Strain Fitness in Rahnella sp. WP5 around EX31_RS04930

Experiment: D-Mannitol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannitol (C)
110,143	+		EX31_RS04920	0.64	+0.5
110,143	+		EX31_RS04920	0.64	+0.9
110,144	-		EX31_RS04920	0.64	-0.5
110,302	-		EX31_RS04920	0.87	+1.6
110,331	+				+0.2
110,364	+				-0.0
110,365	-				-0.2
110,365	-				-0.2
110,365	-				+0.4
110,365	-				-0.2
110,378	+				-0.1
110,379	-				+0.1
110,386	+				+1.2
110,386	+				-0.7
110,387	-				-0.7
110,400	+				+1.1
110,400	+				-0.9
110,400	+				-1.3
110,401	-				+0.3
110,445	+				+0.0
110,445	+				-1.1
110,445	+				-0.5
110,446	-				-0.3
110,446	-				+0.8
110,446	-				-0.1
110,458	+				+0.9
110,458	+				-0.1
110,459	-				-1.7
110,459	-				+0.1
110,459	-				-0.4
110,463	+				+1.5
110,471	+				+2.3
110,485	+				-0.8
110,486	-				-2.4
110,494	+				+1.2
110,495	-				-1.5
110,612	+		EX31_RS04925	0.22	-0.6
110,631	+		EX31_RS04925	0.25	-1.2
110,632	-		EX31_RS04925	0.25	+1.3
110,689	-		EX31_RS04925	0.35	-1.8
110,700	-		EX31_RS04925	0.37	-1.6
110,700	-		EX31_RS04925	0.37	-0.2
110,700	-		EX31_RS04925	0.37	+1.3
110,783	-		EX31_RS04925	0.52	+0.0
110,853	+		EX31_RS04925	0.64	+0.5
111,057	-				-1.2
111,057	-				-1.6
111,057	-				+0.6
111,057	-				+0.3
111,116	+				+0.3
111,136	+				-0.3
111,136	+				+0.2
111,136	+				+0.0
111,160	-				+0.3
111,219	-				-0.8
111,315	-				+2.1
111,315	-				+0.3
111,411	+		EX31_RS04930	0.14	+0.4
111,411	+		EX31_RS04930	0.14	-0.3
111,411	+		EX31_RS04930	0.14	+0.5
111,429	+		EX31_RS04930	0.15	+0.3
111,429	+		EX31_RS04930	0.15	+0.3
111,430	-		EX31_RS04930	0.15	-0.4
111,430	-		EX31_RS04930	0.15	+0.0
111,502	+		EX31_RS04930	0.19	-1.8
111,503	-		EX31_RS04930	0.19	-2.9
111,521	+		EX31_RS04930	0.20	+0.3
111,521	+		EX31_RS04930	0.20	-0.1
111,522	-		EX31_RS04930	0.20	-0.7
111,538	+		EX31_RS04930	0.20	-1.7
111,539	-		EX31_RS04930	0.20	+1.1
111,578	+		EX31_RS04930	0.22	-0.5
111,578	+		EX31_RS04930	0.22	-0.4
111,579	-		EX31_RS04930	0.22	+0.5
111,624	-		EX31_RS04930	0.25	-0.1
111,624	-		EX31_RS04930	0.25	+0.2
111,635	+		EX31_RS04930	0.25	+0.8
111,636	-		EX31_RS04930	0.25	-0.3
111,636	-		EX31_RS04930	0.25	+0.3
111,641	+		EX31_RS04930	0.25	+0.1
111,641	+		EX31_RS04930	0.25	+0.9
111,641	+		EX31_RS04930	0.25	+0.4
111,641	+		EX31_RS04930	0.25	+1.2
111,641	+		EX31_RS04930	0.25	+0.4
111,642	-		EX31_RS04930	0.25	-1.1
111,642	-		EX31_RS04930	0.25	+0.7
111,776	+		EX31_RS04930	0.32	-0.4
111,777	-		EX31_RS04930	0.32	-2.4
111,777	-		EX31_RS04930	0.32	+0.2
111,777	-		EX31_RS04930	0.32	-1.2
111,777	-		EX31_RS04930	0.32	-0.2
111,777	-		EX31_RS04930	0.32	+0.2
111,777	-		EX31_RS04930	0.32	-0.0
111,777	-		EX31_RS04930	0.32	-0.2
111,777	-		EX31_RS04930	0.32	-0.5
111,889	+		EX31_RS04930	0.37	+1.4
111,890	-		EX31_RS04930	0.37	+0.6
112,007	+		EX31_RS04930	0.43	-0.2
112,007	+		EX31_RS04930	0.43	-1.2
112,008	-		EX31_RS04930	0.43	+0.0
112,110	-		EX31_RS04930	0.48	-1.4
112,110	-		EX31_RS04930	0.48	+0.3
112,155	-		EX31_RS04930	0.50	-0.2
112,175	+		EX31_RS04930	0.51	+0.8
112,220	+		EX31_RS04930	0.53	+0.6
112,220	+		EX31_RS04930	0.53	-2.1
112,220	+		EX31_RS04930	0.53	+0.5
112,221	-		EX31_RS04930	0.53	+0.8
112,255	+		EX31_RS04930	0.55	-0.2
112,278	+		EX31_RS04930	0.56	-0.5
112,278	+		EX31_RS04930	0.56	+0.4
112,278	+		EX31_RS04930	0.56	+0.8
112,279	-		EX31_RS04930	0.56	-0.3
112,279	-		EX31_RS04930	0.56	-0.6
112,279	-		EX31_RS04930	0.56	+0.0
112,279	-		EX31_RS04930	0.56	+0.8
112,279	-		EX31_RS04930	0.56	-1.0
112,279	-		EX31_RS04930	0.56	-1.1
112,279	-		EX31_RS04930	0.56	+1.0
112,353	+		EX31_RS04930	0.60	+0.0
112,553	+		EX31_RS04930	0.69	-0.3
112,553	+		EX31_RS04930	0.69	+0.0
112,553	+		EX31_RS04930	0.69	+0.9
112,553	+		EX31_RS04930	0.69	+0.2
112,553	+		EX31_RS04930	0.69	+1.7
112,553	+		EX31_RS04930	0.69	-0.2
112,553	+		EX31_RS04930	0.69	-1.0
112,553	+		EX31_RS04930	0.69	+0.5
112,553	+		EX31_RS04930	0.69	-0.7
112,553	+		EX31_RS04930	0.69	-0.5
112,554	-		EX31_RS04930	0.69	+0.4
112,554	-		EX31_RS04930	0.69	-0.5
112,554	-		EX31_RS04930	0.69	+1.3
112,590	-		EX31_RS04930	0.71	+0.6
112,590	-		EX31_RS04930	0.71	-0.3
112,620	-		EX31_RS04930	0.72	+0.1
112,620	-		EX31_RS04930	0.72	+0.7
112,631	-		EX31_RS04930	0.73	-0.9
112,720	-		EX31_RS04930	0.77	-0.8
112,737	+		EX31_RS04930	0.78	+0.7
112,737	+		EX31_RS04930	0.78	+2.8
112,738	-		EX31_RS04930	0.78	+1.3
112,739	+		EX31_RS04930	0.78	-2.6
112,739	+		EX31_RS04930	0.78	-0.4
112,740	-		EX31_RS04930	0.78	+0.5
112,740	-		EX31_RS04930	0.78	-0.1
112,796	+		EX31_RS04930	0.81	+1.4
112,796	+		EX31_RS04930	0.81	+0.0
112,797	-		EX31_RS04930	0.81	+0.0
112,840	-		EX31_RS04930	0.83	-0.8
113,010	+				+1.7
113,010	+				+0.3
113,011	-				-0.9
113,127	+				-0.4
113,127	+				-1.0
113,127	+				-0.9
113,128	-				+0.1
113,128	-				-0.6
113,128	-				+0.3
113,128	-				+0.1
113,143	+				-2.1
113,143	+				+1.6
113,144	-				+2.1
113,144	-				-2.2
113,144	-				-0.2
113,201	-				+0.0
113,201	-				+0.2
113,201	-				+0.1
113,231	-				+0.0
113,265	+				-0.4
113,266	-				+0.2
113,266	-				+0.5
113,288	+				-0.4
113,350	+				+1.0
113,350	+				+0.2
113,350	+				-0.5
113,351	-				+2.9
113,351	-				+1.5
113,351	-				+0.1
113,377	+				-0.4
113,378	-				+0.6
113,444	-		EX31_RS04935	0.10	+0.4
113,515	+		EX31_RS04935	0.13	-0.2
113,516	-		EX31_RS04935	0.13	+0.1
113,564	+		EX31_RS04935	0.15	-0.7
113,564	+		EX31_RS04935	0.15	+0.6
113,564	+		EX31_RS04935	0.15	-0.2
113,564	+		EX31_RS04935	0.15	+0.4
113,565	-		EX31_RS04935	0.15	+0.1
113,565	-		EX31_RS04935	0.15	-0.5
113,658	-		EX31_RS04935	0.19	-0.3
113,749	+		EX31_RS04935	0.23	+0.4
113,749	+		EX31_RS04935	0.23	+0.7
113,830	+		EX31_RS04935	0.26	+0.5
113,831	-		EX31_RS04935	0.26	+0.6
113,831	-		EX31_RS04935	0.26	+1.0
113,831	-		EX31_RS04935	0.26	-0.2
113,834	+		EX31_RS04935	0.26	+0.7
113,835	-		EX31_RS04935	0.26	-1.1
113,851	+		EX31_RS04935	0.27	+0.3
113,851	+		EX31_RS04935	0.27	+0.6
113,851	+		EX31_RS04935	0.27	-1.5
113,851	+		EX31_RS04935	0.27	-0.2
113,851	+		EX31_RS04935	0.27	-0.8
113,852	-		EX31_RS04935	0.27	-1.5
113,854	+		EX31_RS04935	0.27	+0.6
113,945	+		EX31_RS04935	0.31	+1.2
113,945	+		EX31_RS04935	0.31	-1.2
113,945	+		EX31_RS04935	0.31	+0.3
113,945	+		EX31_RS04935	0.31	+1.1
113,945	+		EX31_RS04935	0.31	-0.3
113,946	-		EX31_RS04935	0.31	-0.0
113,974	+		EX31_RS04935	0.32	+1.4
113,974	+		EX31_RS04935	0.32	-0.7
113,974	+		EX31_RS04935	0.32	+0.5
113,975	-		EX31_RS04935	0.32	-0.2
113,975	-		EX31_RS04935	0.32	-0.9
113,975	-		EX31_RS04935	0.32	+2.3
113,975	-		EX31_RS04935	0.32	+0.3
113,975	-		EX31_RS04935	0.32	-1.1
113,975	-		EX31_RS04935	0.32	-0.2
113,990	+		EX31_RS04935	0.33	+0.6
113,991	-		EX31_RS04935	0.33	+0.7
113,997	+		EX31_RS04935	0.33	+0.1
113,997	+		EX31_RS04935	0.33	+0.6
113,997	+		EX31_RS04935	0.33	-0.1
113,997	+		EX31_RS04935	0.33	-0.4
113,997	+		EX31_RS04935	0.33	-1.8
113,997	+		EX31_RS04935	0.33	-1.0
113,997	+		EX31_RS04935	0.33	+1.3
113,997	+		EX31_RS04935	0.33	+1.3
113,997	+		EX31_RS04935	0.33	+0.7
113,998	-		EX31_RS04935	0.33	+0.9
113,998	-		EX31_RS04935	0.33	-0.1
113,998	-		EX31_RS04935	0.33	-0.2
113,998	-		EX31_RS04935	0.33	-0.2
114,021	-		EX31_RS04935	0.34	+0.6
114,021	-		EX31_RS04935	0.34	-0.8
114,049	+		EX31_RS04935	0.35	+0.1
114,049	+		EX31_RS04935	0.35	-0.1
114,049	+		EX31_RS04935	0.35	+0.3
114,050	-		EX31_RS04935	0.35	+0.4
114,050	-		EX31_RS04935	0.35	+0.6
114,050	-		EX31_RS04935	0.35	+0.8
114,152	+		EX31_RS04935	0.39	+1.9
114,152	+		EX31_RS04935	0.39	-1.2
114,153	-		EX31_RS04935	0.40	+0.8
114,153	-		EX31_RS04935	0.40	-0.2