Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS22845

Experiment: Glycine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycine (N)
5,590,681	+		CA265_RS22840	0.70	-0.6
5,590,682	-		CA265_RS22840	0.70	+0.2
5,590,797	+		CA265_RS22840	0.74	-0.2
5,590,834	-		CA265_RS22840	0.75	+0.1
5,590,952	-		CA265_RS22840	0.79	-0.6
5,590,989	-		CA265_RS22840	0.80	-1.1
5,591,039	+		CA265_RS22840	0.81	-2.9
5,591,039	+		CA265_RS22840	0.81	+0.1
5,591,039	+		CA265_RS22840	0.81	-0.2
5,591,040	-		CA265_RS22840	0.81	+0.3
5,591,056	+		CA265_RS22840	0.82	-1.2
5,591,057	-		CA265_RS22840	0.82	+0.4
5,591,122	+		CA265_RS22840	0.84	+0.4
5,591,187	-		CA265_RS22840	0.86	-0.3
5,591,202	+		CA265_RS22840	0.87	-0.8
5,591,203	-		CA265_RS22840	0.87	-0.4
5,591,213	-		CA265_RS22840	0.87	+0.6
5,591,267	-		CA265_RS22840	0.89	+0.2
5,591,267	-		CA265_RS22840	0.89	+0.3
5,591,292	-		CA265_RS22840	0.89	-0.1
5,591,292	-		CA265_RS22840	0.89	+0.2
5,591,314	+				-0.5
5,591,356	+				+0.3
5,591,356	+				-0.9
5,591,358	-				+0.4
5,591,361	-				+0.4
5,591,365	+				+0.5
5,591,366	-				-1.4
5,591,418	-				+3.4
5,591,436	+				-1.7
5,591,437	-				-0.6
5,591,443	-				-2.0
5,591,443	-				+0.2
5,591,443	-				-0.6
5,591,443	-				-1.0
5,591,448	-				-0.4
5,591,450	-				-0.5
5,591,488	+				-2.9
5,591,489	-				+1.2
5,591,494	-				-0.3
5,591,494	-				+0.6
5,591,494	-				-0.3
5,591,499	+				+0.8
5,591,545	-				-0.2
5,591,602	+				-1.3
5,591,606	-				+0.0
5,591,614	+				-1.6
5,591,614	+				-0.9
5,591,635	+				-0.7
5,591,635	+				+0.0
5,591,635	+				-0.4
5,591,636	-				-0.2
5,591,636	-				-0.3
5,591,636	-				-0.5
5,591,636	-				-0.7
5,591,637	+				+0.4
5,591,638	-				+0.7
5,591,693	+				+0.1
5,591,699	+				-1.0
5,591,712	+				-1.7
5,591,753	+				-0.9
5,591,827	-				-1.3
5,591,828	+				+1.2
5,591,899	-		CA265_RS22845	0.12	+1.8
5,591,932	-		CA265_RS22845	0.14	-0.1
5,591,952	+		CA265_RS22845	0.15	+0.7
5,591,952	+		CA265_RS22845	0.15	-1.7
5,591,974	-		CA265_RS22845	0.16	+1.0
5,591,974	-		CA265_RS22845	0.16	+0.6
5,591,995	+		CA265_RS22845	0.18	+0.3
5,592,049	-		CA265_RS22845	0.20	+1.0
5,592,128	+		CA265_RS22845	0.25	-2.0
5,592,154	-		CA265_RS22845	0.26	-0.7
5,592,183	+		CA265_RS22845	0.28	-0.3
5,592,187	+		CA265_RS22845	0.28	+0.3
5,592,188	-		CA265_RS22845	0.28	+1.8
5,592,208	+		CA265_RS22845	0.29	+0.9
5,592,232	-		CA265_RS22845	0.30	-1.2
5,592,234	+		CA265_RS22845	0.30	-0.9
5,592,329	+		CA265_RS22845	0.35	+0.2
5,592,372	+		CA265_RS22845	0.38	-0.2
5,592,373	-		CA265_RS22845	0.38	+0.6
5,592,416	+		CA265_RS22845	0.40	-3.6
5,592,417	-		CA265_RS22845	0.40	-0.1
5,592,513	-		CA265_RS22845	0.45	-0.8
5,592,558	+		CA265_RS22845	0.48	+0.3
5,592,558	+		CA265_RS22845	0.48	+0.3
5,592,559	-		CA265_RS22845	0.48	+0.3
5,592,580	-		CA265_RS22845	0.49	-0.1
5,592,593	+		CA265_RS22845	0.49	+0.1
5,592,631	+		CA265_RS22845	0.51	-0.5
5,592,649	-		CA265_RS22845	0.52	-0.3
5,592,655	-		CA265_RS22845	0.53	-0.2
5,592,690	+		CA265_RS22845	0.55	+0.3
5,592,691	-		CA265_RS22845	0.55	-0.1
5,592,702	+		CA265_RS22845	0.55	-0.0
5,592,702	+		CA265_RS22845	0.55	+0.0
5,592,702	+		CA265_RS22845	0.55	+0.8
5,592,706	-		CA265_RS22845	0.55	-0.0
5,592,720	-		CA265_RS22845	0.56	+0.8
5,592,734	-		CA265_RS22845	0.57	+0.2
5,592,734	-		CA265_RS22845	0.57	+0.5
5,592,760	-		CA265_RS22845	0.58	-0.6
5,592,801	+		CA265_RS22845	0.60	+0.5
5,592,818	-		CA265_RS22845	0.61	+0.9
5,592,878	+		CA265_RS22845	0.65	-0.2
5,592,909	-		CA265_RS22845	0.66	+0.1
5,592,910	+		CA265_RS22845	0.66	+0.8
5,592,911	-		CA265_RS22845	0.66	+0.0
5,592,911	-		CA265_RS22845	0.66	+0.4
5,592,975	+		CA265_RS22845	0.70	-0.1
5,593,010	-		CA265_RS22845	0.72	+0.8
5,593,087	-		CA265_RS22845	0.76	-0.8
5,593,093	-		CA265_RS22845	0.76	-0.0
5,593,112	-		CA265_RS22845	0.77	-0.8
5,593,147	-		CA265_RS22845	0.79	-0.6
5,593,189	-		CA265_RS22845	0.81	+0.6
5,593,264	+		CA265_RS22845	0.85	+0.1
5,593,280	-		CA265_RS22845	0.86	-0.9
5,593,336	+		CA265_RS22845	0.89	-1.2
5,593,336	+		CA265_RS22845	0.89	+1.0
5,593,336	+		CA265_RS22845	0.89	-0.3
5,593,339	-		CA265_RS22845	0.89	-0.7
5,593,415	-				-0.5
5,593,416	+				-0.1
5,593,420	+				-0.7
5,593,573	-				-0.3
5,593,573	-				-0.4
5,593,621	+				-0.4
5,593,632	+				+0.0
5,593,787	+				+0.0
5,593,788	-				-0.6
5,593,889	+		CA265_RS22850	0.14	+1.9
5,593,940	-		CA265_RS22850	0.18	-0.3
5,593,940	-		CA265_RS22850	0.18	+0.7
5,593,940	-		CA265_RS22850	0.18	+1.5
5,593,970	+		CA265_RS22850	0.20	-1.1
5,593,970	+		CA265_RS22850	0.20	+0.3
5,593,970	+		CA265_RS22850	0.20	+0.1
5,594,082	+		CA265_RS22850	0.28	+1.2
5,594,106	+				+0.2
5,594,107	-		CA265_RS22850	0.30	-0.3
5,594,136	-		CA265_RS22850	0.33	+0.2
5,594,306	-		CA265_RS22850	0.45	+0.1
5,594,306	-		CA265_RS22850	0.45	-0.8
5,594,308	-		CA265_RS22850	0.46	-0.5
5,594,394	+		CA265_RS22850	0.52	-0.1
5,594,465	+		CA265_RS22850	0.57	+0.6
5,594,505	-		CA265_RS22850	0.60	+0.0
5,594,507	+		CA265_RS22850	0.61	+0.5
5,594,508	-		CA265_RS22850	0.61	+0.4
5,594,526	+		CA265_RS22850	0.62	-0.0
5,594,527	-		CA265_RS22850	0.62	+0.3