Experiment: D-Mannitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS06870 and EX31_RS06875 are separated by 254 nucleotides EX31_RS06875 and EX31_RS06880 are separated by 197 nucleotides EX31_RS06880 and EX31_RS06885 are separated by 222 nucleotides
EX31_RS06870: EX31_RS06870 - PTS maltose transporter subunit IICB, at 162,472 to 164,085
_RS06870
EX31_RS06875: EX31_RS06875 - Mal regulon transcriptional regulator MalI, at 164,340 to 165,371
_RS06875
EX31_RS06880: EX31_RS06880 - colicin M resistance protein, at 165,569 to 165,940
_RS06880
EX31_RS06885: EX31_RS06885 - NAD(P)-dependent oxidoreductase, at 166,163 to 167,044
_RS06885
Position (kb) 164
165
166 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 163.381 kb on + strand, within EX31_RS06870 at 163.630 kb on + strand, within EX31_RS06870 at 163.631 kb on - strand, within EX31_RS06870 at 163.686 kb on + strand, within EX31_RS06870 at 163.687 kb on - strand, within EX31_RS06870 at 164.106 kb on + strand at 164.240 kb on + strand at 164.241 kb on - strand at 164.264 kb on - strand at 164.283 kb on + strand at 164.507 kb on + strand, within EX31_RS06875 at 164.545 kb on + strand, within EX31_RS06875 at 164.555 kb on + strand, within EX31_RS06875 at 164.557 kb on + strand, within EX31_RS06875 at 164.571 kb on + strand, within EX31_RS06875 at 164.626 kb on + strand, within EX31_RS06875 at 164.626 kb on + strand, within EX31_RS06875 at 164.678 kb on + strand, within EX31_RS06875 at 164.729 kb on + strand, within EX31_RS06875 at 164.834 kb on + strand, within EX31_RS06875 at 164.834 kb on + strand, within EX31_RS06875 at 164.834 kb on + strand, within EX31_RS06875 at 164.834 kb on + strand, within EX31_RS06875 at 164.862 kb on + strand, within EX31_RS06875 at 165.046 kb on + strand, within EX31_RS06875 at 165.086 kb on + strand, within EX31_RS06875 at 165.111 kb on + strand, within EX31_RS06875 at 165.111 kb on + strand, within EX31_RS06875 at 165.190 kb on + strand, within EX31_RS06875 at 165.190 kb on + strand, within EX31_RS06875 at 165.195 kb on - strand, within EX31_RS06875 at 165.370 kb on - strand at 165.404 kb on + strand at 165.571 kb on - strand at 165.668 kb on - strand, within EX31_RS06880 at 165.668 kb on - strand, within EX31_RS06880 at 165.668 kb on - strand, within EX31_RS06880 at 165.669 kb on + strand, within EX31_RS06880 at 165.669 kb on + strand, within EX31_RS06880 at 165.669 kb on + strand, within EX31_RS06880 at 165.670 kb on - strand, within EX31_RS06880 at 165.670 kb on - strand, within EX31_RS06880 at 165.670 kb on - strand, within EX31_RS06880 at 165.670 kb on - strand, within EX31_RS06880 at 165.670 kb on - strand, within EX31_RS06880 at 165.670 kb on - strand, within EX31_RS06880 at 165.670 kb on - strand, within EX31_RS06880 at 165.670 kb on - strand, within EX31_RS06880 at 165.670 kb on - strand, within EX31_RS06880 at 165.758 kb on - strand, within EX31_RS06880 at 165.777 kb on + strand, within EX31_RS06880 at 165.777 kb on + strand, within EX31_RS06880 at 165.778 kb on - strand, within EX31_RS06880 at 165.778 kb on - strand, within EX31_RS06880 at 165.778 kb on - strand, within EX31_RS06880 at 165.778 kb on - strand, within EX31_RS06880 at 165.861 kb on + strand, within EX31_RS06880 at 165.862 kb on - strand, within EX31_RS06880 at 165.862 kb on - strand, within EX31_RS06880 at 165.865 kb on + strand, within EX31_RS06880 at 165.865 kb on + strand, within EX31_RS06880 at 165.866 kb on - strand, within EX31_RS06880 at 165.866 kb on - strand, within EX31_RS06880 at 165.866 kb on - strand, within EX31_RS06880 at 165.867 kb on + strand, within EX31_RS06880 at 165.867 kb on + strand, within EX31_RS06880 at 165.867 kb on + strand, within EX31_RS06880 at 165.867 kb on + strand, within EX31_RS06880 at 165.867 kb on + strand, within EX31_RS06880 at 165.867 kb on + strand, within EX31_RS06880 at 165.868 kb on - strand, within EX31_RS06880 at 165.868 kb on - strand, within EX31_RS06880 at 165.868 kb on - strand, within EX31_RS06880 at 165.868 kb on - strand, within EX31_RS06880 at 165.868 kb on - strand, within EX31_RS06880 at 165.868 kb on - strand, within EX31_RS06880 at 165.868 kb on - strand, within EX31_RS06880 at 165.868 kb on - strand, within EX31_RS06880 at 165.935 kb on - strand at 165.941 kb on - strand at 165.941 kb on - strand at 165.941 kb on - strand at 165.963 kb on + strand at 165.963 kb on + strand at 165.991 kb on - strand at 166.001 kb on + strand at 166.024 kb on + strand at 166.025 kb on - strand at 166.025 kb on - strand at 166.030 kb on - strand at 166.038 kb on + strand at 166.038 kb on + strand at 166.052 kb on + strand at 166.053 kb on - strand at 166.053 kb on - strand at 166.056 kb on + strand at 166.056 kb on + strand at 166.056 kb on + strand at 166.059 kb on + strand at 166.137 kb on + strand at 166.137 kb on + strand at 166.137 kb on + strand at 166.137 kb on + strand at 166.137 kb on + strand at 166.137 kb on + strand at 166.137 kb on + strand at 166.137 kb on + strand at 166.137 kb on + strand at 166.137 kb on + strand at 166.137 kb on + strand at 166.137 kb on + strand at 166.137 kb on + strand at 166.137 kb on + strand at 166.137 kb on + strand at 166.137 kb on + strand at 166.138 kb on - strand at 166.138 kb on - strand at 166.138 kb on - strand at 166.138 kb on - strand at 166.138 kb on - strand at 166.138 kb on - strand at 166.138 kb on - strand at 166.150 kb on + strand at 166.192 kb on - strand at 166.360 kb on + strand, within EX31_RS06885 at 166.360 kb on + strand, within EX31_RS06885 at 166.360 kb on + strand, within EX31_RS06885
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannitol (C) remove 163,381 + EX31_RS06870 0.56 +1.7 163,630 + EX31_RS06870 0.72 +0.1 163,631 - EX31_RS06870 0.72 -1.1 163,686 + EX31_RS06870 0.75 +1.7 163,687 - EX31_RS06870 0.75 +1.1 164,106 + -0.9 164,240 + +0.4 164,241 - +0.4 164,264 - -0.9 164,283 + +1.1 164,507 + EX31_RS06875 0.16 +0.2 164,545 + EX31_RS06875 0.20 -0.1 164,555 + EX31_RS06875 0.21 +0.5 164,557 + EX31_RS06875 0.21 +1.2 164,571 + EX31_RS06875 0.22 -0.0 164,626 + EX31_RS06875 0.28 +1.0 164,626 + EX31_RS06875 0.28 +0.7 164,678 + EX31_RS06875 0.33 -0.3 164,729 + EX31_RS06875 0.38 +0.9 164,834 + EX31_RS06875 0.48 +0.6 164,834 + EX31_RS06875 0.48 +0.7 164,834 + EX31_RS06875 0.48 +0.0 164,834 + EX31_RS06875 0.48 -1.6 164,862 + EX31_RS06875 0.51 +1.3 165,046 + EX31_RS06875 0.68 -2.4 165,086 + EX31_RS06875 0.72 +0.6 165,111 + EX31_RS06875 0.75 +1.5 165,111 + EX31_RS06875 0.75 -0.1 165,190 + EX31_RS06875 0.82 +0.4 165,190 + EX31_RS06875 0.82 +0.9 165,195 - EX31_RS06875 0.83 +0.4 165,370 - +0.3 165,404 + +0.7 165,571 - +3.0 165,668 - EX31_RS06880 0.27 +0.7 165,668 - EX31_RS06880 0.27 +1.4 165,668 - EX31_RS06880 0.27 +1.7 165,669 + EX31_RS06880 0.27 -1.3 165,669 + EX31_RS06880 0.27 -1.6 165,669 + EX31_RS06880 0.27 -1.1 165,670 - EX31_RS06880 0.27 +0.5 165,670 - EX31_RS06880 0.27 +1.7 165,670 - EX31_RS06880 0.27 +1.1 165,670 - EX31_RS06880 0.27 -2.4 165,670 - EX31_RS06880 0.27 +0.7 165,670 - EX31_RS06880 0.27 -0.3 165,670 - EX31_RS06880 0.27 +0.7 165,670 - EX31_RS06880 0.27 +0.2 165,670 - EX31_RS06880 0.27 -0.6 165,758 - EX31_RS06880 0.51 -0.3 165,777 + EX31_RS06880 0.56 -1.6 165,777 + EX31_RS06880 0.56 -0.9 165,778 - EX31_RS06880 0.56 -0.1 165,778 - EX31_RS06880 0.56 +1.7 165,778 - EX31_RS06880 0.56 +1.7 165,778 - EX31_RS06880 0.56 +0.0 165,861 + EX31_RS06880 0.78 +0.7 165,862 - EX31_RS06880 0.79 -0.3 165,862 - EX31_RS06880 0.79 -0.9 165,865 + EX31_RS06880 0.80 -0.5 165,865 + EX31_RS06880 0.80 +0.4 165,866 - EX31_RS06880 0.80 +3.5 165,866 - EX31_RS06880 0.80 +1.7 165,866 - EX31_RS06880 0.80 +1.7 165,867 + EX31_RS06880 0.80 +0.7 165,867 + EX31_RS06880 0.80 +1.5 165,867 + EX31_RS06880 0.80 -0.3 165,867 + EX31_RS06880 0.80 -0.9 165,867 + EX31_RS06880 0.80 -1.6 165,867 + EX31_RS06880 0.80 -1.3 165,868 - EX31_RS06880 0.80 +0.7 165,868 - EX31_RS06880 0.80 -0.3 165,868 - EX31_RS06880 0.80 -0.1 165,868 - EX31_RS06880 0.80 -0.3 165,868 - EX31_RS06880 0.80 +0.7 165,868 - EX31_RS06880 0.80 +0.1 165,868 - EX31_RS06880 0.80 +1.0 165,868 - EX31_RS06880 0.80 -0.0 165,935 - -0.6 165,941 - -0.5 165,941 - +0.9 165,941 - -0.3 165,963 + +2.1 165,963 + +0.5 165,991 - +1.9 166,001 + -0.9 166,024 + +0.3 166,025 - +1.5 166,025 - +0.9 166,030 - +1.2 166,038 + +0.2 166,038 + -0.4 166,052 + -0.9 166,053 - +0.7 166,053 - +2.6 166,056 + -0.3 166,056 + +0.7 166,056 + -1.4 166,059 + -1.3 166,137 + +0.1 166,137 + +1.1 166,137 + +0.4 166,137 + +0.7 166,137 + -0.3 166,137 + +0.7 166,137 + +0.7 166,137 + -0.7 166,137 + +3.3 166,137 + +2.0 166,137 + +1.3 166,137 + -0.9 166,137 + -1.1 166,137 + +0.2 166,137 + -0.7 166,137 + -1.3 166,138 - +0.4 166,138 - +0.7 166,138 - +1.7 166,138 - -0.3 166,138 - +1.7 166,138 - +0.9 166,138 - -0.6 166,150 + -0.9 166,192 - -1.6 166,360 + EX31_RS06885 0.22 +0.7 166,360 + EX31_RS06885 0.22 +1.5 166,360 + EX31_RS06885 0.22 -0.9
Or see this region's nucleotide sequence