Experiment: D-Mannitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS07065 and EX31_RS07070 are separated by 25 nucleotides EX31_RS07070 and EX31_RS07075 are separated by 126 nucleotides
EX31_RS07065: EX31_RS07065 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 206,111 to 207,205
_RS07065
EX31_RS07070: EX31_RS07070 - aldo/keto reductase, at 207,231 to 208,286
_RS07070
EX31_RS07075: EX31_RS07075 - bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG, at 208,413 to 209,162
_RS07075
Position (kb) 207
208
209 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 206.350 kb on - strand, within EX31_RS07065 at 206.360 kb on + strand, within EX31_RS07065 at 206.380 kb on + strand, within EX31_RS07065 at 206.488 kb on - strand, within EX31_RS07065 at 206.488 kb on - strand, within EX31_RS07065 at 206.613 kb on + strand, within EX31_RS07065 at 206.613 kb on + strand, within EX31_RS07065 at 206.613 kb on + strand, within EX31_RS07065 at 206.614 kb on - strand, within EX31_RS07065 at 206.617 kb on + strand, within EX31_RS07065 at 206.673 kb on + strand, within EX31_RS07065 at 206.673 kb on + strand, within EX31_RS07065 at 206.673 kb on + strand, within EX31_RS07065 at 206.673 kb on + strand, within EX31_RS07065 at 206.673 kb on + strand, within EX31_RS07065 at 206.674 kb on - strand, within EX31_RS07065 at 206.675 kb on + strand, within EX31_RS07065 at 206.675 kb on + strand, within EX31_RS07065 at 206.675 kb on + strand, within EX31_RS07065 at 206.675 kb on + strand, within EX31_RS07065 at 206.675 kb on + strand, within EX31_RS07065 at 206.675 kb on + strand, within EX31_RS07065 at 206.675 kb on + strand, within EX31_RS07065 at 206.675 kb on + strand, within EX31_RS07065 at 206.675 kb on + strand, within EX31_RS07065 at 206.675 kb on + strand, within EX31_RS07065 at 206.675 kb on + strand, within EX31_RS07065 at 206.676 kb on - strand, within EX31_RS07065 at 206.676 kb on - strand, within EX31_RS07065 at 206.676 kb on - strand, within EX31_RS07065 at 206.676 kb on - strand, within EX31_RS07065 at 206.676 kb on - strand, within EX31_RS07065 at 206.716 kb on + strand, within EX31_RS07065 at 206.743 kb on + strand, within EX31_RS07065 at 206.743 kb on + strand, within EX31_RS07065 at 206.748 kb on + strand, within EX31_RS07065 at 206.748 kb on + strand, within EX31_RS07065 at 206.792 kb on - strand, within EX31_RS07065 at 206.854 kb on + strand, within EX31_RS07065 at 206.882 kb on - strand, within EX31_RS07065 at 206.977 kb on - strand, within EX31_RS07065 at 207.128 kb on + strand at 207.128 kb on + strand at 207.226 kb on - strand at 207.230 kb on + strand at 207.230 kb on + strand at 207.247 kb on + strand at 207.367 kb on + strand, within EX31_RS07070 at 207.367 kb on + strand, within EX31_RS07070 at 207.367 kb on + strand, within EX31_RS07070 at 207.368 kb on - strand, within EX31_RS07070 at 207.368 kb on - strand, within EX31_RS07070 at 207.542 kb on + strand, within EX31_RS07070 at 207.543 kb on - strand, within EX31_RS07070 at 207.600 kb on + strand, within EX31_RS07070 at 207.600 kb on + strand, within EX31_RS07070 at 207.601 kb on - strand, within EX31_RS07070 at 207.759 kb on - strand, within EX31_RS07070 at 207.759 kb on - strand, within EX31_RS07070 at 207.786 kb on + strand, within EX31_RS07070 at 207.787 kb on - strand, within EX31_RS07070 at 207.813 kb on + strand, within EX31_RS07070 at 208.172 kb on + strand, within EX31_RS07070 at 208.284 kb on + strand at 208.301 kb on + strand at 208.301 kb on + strand at 208.301 kb on + strand at 208.354 kb on + strand at 208.354 kb on + strand at 208.368 kb on - strand at 208.418 kb on + strand at 208.557 kb on + strand, within EX31_RS07075 at 208.557 kb on + strand, within EX31_RS07075 at 208.592 kb on + strand, within EX31_RS07075 at 208.632 kb on - strand, within EX31_RS07075 at 208.746 kb on + strand, within EX31_RS07075 at 208.746 kb on + strand, within EX31_RS07075 at 208.746 kb on + strand, within EX31_RS07075 at 208.746 kb on + strand, within EX31_RS07075 at 208.747 kb on - strand, within EX31_RS07075 at 208.747 kb on - strand, within EX31_RS07075 at 209.013 kb on + strand, within EX31_RS07075 at 209.018 kb on + strand, within EX31_RS07075 at 209.163 kb on + strand at 209.163 kb on + strand at 209.163 kb on + strand at 209.164 kb on - strand at 209.164 kb on - strand at 209.211 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannitol (C) remove 206,350 - EX31_RS07065 0.22 +1.5 206,360 + EX31_RS07065 0.23 +0.7 206,380 + EX31_RS07065 0.25 -0.7 206,488 - EX31_RS07065 0.34 -0.9 206,488 - EX31_RS07065 0.34 +0.7 206,613 + EX31_RS07065 0.46 -0.3 206,613 + EX31_RS07065 0.46 +0.9 206,613 + EX31_RS07065 0.46 +0.1 206,614 - EX31_RS07065 0.46 +0.7 206,617 + EX31_RS07065 0.46 +1.0 206,673 + EX31_RS07065 0.51 +2.3 206,673 + EX31_RS07065 0.51 -0.3 206,673 + EX31_RS07065 0.51 -0.3 206,673 + EX31_RS07065 0.51 -0.3 206,673 + EX31_RS07065 0.51 +0.7 206,674 - EX31_RS07065 0.51 -1.1 206,675 + EX31_RS07065 0.52 -0.7 206,675 + EX31_RS07065 0.52 -0.9 206,675 + EX31_RS07065 0.52 -0.3 206,675 + EX31_RS07065 0.52 +0.1 206,675 + EX31_RS07065 0.52 -0.3 206,675 + EX31_RS07065 0.52 -0.4 206,675 + EX31_RS07065 0.52 -2.1 206,675 + EX31_RS07065 0.52 +2.7 206,675 + EX31_RS07065 0.52 -0.9 206,675 + EX31_RS07065 0.52 +0.1 206,675 + EX31_RS07065 0.52 +1.7 206,676 - EX31_RS07065 0.52 -0.3 206,676 - EX31_RS07065 0.52 -1.4 206,676 - EX31_RS07065 0.52 +3.0 206,676 - EX31_RS07065 0.52 +0.2 206,676 - EX31_RS07065 0.52 -0.5 206,716 + EX31_RS07065 0.55 -2.4 206,743 + EX31_RS07065 0.58 -1.6 206,743 + EX31_RS07065 0.58 -2.7 206,748 + EX31_RS07065 0.58 +2.7 206,748 + EX31_RS07065 0.58 +4.0 206,792 - EX31_RS07065 0.62 +0.1 206,854 + EX31_RS07065 0.68 -1.6 206,882 - EX31_RS07065 0.70 -1.3 206,977 - EX31_RS07065 0.79 +0.7 207,128 + -0.3 207,128 + -0.5 207,226 - -1.1 207,230 + +1.0 207,230 + +1.3 207,247 + -0.1 207,367 + EX31_RS07070 0.13 -0.3 207,367 + EX31_RS07070 0.13 -0.4 207,367 + EX31_RS07070 0.13 -0.9 207,368 - EX31_RS07070 0.13 -1.3 207,368 - EX31_RS07070 0.13 -2.1 207,542 + EX31_RS07070 0.29 +0.7 207,543 - EX31_RS07070 0.30 +1.2 207,600 + EX31_RS07070 0.35 -1.1 207,600 + EX31_RS07070 0.35 -1.3 207,601 - EX31_RS07070 0.35 +0.4 207,759 - EX31_RS07070 0.50 -0.3 207,759 - EX31_RS07070 0.50 -1.1 207,786 + EX31_RS07070 0.53 -2.3 207,787 - EX31_RS07070 0.53 -0.6 207,813 + EX31_RS07070 0.55 +1.7 208,172 + EX31_RS07070 0.89 -0.3 208,284 + -0.9 208,301 + +1.1 208,301 + -0.3 208,301 + +0.7 208,354 + +0.1 208,354 + -0.3 208,368 - +0.2 208,418 + -0.6 208,557 + EX31_RS07075 0.19 +0.3 208,557 + EX31_RS07075 0.19 -0.0 208,592 + EX31_RS07075 0.24 +1.1 208,632 - EX31_RS07075 0.29 -1.6 208,746 + EX31_RS07075 0.44 +1.0 208,746 + EX31_RS07075 0.44 +0.3 208,746 + EX31_RS07075 0.44 -1.0 208,746 + EX31_RS07075 0.44 +1.6 208,747 - EX31_RS07075 0.45 -0.3 208,747 - EX31_RS07075 0.45 -0.3 209,013 + EX31_RS07075 0.80 -0.3 209,018 + EX31_RS07075 0.81 +0.0 209,163 + -0.7 209,163 + -0.3 209,163 + +0.6 209,164 - +1.7 209,164 - -2.3 209,211 - +0.3
Or see this region's nucleotide sequence