Strain Fitness in Rahnella sp. WP5 around EX31_RS04935

Experiment: D-Mannitol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannitol (C)
112,220	+		EX31_RS04930	0.53	+0.6
112,220	+		EX31_RS04930	0.53	-2.1
112,220	+		EX31_RS04930	0.53	+0.5
112,221	-		EX31_RS04930	0.53	+0.8
112,255	+		EX31_RS04930	0.55	-0.2
112,278	+		EX31_RS04930	0.56	-0.5
112,278	+		EX31_RS04930	0.56	+0.4
112,278	+		EX31_RS04930	0.56	+0.8
112,279	-		EX31_RS04930	0.56	-0.3
112,279	-		EX31_RS04930	0.56	-0.6
112,279	-		EX31_RS04930	0.56	+0.0
112,279	-		EX31_RS04930	0.56	+0.8
112,279	-		EX31_RS04930	0.56	-1.0
112,279	-		EX31_RS04930	0.56	-1.1
112,279	-		EX31_RS04930	0.56	+1.0
112,353	+		EX31_RS04930	0.60	+0.0
112,553	+		EX31_RS04930	0.69	-0.3
112,553	+		EX31_RS04930	0.69	+0.0
112,553	+		EX31_RS04930	0.69	+0.9
112,553	+		EX31_RS04930	0.69	+0.2
112,553	+		EX31_RS04930	0.69	+1.7
112,553	+		EX31_RS04930	0.69	-0.2
112,553	+		EX31_RS04930	0.69	-1.0
112,553	+		EX31_RS04930	0.69	+0.5
112,553	+		EX31_RS04930	0.69	-0.7
112,553	+		EX31_RS04930	0.69	-0.5
112,554	-		EX31_RS04930	0.69	+0.4
112,554	-		EX31_RS04930	0.69	-0.5
112,554	-		EX31_RS04930	0.69	+1.3
112,590	-		EX31_RS04930	0.71	+0.6
112,590	-		EX31_RS04930	0.71	-0.3
112,620	-		EX31_RS04930	0.72	+0.1
112,620	-		EX31_RS04930	0.72	+0.7
112,631	-		EX31_RS04930	0.73	-0.9
112,720	-		EX31_RS04930	0.77	-0.8
112,737	+		EX31_RS04930	0.78	+0.7
112,737	+		EX31_RS04930	0.78	+2.8
112,738	-		EX31_RS04930	0.78	+1.3
112,739	+		EX31_RS04930	0.78	-2.6
112,739	+		EX31_RS04930	0.78	-0.4
112,740	-		EX31_RS04930	0.78	+0.5
112,740	-		EX31_RS04930	0.78	-0.1
112,796	+		EX31_RS04930	0.81	+1.4
112,796	+		EX31_RS04930	0.81	+0.0
112,797	-		EX31_RS04930	0.81	+0.0
112,840	-		EX31_RS04930	0.83	-0.8
113,010	+				+1.7
113,010	+				+0.3
113,011	-				-0.9
113,127	+				-0.4
113,127	+				-1.0
113,127	+				-0.9
113,128	-				+0.1
113,128	-				-0.6
113,128	-				+0.3
113,128	-				+0.1
113,143	+				-2.1
113,143	+				+1.6
113,144	-				+2.1
113,144	-				-2.2
113,144	-				-0.2
113,201	-				+0.0
113,201	-				+0.2
113,201	-				+0.1
113,231	-				+0.0
113,265	+				-0.4
113,266	-				+0.2
113,266	-				+0.5
113,288	+				-0.4
113,350	+				+1.0
113,350	+				+0.2
113,350	+				-0.5
113,351	-				+2.9
113,351	-				+1.5
113,351	-				+0.1
113,377	+				-0.4
113,378	-				+0.6
113,444	-		EX31_RS04935	0.10	+0.4
113,515	+		EX31_RS04935	0.13	-0.2
113,516	-		EX31_RS04935	0.13	+0.1
113,564	+		EX31_RS04935	0.15	-0.7
113,564	+		EX31_RS04935	0.15	+0.6
113,564	+		EX31_RS04935	0.15	-0.2
113,564	+		EX31_RS04935	0.15	+0.4
113,565	-		EX31_RS04935	0.15	+0.1
113,565	-		EX31_RS04935	0.15	-0.5
113,658	-		EX31_RS04935	0.19	-0.3
113,749	+		EX31_RS04935	0.23	+0.4
113,749	+		EX31_RS04935	0.23	+0.7
113,830	+		EX31_RS04935	0.26	+0.5
113,831	-		EX31_RS04935	0.26	+0.6
113,831	-		EX31_RS04935	0.26	+1.0
113,831	-		EX31_RS04935	0.26	-0.2
113,834	+		EX31_RS04935	0.26	+0.7
113,835	-		EX31_RS04935	0.26	-1.1
113,851	+		EX31_RS04935	0.27	+0.3
113,851	+		EX31_RS04935	0.27	+0.6
113,851	+		EX31_RS04935	0.27	-1.5
113,851	+		EX31_RS04935	0.27	-0.2
113,851	+		EX31_RS04935	0.27	-0.8
113,852	-		EX31_RS04935	0.27	-1.5
113,854	+		EX31_RS04935	0.27	+0.6
113,945	+		EX31_RS04935	0.31	+1.2
113,945	+		EX31_RS04935	0.31	-1.2
113,945	+		EX31_RS04935	0.31	+0.3
113,945	+		EX31_RS04935	0.31	+1.1
113,945	+		EX31_RS04935	0.31	-0.3
113,946	-		EX31_RS04935	0.31	-0.0
113,974	+		EX31_RS04935	0.32	+1.4
113,974	+		EX31_RS04935	0.32	-0.7
113,974	+		EX31_RS04935	0.32	+0.5
113,975	-		EX31_RS04935	0.32	-0.2
113,975	-		EX31_RS04935	0.32	-0.9
113,975	-		EX31_RS04935	0.32	+2.3
113,975	-		EX31_RS04935	0.32	+0.3
113,975	-		EX31_RS04935	0.32	-1.1
113,975	-		EX31_RS04935	0.32	-0.2
113,990	+		EX31_RS04935	0.33	+0.6
113,991	-		EX31_RS04935	0.33	+0.7
113,997	+		EX31_RS04935	0.33	+0.1
113,997	+		EX31_RS04935	0.33	+0.6
113,997	+		EX31_RS04935	0.33	-0.1
113,997	+		EX31_RS04935	0.33	-0.4
113,997	+		EX31_RS04935	0.33	-1.8
113,997	+		EX31_RS04935	0.33	-1.0
113,997	+		EX31_RS04935	0.33	+1.3
113,997	+		EX31_RS04935	0.33	+1.3
113,997	+		EX31_RS04935	0.33	+0.7
113,998	-		EX31_RS04935	0.33	+0.9
113,998	-		EX31_RS04935	0.33	-0.1
113,998	-		EX31_RS04935	0.33	-0.2
113,998	-		EX31_RS04935	0.33	-0.2
114,021	-		EX31_RS04935	0.34	+0.6
114,021	-		EX31_RS04935	0.34	-0.8
114,049	+		EX31_RS04935	0.35	+0.1
114,049	+		EX31_RS04935	0.35	-0.1
114,049	+		EX31_RS04935	0.35	+0.3
114,050	-		EX31_RS04935	0.35	+0.4
114,050	-		EX31_RS04935	0.35	+0.6
114,050	-		EX31_RS04935	0.35	+0.8
114,152	+		EX31_RS04935	0.39	+1.9
114,152	+		EX31_RS04935	0.39	-1.2
114,153	-		EX31_RS04935	0.40	+0.8
114,153	-		EX31_RS04935	0.40	-0.2
114,210	-		EX31_RS04935	0.42	-0.0
114,210	-		EX31_RS04935	0.42	+0.1
114,210	-		EX31_RS04935	0.42	-1.0
114,210	-		EX31_RS04935	0.42	+0.2
114,210	-		EX31_RS04935	0.42	-1.1
114,219	-		EX31_RS04935	0.42	+0.2
114,273	+		EX31_RS04935	0.44	-0.9
114,273	+		EX31_RS04935	0.44	+0.4
114,273	+		EX31_RS04935	0.44	-0.1
114,274	-		EX31_RS04935	0.45	+0.4
114,283	+		EX31_RS04935	0.45	-0.1
114,283	+		EX31_RS04935	0.45	+0.0
114,283	+		EX31_RS04935	0.45	+0.9
114,284	-		EX31_RS04935	0.45	-0.1
114,284	-		EX31_RS04935	0.45	-0.4
114,284	-		EX31_RS04935	0.45	-2.4
114,284	-		EX31_RS04935	0.45	+1.1
114,374	+		EX31_RS04935	0.49	+1.3
114,455	+		EX31_RS04935	0.52	-0.1
114,456	-		EX31_RS04935	0.52	+0.2
114,477	-		EX31_RS04935	0.53	+0.1
114,477	-		EX31_RS04935	0.53	+1.9
114,477	-		EX31_RS04935	0.53	-0.5
114,565	+		EX31_RS04935	0.57	-1.1
114,565	+		EX31_RS04935	0.57	+1.8
114,566	-		EX31_RS04935	0.57	+0.0
114,650	+		EX31_RS04935	0.60	-1.6
114,651	-		EX31_RS04935	0.60	-1.8
114,691	+		EX31_RS04935	0.62	+0.1
114,691	+		EX31_RS04935	0.62	+2.0
114,691	+		EX31_RS04935	0.62	-0.7
114,691	+		EX31_RS04935	0.62	-0.4
114,691	+		EX31_RS04935	0.62	-0.1
114,692	-		EX31_RS04935	0.62	+0.9
114,772	+		EX31_RS04935	0.65	-1.2
114,825	+		EX31_RS04935	0.67	+0.0
114,825	+		EX31_RS04935	0.67	+0.9
114,825	+		EX31_RS04935	0.67	-0.8
114,826	-		EX31_RS04935	0.67	-1.2
114,826	-		EX31_RS04935	0.67	-0.1
114,890	+		EX31_RS04935	0.70	-0.1
114,953	+		EX31_RS04935	0.73	+0.3
115,053	-		EX31_RS04935	0.77	+3.3
115,106	-		EX31_RS04935	0.79	+0.4
115,170	+		EX31_RS04935	0.82	-0.8
115,177	+		EX31_RS04935	0.82	-0.5
115,237	+		EX31_RS04935	0.84	-0.7
115,237	+		EX31_RS04935	0.84	+0.1
115,237	+		EX31_RS04935	0.84	+0.3
115,238	-		EX31_RS04935	0.84	+1.0
115,238	-		EX31_RS04935	0.84	+1.1
115,238	-		EX31_RS04935	0.84	+1.1
115,364	+		EX31_RS04935	0.90	-0.0
115,412	+				-1.2
115,412	+				-0.1
115,412	+				-0.2
115,413	-				-0.1
115,413	-				-0.0
115,414	+				-0.2
115,414	+				-1.0
115,414	+				-0.6
115,414	+				-0.2
115,414	+				-0.5
115,414	+				-0.5
115,414	+				+0.8
115,414	+				-0.2
115,414	+				-0.6
115,415	-				-1.8
115,415	-				+0.2
115,415	-				+0.3
115,415	-				-0.5
115,415	-				+0.2
115,415	-				-0.6
115,418	+				-0.7
115,418	+				+0.2
115,419	-				+1.3
115,419	-				-0.8
115,419	-				+0.5
115,526	+				+0.1
115,526	+				-0.2
115,526	+				-0.5
115,526	+				-0.1
115,527	-				+0.1
115,527	-				-0.8
115,613	+				-0.2
115,613	+				+0.8
115,613	+				-1.2
115,613	+				+0.4
115,614	-				+0.3
115,614	-				-0.2
115,677	-				+0.5
115,680	+				+0.2
115,680	+				+1.2
115,680	+				-0.2
115,680	+				+1.1
115,680	+				+0.8
115,680	+				-0.2
115,680	+				-0.6
115,680	+				+1.1
115,680	+				+0.5
115,680	+				+0.5
115,680	+				-0.4
115,680	+				-0.4
115,680	+				-0.2
115,680	+				-0.8
115,680	+				-0.4
115,680	+				-0.3
115,680	+				+0.3
115,680	+				-0.8
115,680	+				-0.1
115,680	+				+0.1
115,680	+				-0.9
115,680	+				+0.2
115,680	+				+0.1
115,680	+				+0.4
115,680	+				-0.1
115,680	+				+0.3
115,680	+				+1.9
115,680	+				-0.8
115,680	+				-0.9
115,680	+				-1.0
115,680	+				-1.8
115,680	+				-1.1
115,680	+				+0.8
115,680	+				+0.1
115,680	+				+0.5
115,680	+				+0.2
115,680	+				+0.8
115,680	+				-1.5
115,680	+				+0.6
115,680	+				+0.3
115,680	+				-0.7
115,680	+				+0.5
115,680	+				-1.6
115,680	+				-0.8
115,680	+				+0.6
115,680	+				-0.0
115,680	+				+0.8
115,680	+				+0.6
115,680	+				+0.1
115,680	+				-1.2
115,680	+				+0.2
115,680	+				+0.1
115,680	+				+0.0
115,680	+				+0.8
115,680	+				+0.4
115,680	+				+0.1
115,680	+				+0.2
115,680	+				-1.1
115,680	+				-1.2
115,680	+				-0.6
115,680	+				-0.1
115,680	+				+1.3
115,681	-				-1.5
115,681	-				+1.0
115,681	-				+1.3
115,681	-				+0.2
115,681	-				+1.0
115,681	-				+2.2
115,681	-				-0.7
115,681	-				+0.3
115,681	-				-0.1
115,681	-				+0.8
115,681	-				-0.5
115,681	-				+0.7
115,681	-				-0.2
115,681	-				+1.3
115,681	-				-0.2
115,681	-				+0.9
115,681	-				+0.1
115,681	-				+0.1
115,681	-				+1.8
115,681	-				+0.3
115,681	-				-0.7
115,681	-				+0.6
115,681	-				-0.0
115,681	-				+0.1
115,681	-				-1.0
115,681	-				+0.3
115,681	-				+0.9
115,681	-				+0.3
115,681	-				+0.9
115,681	-				+1.0
115,681	-				+1.3
115,681	-				+0.1
115,681	-				-0.4
115,681	-				+0.2
115,681	-				+0.9
115,681	-				+0.9
115,681	-				+0.4
115,681	-				+0.3
115,681	-				-0.2
115,681	-				-0.8
115,681	-				-1.5
115,681	-				-0.5
115,681	-				+0.3
115,681	-				-0.7
115,684	+				+0.0
115,684	+				-0.3
115,684	+				+0.5
115,684	+				-0.9
115,684	+				+0.0
115,684	+				-0.5
115,684	+				-0.9
115,684	+				+0.1
115,684	+				-0.7
115,684	+				+0.2
115,684	+				-1.0
115,684	+				-2.2
115,684	+				+0.2
115,684	+				+0.3
115,684	+				-2.9
115,684	+				-0.1
115,684	+				+1.3
115,684	+				-0.4
115,684	+				+0.0
115,685	-				+0.2
115,685	-				+1.1
115,685	-				-0.1
115,685	-				-0.6
115,685	-				-0.5
115,685	-				+0.4
115,685	-				+0.3
115,685	-				+1.3
115,685	-				+2.2
115,685	-				+0.4
115,685	-				-1.5
115,685	-				-0.9
115,685	-				+0.1
115,685	-				+0.7
115,685	-				+1.2
115,685	-				+0.4
115,685	-				-0.5
115,685	-				-0.1
115,685	-				+0.9
115,685	-				-0.2
115,685	-				+0.2
115,686	+				+0.5
115,687	-				-2.6
115,687	-				+0.1
115,693	+				-1.5
115,693	+				-0.9
115,693	+				+0.1
115,693	+				-0.1
115,693	+				+0.2
115,694	-				+0.2
115,694	-				+0.2
115,769	-				+0.2
115,769	-				-0.7
115,769	-				+1.6
115,861	+				+0.1
115,882	+				-0.1
115,883	-				+0.4
115,883	-				-0.7
115,895	-				+0.2
115,897	+				+1.4
115,942	+				+1.7
115,943	-				+0.1
116,029	-		EX31_RS04940	0.21	+1.5
116,093	+		EX31_RS04940	0.31	+0.2
116,093	+		EX31_RS04940	0.31	-1.7
116,093	+		EX31_RS04940	0.31	+0.4
116,093	+		EX31_RS04940	0.31	+1.0
116,093	+		EX31_RS04940	0.31	+1.1
116,093	+		EX31_RS04940	0.31	+0.5
116,093	+		EX31_RS04940	0.31	-1.8
116,094	-		EX31_RS04940	0.31	-0.4
116,094	-		EX31_RS04940	0.31	-0.1
116,094	-		EX31_RS04940	0.31	+0.5
116,094	-		EX31_RS04940	0.31	-0.2
116,276	-		EX31_RS04940	0.57	-1.0
116,276	-		EX31_RS04940	0.57	-1.5
116,276	-		EX31_RS04940	0.57	+0.5
116,276	-		EX31_RS04940	0.57	-3.2
116,362	+		EX31_RS04940	0.70	+0.8
116,362	+		EX31_RS04940	0.70	-0.8
116,362	+		EX31_RS04940	0.70	+0.7
116,363	-		EX31_RS04940	0.70	+0.1
116,363	-		EX31_RS04940	0.70	+0.3
116,363	-		EX31_RS04940	0.70	-0.1
116,429	-		EX31_RS04940	0.79	+0.1
116,545	-				-1.5
116,545	-				-0.3
116,545	-				+0.9
116,587	+				-0.2
116,588	-				+0.9
116,588	-				-0.6
116,588	-				-0.2
116,608	+				+1.3