Experiment: Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS20665 and CA265_RS20670 are separated by 529 nucleotides CA265_RS20670 and CA265_RS20675 are separated by 10 nucleotides
CA265_RS20665: CA265_RS20665 - hypothetical protein, at 5,113,155 to 5,114,132
_RS20665
CA265_RS20670: CA265_RS20670 - hypothetical protein, at 5,114,662 to 5,115,213
_RS20670
CA265_RS20675: CA265_RS20675 - molybdopterin-guanine dinucleotide biosynthesis protein MobB, at 5,115,224 to 5,116,171
_RS20675
Position (kb) 5114
5115
5116 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5113.792 kb on + strand, within CA265_RS20665 at 5113.862 kb on - strand, within CA265_RS20665 at 5113.930 kb on - strand, within CA265_RS20665 at 5114.023 kb on - strand, within CA265_RS20665 at 5114.032 kb on - strand, within CA265_RS20665 at 5114.099 kb on + strand at 5114.100 kb on - strand at 5114.100 kb on - strand at 5114.108 kb on - strand at 5114.162 kb on + strand at 5114.165 kb on - strand at 5114.196 kb on + strand at 5114.217 kb on - strand at 5114.261 kb on - strand at 5114.265 kb on - strand at 5114.265 kb on - strand at 5114.275 kb on - strand at 5114.280 kb on + strand at 5114.286 kb on + strand at 5114.286 kb on + strand at 5114.286 kb on + strand at 5114.313 kb on - strand at 5114.570 kb on - strand at 5114.634 kb on + strand at 5114.635 kb on - strand at 5114.785 kb on + strand, within CA265_RS20670 at 5114.788 kb on - strand, within CA265_RS20670 at 5114.788 kb on - strand, within CA265_RS20670 at 5114.860 kb on + strand, within CA265_RS20670 at 5114.860 kb on + strand, within CA265_RS20670 at 5114.861 kb on - strand, within CA265_RS20670 at 5114.890 kb on - strand, within CA265_RS20670 at 5115.201 kb on - strand at 5115.220 kb on - strand at 5115.223 kb on + strand at 5115.224 kb on - strand at 5115.285 kb on + strand at 5115.286 kb on - strand at 5115.286 kb on - strand at 5115.290 kb on + strand at 5115.291 kb on - strand at 5115.398 kb on - strand, within CA265_RS20675 at 5115.445 kb on + strand, within CA265_RS20675 at 5115.446 kb on - strand, within CA265_RS20675 at 5115.532 kb on + strand, within CA265_RS20675 at 5115.533 kb on - strand, within CA265_RS20675 at 5115.597 kb on + strand, within CA265_RS20675 at 5115.598 kb on - strand, within CA265_RS20675 at 5115.621 kb on - strand, within CA265_RS20675 at 5115.732 kb on + strand, within CA265_RS20675 at 5115.732 kb on + strand, within CA265_RS20675 at 5115.732 kb on + strand, within CA265_RS20675 at 5115.733 kb on - strand, within CA265_RS20675 at 5115.733 kb on - strand, within CA265_RS20675 at 5115.763 kb on + strand, within CA265_RS20675 at 5115.764 kb on - strand, within CA265_RS20675 at 5115.769 kb on + strand, within CA265_RS20675 at 5116.015 kb on - strand, within CA265_RS20675 at 5116.059 kb on - strand, within CA265_RS20675 at 5116.163 kb on - strand at 5116.187 kb on + strand at 5116.187 kb on + strand at 5116.188 kb on - strand at 5116.188 kb on - strand at 5116.188 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycine (N) remove 5,113,792 + CA265_RS20665 0.65 -0.4 5,113,862 - CA265_RS20665 0.72 +0.6 5,113,930 - CA265_RS20665 0.79 +0.2 5,114,023 - CA265_RS20665 0.89 -0.1 5,114,032 - CA265_RS20665 0.90 -0.6 5,114,099 + -0.6 5,114,100 - +0.6 5,114,100 - -1.0 5,114,108 - -0.0 5,114,162 + -1.5 5,114,165 - -0.0 5,114,196 + -0.3 5,114,217 - +0.1 5,114,261 - -0.5 5,114,265 - -0.8 5,114,265 - -0.5 5,114,275 - +0.4 5,114,280 + -0.5 5,114,286 + +1.8 5,114,286 + -0.8 5,114,286 + -1.3 5,114,313 - +0.5 5,114,570 - +1.3 5,114,634 + -1.8 5,114,635 - +1.3 5,114,785 + CA265_RS20670 0.22 +1.2 5,114,788 - CA265_RS20670 0.23 +1.3 5,114,788 - CA265_RS20670 0.23 +0.3 5,114,860 + CA265_RS20670 0.36 -0.9 5,114,860 + CA265_RS20670 0.36 +0.6 5,114,861 - CA265_RS20670 0.36 +0.4 5,114,890 - CA265_RS20670 0.41 -0.1 5,115,201 - -0.5 5,115,220 - +0.4 5,115,223 + -1.0 5,115,224 - -0.5 5,115,285 + -2.2 5,115,286 - +0.4 5,115,286 - -1.4 5,115,290 + +0.8 5,115,291 - -1.0 5,115,398 - CA265_RS20675 0.18 +1.4 5,115,445 + CA265_RS20675 0.23 -0.3 5,115,446 - CA265_RS20675 0.23 -1.7 5,115,532 + CA265_RS20675 0.32 -0.5 5,115,533 - CA265_RS20675 0.33 -0.8 5,115,597 + CA265_RS20675 0.39 +1.6 5,115,598 - CA265_RS20675 0.39 -0.7 5,115,621 - CA265_RS20675 0.42 -0.3 5,115,732 + CA265_RS20675 0.54 -0.3 5,115,732 + CA265_RS20675 0.54 -0.4 5,115,732 + CA265_RS20675 0.54 -0.1 5,115,733 - CA265_RS20675 0.54 +0.1 5,115,733 - CA265_RS20675 0.54 +0.4 5,115,763 + CA265_RS20675 0.57 -0.4 5,115,764 - CA265_RS20675 0.57 -0.1 5,115,769 + CA265_RS20675 0.57 -0.6 5,116,015 - CA265_RS20675 0.83 +1.3 5,116,059 - CA265_RS20675 0.88 +0.2 5,116,163 - +0.4 5,116,187 + -1.5 5,116,187 + +1.0 5,116,188 - +0.1 5,116,188 - +0.4 5,116,188 - +0.2
Or see this region's nucleotide sequence