Experiment: D-Mannitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS06275 and EX31_RS06280 are separated by 166 nucleotides EX31_RS06280 and EX31_RS06285 are separated by 340 nucleotides EX31_RS06285 and EX31_RS06290 are separated by 95 nucleotides
EX31_RS06275: EX31_RS06275 - D-hexose-6-phosphate mutarotase, at 17,714 to 18,583
_RS06275
EX31_RS06280: EX31_RS06280 - glyceraldehyde-3-phosphate dehydrogenase, at 18,750 to 19,757
_RS06280
EX31_RS06285: EX31_RS06285 - peptide-methionine (R)-S-oxide reductase MsrB, at 20,098 to 20,511
_RS06285
EX31_RS06290: EX31_RS06290 - DUF1315 family protein, at 20,607 to 20,879
_RS06290
Position (kb) 18
19
20 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 17.765 kb on - strand at 17.776 kb on + strand at 17.815 kb on + strand, within EX31_RS06275 at 17.914 kb on + strand, within EX31_RS06275 at 17.914 kb on + strand, within EX31_RS06275 at 17.914 kb on + strand, within EX31_RS06275 at 17.915 kb on - strand, within EX31_RS06275 at 17.915 kb on - strand, within EX31_RS06275 at 17.965 kb on - strand, within EX31_RS06275 at 18.064 kb on + strand, within EX31_RS06275 at 18.065 kb on - strand, within EX31_RS06275 at 18.096 kb on + strand, within EX31_RS06275 at 18.097 kb on - strand, within EX31_RS06275 at 18.295 kb on + strand, within EX31_RS06275 at 18.296 kb on - strand, within EX31_RS06275 at 18.584 kb on + strand at 18.614 kb on - strand at 18.632 kb on + strand at 18.632 kb on + strand at 18.632 kb on + strand at 18.632 kb on + strand at 18.633 kb on - strand at 18.744 kb on - strand at 19.837 kb on + strand at 19.837 kb on + strand at 19.837 kb on + strand at 19.838 kb on - strand at 19.838 kb on - strand at 19.838 kb on - strand at 19.846 kb on - strand at 19.864 kb on - strand at 19.933 kb on + strand at 19.933 kb on + strand at 19.934 kb on - strand at 19.934 kb on - strand at 19.934 kb on - strand at 19.934 kb on - strand at 19.934 kb on - strand at 19.935 kb on + strand at 19.935 kb on + strand at 19.935 kb on + strand at 19.935 kb on + strand at 19.935 kb on + strand at 19.936 kb on - strand at 19.936 kb on - strand at 19.936 kb on - strand at 20.002 kb on - strand at 20.008 kb on + strand at 20.008 kb on + strand at 20.049 kb on - strand at 20.058 kb on + strand at 20.058 kb on + strand at 20.227 kb on + strand, within EX31_RS06285 at 20.227 kb on + strand, within EX31_RS06285 at 20.227 kb on + strand, within EX31_RS06285 at 20.228 kb on - strand, within EX31_RS06285 at 20.260 kb on + strand, within EX31_RS06285 at 20.335 kb on + strand, within EX31_RS06285 at 20.446 kb on + strand, within EX31_RS06285 at 20.453 kb on + strand, within EX31_RS06285 at 20.476 kb on - strand at 20.532 kb on + strand at 20.532 kb on + strand at 20.583 kb on + strand at 20.615 kb on + strand at 20.615 kb on + strand at 20.615 kb on + strand at 20.624 kb on + strand at 20.624 kb on + strand at 20.624 kb on + strand at 20.624 kb on + strand at 20.624 kb on + strand at 20.624 kb on + strand at 20.624 kb on + strand at 20.624 kb on + strand at 20.632 kb on + strand at 20.632 kb on + strand at 20.632 kb on + strand at 20.632 kb on + strand at 20.632 kb on + strand at 20.632 kb on + strand at 20.749 kb on - strand, within EX31_RS06290
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannitol (C) remove 17,765 - -0.7 17,776 + +3.0 17,815 + EX31_RS06275 0.12 -0.9 17,914 + EX31_RS06275 0.23 +1.5 17,914 + EX31_RS06275 0.23 -0.3 17,914 + EX31_RS06275 0.23 +0.7 17,915 - EX31_RS06275 0.23 +0.5 17,915 - EX31_RS06275 0.23 +1.1 17,965 - EX31_RS06275 0.29 +0.5 18,064 + EX31_RS06275 0.40 +1.9 18,065 - EX31_RS06275 0.40 -0.3 18,096 + EX31_RS06275 0.44 -0.3 18,097 - EX31_RS06275 0.44 -0.6 18,295 + EX31_RS06275 0.67 +1.9 18,296 - EX31_RS06275 0.67 +1.7 18,584 + -0.6 18,614 - -0.9 18,632 + -0.3 18,632 + -2.3 18,632 + -1.3 18,632 + +0.4 18,633 - -0.2 18,744 - -0.3 19,837 + +1.7 19,837 + +2.7 19,837 + -0.6 19,838 - +0.0 19,838 - -0.9 19,838 - -0.0 19,846 - +1.1 19,864 - +1.1 19,933 + +1.0 19,933 + -1.4 19,934 - -0.3 19,934 - -0.0 19,934 - -0.3 19,934 - +2.3 19,934 - +0.1 19,935 + +0.8 19,935 + -1.3 19,935 + +0.7 19,935 + +0.5 19,935 + +0.5 19,936 - -0.3 19,936 - -0.9 19,936 - +0.0 20,002 - +0.1 20,008 + -0.3 20,008 + +0.1 20,049 - -0.9 20,058 + +1.3 20,058 + -0.9 20,227 + EX31_RS06285 0.31 +0.6 20,227 + EX31_RS06285 0.31 +0.2 20,227 + EX31_RS06285 0.31 +1.7 20,228 - EX31_RS06285 0.31 +1.3 20,260 + EX31_RS06285 0.39 -0.3 20,335 + EX31_RS06285 0.57 -1.3 20,446 + EX31_RS06285 0.84 -2.3 20,453 + EX31_RS06285 0.86 +1.0 20,476 - +3.0 20,532 + +1.1 20,532 + +0.0 20,583 + -0.7 20,615 + -0.3 20,615 + -0.3 20,615 + +1.1 20,624 + -0.8 20,624 + +1.1 20,624 + -1.4 20,624 + +0.1 20,624 + -1.1 20,624 + +3.0 20,624 + -0.0 20,624 + -0.6 20,632 + +0.0 20,632 + -2.6 20,632 + -0.3 20,632 + -0.5 20,632 + -0.1 20,632 + +4.0 20,749 - EX31_RS06290 0.52 +3.0
Or see this region's nucleotide sequence