Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19710 and AO356_19715 overlap by 1 nucleotides AO356_19715 and AO356_19720 are separated by 392 nucleotides
AO356_19710: AO356_19710 - succinyl-CoA synthetase subunit beta, at 4,421,307 to 4,422,473
_19710
AO356_19715: AO356_19715 - succinyl-CoA synthetase subunit alpha, at 4,422,473 to 4,423,357
_19715
AO356_19720: AO356_19720 - branched-chain amino acid ABC transporter substrate-binding protein, at 4,423,750 to 4,425,063
_19720
Position (kb)
4422
4423
4424 Strain fitness (log2 ratio)
-1
0
1 at 4421.557 kb on - strand, within AO356_19710 at 4421.632 kb on - strand, within AO356_19710 at 4422.947 kb on + strand, within AO356_19715 at 4423.355 kb on + strand at 4423.356 kb on - strand at 4423.356 kb on - strand at 4423.356 kb on - strand at 4423.425 kb on + strand at 4423.426 kb on - strand at 4423.529 kb on + strand at 4423.529 kb on + strand at 4423.529 kb on + strand at 4423.529 kb on + strand at 4423.530 kb on - strand at 4423.530 kb on - strand at 4423.530 kb on - strand at 4423.569 kb on - strand at 4423.581 kb on + strand at 4423.581 kb on + strand at 4423.581 kb on + strand at 4423.581 kb on + strand at 4423.581 kb on + strand at 4423.582 kb on - strand at 4423.582 kb on - strand at 4423.582 kb on - strand at 4423.613 kb on + strand at 4423.614 kb on - strand at 4423.719 kb on + strand at 4423.839 kb on + strand at 4424.014 kb on + strand, within AO356_19720 at 4424.015 kb on - strand, within AO356_19720 at 4424.015 kb on - strand, within AO356_19720 at 4424.131 kb on + strand, within AO356_19720 at 4424.131 kb on + strand, within AO356_19720 at 4424.131 kb on + strand, within AO356_19720 at 4424.209 kb on - strand, within AO356_19720 at 4424.287 kb on + strand, within AO356_19720 at 4424.288 kb on - strand, within AO356_19720 at 4424.288 kb on - strand, within AO356_19720 at 4424.327 kb on - strand, within AO356_19720 at 4424.327 kb on - strand, within AO356_19720
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 4,421,557 - AO356_19710 0.21 +0.9 4,421,632 - AO356_19710 0.28 -0.1 4,422,947 + AO356_19715 0.54 +1.1 4,423,355 + +0.7 4,423,356 - +0.5 4,423,356 - +0.5 4,423,356 - +0.2 4,423,425 + -0.4 4,423,426 - -0.5 4,423,529 + +0.6 4,423,529 + +0.2 4,423,529 + -0.5 4,423,529 + -0.9 4,423,530 - -0.2 4,423,530 - +0.4 4,423,530 - +1.3 4,423,569 - +0.1 4,423,581 + +0.2 4,423,581 + +0.3 4,423,581 + -0.4 4,423,581 + -0.3 4,423,581 + -0.2 4,423,582 - +1.1 4,423,582 - +1.3 4,423,582 - +0.9 4,423,613 + -1.3 4,423,614 - +0.7 4,423,719 + -0.2 4,423,839 + +1.0 4,424,014 + AO356_19720 0.20 +0.1 4,424,015 - AO356_19720 0.20 +0.7 4,424,015 - AO356_19720 0.20 -0.0 4,424,131 + AO356_19720 0.29 +1.1 4,424,131 + AO356_19720 0.29 -0.1 4,424,131 + AO356_19720 0.29 +1.0 4,424,209 - AO356_19720 0.35 +0.4 4,424,287 + AO356_19720 0.41 -0.3 4,424,288 - AO356_19720 0.41 +0.8 4,424,288 - AO356_19720 0.41 -0.1 4,424,327 - AO356_19720 0.44 +1.4 4,424,327 - AO356_19720 0.44 -0.1
Or see this region's nucleotide sequence