Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_30185 and AO356_30190 are separated by 481 nucleotides AO356_30190 and AO356_30195 are separated by 107 nucleotides AO356_30195 and AO356_30200 are separated by 59 nucleotides
AO356_30185: AO356_30185 - hypothetical protein, at 7,045,312 to 7,046,286
_30185
AO356_30190: AO356_30190 - hypothetical protein, at 7,046,768 to 7,047,106
_30190
AO356_30195: AO356_30195 - oxidoreductase, at 7,047,214 to 7,047,957
_30195
AO356_30200: AO356_30200 - aldo/keto reductase, at 7,048,017 to 7,048,967
_30200
Position (kb) 7047
7048 Strain fitness (log2 ratio) -2
-1
0
1 at 7046.420 kb on + strand at 7046.420 kb on + strand at 7046.450 kb on + strand at 7046.450 kb on + strand at 7046.479 kb on + strand at 7046.480 kb on - strand at 7046.608 kb on + strand at 7046.959 kb on + strand, within AO356_30190 at 7046.960 kb on - strand, within AO356_30190 at 7046.960 kb on - strand, within AO356_30190 at 7047.014 kb on + strand, within AO356_30190 at 7047.014 kb on + strand, within AO356_30190 at 7047.015 kb on - strand, within AO356_30190 at 7047.020 kb on + strand, within AO356_30190 at 7047.020 kb on + strand, within AO356_30190 at 7047.020 kb on + strand, within AO356_30190 at 7047.020 kb on + strand, within AO356_30190 at 7047.020 kb on + strand, within AO356_30190 at 7047.020 kb on + strand, within AO356_30190 at 7047.020 kb on + strand, within AO356_30190 at 7047.021 kb on - strand, within AO356_30190 at 7047.021 kb on - strand, within AO356_30190 at 7047.125 kb on + strand at 7047.125 kb on + strand at 7047.125 kb on + strand at 7047.125 kb on + strand at 7047.126 kb on - strand at 7047.126 kb on - strand at 7047.156 kb on + strand at 7047.230 kb on + strand at 7047.230 kb on + strand at 7047.539 kb on + strand, within AO356_30195 at 7047.539 kb on + strand, within AO356_30195 at 7047.624 kb on + strand, within AO356_30195 at 7047.625 kb on - strand, within AO356_30195 at 7047.625 kb on - strand, within AO356_30195 at 7047.644 kb on + strand, within AO356_30195 at 7047.644 kb on + strand, within AO356_30195 at 7047.644 kb on + strand, within AO356_30195 at 7047.671 kb on - strand, within AO356_30195 at 7047.838 kb on + strand, within AO356_30195 at 7047.838 kb on + strand, within AO356_30195 at 7047.838 kb on + strand, within AO356_30195 at 7047.838 kb on + strand, within AO356_30195 at 7047.838 kb on + strand, within AO356_30195 at 7047.839 kb on - strand, within AO356_30195 at 7047.839 kb on - strand, within AO356_30195 at 7047.847 kb on + strand, within AO356_30195 at 7047.848 kb on - strand, within AO356_30195 at 7048.027 kb on + strand at 7048.033 kb on + strand at 7048.034 kb on - strand at 7048.034 kb on - strand at 7048.119 kb on + strand, within AO356_30200 at 7048.120 kb on - strand, within AO356_30200 at 7048.120 kb on - strand, within AO356_30200 at 7048.318 kb on - strand, within AO356_30200 at 7048.372 kb on - strand, within AO356_30200 at 7048.372 kb on - strand, within AO356_30200 at 7048.385 kb on - strand, within AO356_30200 at 7048.490 kb on + strand, within AO356_30200 at 7048.490 kb on + strand, within AO356_30200 at 7048.628 kb on + strand, within AO356_30200 at 7048.629 kb on - strand, within AO356_30200 at 7048.629 kb on - strand, within AO356_30200 at 7048.785 kb on + strand, within AO356_30200 at 7048.786 kb on - strand, within AO356_30200 at 7048.852 kb on + strand, within AO356_30200
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 7,046,420 + -0.6 7,046,420 + -1.3 7,046,450 + -0.1 7,046,450 + +1.6 7,046,479 + -0.8 7,046,480 - +0.4 7,046,608 + +0.2 7,046,959 + AO356_30190 0.56 +0.1 7,046,960 - AO356_30190 0.57 +0.6 7,046,960 - AO356_30190 0.57 +0.4 7,047,014 + AO356_30190 0.73 +0.9 7,047,014 + AO356_30190 0.73 +0.2 7,047,015 - AO356_30190 0.73 -0.4 7,047,020 + AO356_30190 0.74 +0.8 7,047,020 + AO356_30190 0.74 -0.1 7,047,020 + AO356_30190 0.74 +1.2 7,047,020 + AO356_30190 0.74 -0.7 7,047,020 + AO356_30190 0.74 +0.5 7,047,020 + AO356_30190 0.74 -0.1 7,047,020 + AO356_30190 0.74 +0.7 7,047,021 - AO356_30190 0.75 +0.3 7,047,021 - AO356_30190 0.75 +0.2 7,047,125 + -0.5 7,047,125 + +0.6 7,047,125 + +0.0 7,047,125 + -0.2 7,047,126 - +0.6 7,047,126 - -0.0 7,047,156 + +0.0 7,047,230 + -0.3 7,047,230 + -0.9 7,047,539 + AO356_30195 0.44 -0.6 7,047,539 + AO356_30195 0.44 -0.2 7,047,624 + AO356_30195 0.55 -1.2 7,047,625 - AO356_30195 0.55 -0.6 7,047,625 - AO356_30195 0.55 +0.2 7,047,644 + AO356_30195 0.58 -1.8 7,047,644 + AO356_30195 0.58 +0.7 7,047,644 + AO356_30195 0.58 +0.6 7,047,671 - AO356_30195 0.61 -0.9 7,047,838 + AO356_30195 0.84 +0.8 7,047,838 + AO356_30195 0.84 +0.1 7,047,838 + AO356_30195 0.84 +0.6 7,047,838 + AO356_30195 0.84 -0.1 7,047,838 + AO356_30195 0.84 -0.2 7,047,839 - AO356_30195 0.84 -0.2 7,047,839 - AO356_30195 0.84 -0.1 7,047,847 + AO356_30195 0.85 -0.8 7,047,848 - AO356_30195 0.85 -1.1 7,048,027 + +0.3 7,048,033 + +0.3 7,048,034 - +0.1 7,048,034 - -0.4 7,048,119 + AO356_30200 0.11 -0.0 7,048,120 - AO356_30200 0.11 +0.3 7,048,120 - AO356_30200 0.11 +0.6 7,048,318 - AO356_30200 0.32 -0.0 7,048,372 - AO356_30200 0.37 -0.2 7,048,372 - AO356_30200 0.37 +0.8 7,048,385 - AO356_30200 0.39 -0.8 7,048,490 + AO356_30200 0.50 -0.4 7,048,490 + AO356_30200 0.50 +0.2 7,048,628 + AO356_30200 0.64 -0.0 7,048,629 - AO356_30200 0.64 -0.1 7,048,629 - AO356_30200 0.64 -0.0 7,048,785 + AO356_30200 0.81 +0.4 7,048,786 - AO356_30200 0.81 +0.1 7,048,852 + AO356_30200 0.88 -0.3
Or see this region's nucleotide sequence