 124,047 - EX31_RS17840 0.41 -0.1 124,047 - EX31_RS17840 0.41 +1.3 124,047 - EX31_RS17840 0.41 -1.0 124,066 - EX31_RS17840 0.42 +0.1 124,066 - EX31_RS17840 0.42 -2.9 124,066 - EX31_RS17840 0.42 +0.8
Or see this region's nucleotide sequence