Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_17810 and AO356_17815 are separated by 452 nucleotides
AO356_17810: AO356_17810 - fumarate hydratase, at 4,018,060 to 4,019,583
_17810
AO356_17815: AO356_17815 - hypothetical protein, at 4,020,036 to 4,021,142
_17815
Position (kb)
4018
4019
4020 Strain fitness (log2 ratio)
-2
-1
0
1 at 4017.109 kb on - strand at 4017.109 kb on - strand at 4017.109 kb on - strand at 4017.967 kb on + strand at 4017.968 kb on - strand at 4017.968 kb on - strand at 4017.968 kb on - strand at 4017.970 kb on + strand at 4017.970 kb on + strand at 4017.970 kb on + strand at 4017.970 kb on + strand at 4017.970 kb on + strand at 4017.971 kb on - strand at 4017.971 kb on - strand at 4017.971 kb on - strand at 4017.971 kb on - strand at 4017.971 kb on - strand at 4017.971 kb on - strand at 4017.976 kb on + strand at 4017.976 kb on + strand at 4017.976 kb on + strand at 4017.976 kb on + strand at 4017.976 kb on + strand at 4017.976 kb on + strand at 4017.976 kb on + strand at 4017.976 kb on + strand at 4017.976 kb on + strand at 4017.977 kb on - strand at 4017.977 kb on - strand at 4017.977 kb on - strand at 4017.977 kb on - strand at 4017.977 kb on - strand at 4017.977 kb on - strand at 4017.977 kb on - strand at 4017.983 kb on - strand at 4018.062 kb on - strand at 4018.062 kb on - strand at 4019.519 kb on + strand at 4019.620 kb on - strand at 4019.620 kb on - strand at 4019.664 kb on + strand at 4019.665 kb on - strand at 4019.665 kb on - strand at 4019.665 kb on - strand at 4019.697 kb on - strand at 4019.713 kb on - strand at 4019.713 kb on - strand at 4019.714 kb on + strand at 4019.715 kb on - strand at 4019.746 kb on + strand at 4019.747 kb on - strand at 4019.747 kb on - strand at 4019.828 kb on - strand at 4019.861 kb on + strand at 4019.862 kb on - strand at 4019.862 kb on - strand at 4019.862 kb on - strand at 4019.888 kb on - strand at 4019.959 kb on - strand at 4019.959 kb on - strand at 4019.968 kb on + strand at 4019.993 kb on - strand at 4019.993 kb on - strand at 4019.993 kb on - strand at 4020.096 kb on + strand at 4020.144 kb on + strand at 4020.144 kb on + strand at 4020.144 kb on + strand at 4020.144 kb on + strand at 4020.144 kb on + strand at 4020.145 kb on - strand at 4020.145 kb on - strand at 4020.145 kb on - strand at 4020.145 kb on - strand at 4020.145 kb on - strand at 4020.221 kb on + strand, within AO356_17815 at 4020.221 kb on + strand, within AO356_17815 at 4020.221 kb on + strand, within AO356_17815 at 4020.222 kb on - strand, within AO356_17815 at 4020.222 kb on - strand, within AO356_17815 at 4020.222 kb on - strand, within AO356_17815 at 4020.348 kb on + strand, within AO356_17815 at 4020.348 kb on + strand, within AO356_17815 at 4020.348 kb on + strand, within AO356_17815 at 4020.349 kb on - strand, within AO356_17815 at 4020.349 kb on - strand, within AO356_17815 at 4020.349 kb on - strand, within AO356_17815 at 4020.456 kb on + strand, within AO356_17815 at 4020.456 kb on + strand, within AO356_17815 at 4020.457 kb on - strand, within AO356_17815 at 4020.457 kb on - strand, within AO356_17815 at 4020.480 kb on - strand, within AO356_17815 at 4020.480 kb on - strand, within AO356_17815 at 4020.538 kb on - strand, within AO356_17815 at 4020.547 kb on - strand, within AO356_17815 at 4020.547 kb on - strand, within AO356_17815
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 4,017,109 - -0.1 4,017,109 - +0.8 4,017,109 - -0.2 4,017,967 + +0.8 4,017,968 - -0.3 4,017,968 - +0.4 4,017,968 - +0.1 4,017,970 + +1.1 4,017,970 + +1.2 4,017,970 + -1.0 4,017,970 + -0.2 4,017,970 + -0.3 4,017,971 - -1.3 4,017,971 - -0.5 4,017,971 - -1.9 4,017,971 - +0.0 4,017,971 - -0.1 4,017,971 - +0.1 4,017,976 + -0.7 4,017,976 + +0.7 4,017,976 + -0.1 4,017,976 + -0.1 4,017,976 + +0.9 4,017,976 + +0.3 4,017,976 + +0.4 4,017,976 + -0.2 4,017,976 + +0.6 4,017,977 - -0.5 4,017,977 - -0.6 4,017,977 - +0.2 4,017,977 - +1.0 4,017,977 - -0.2 4,017,977 - +1.0 4,017,977 - +0.4 4,017,983 - -0.0 4,018,062 - +0.2 4,018,062 - -0.7 4,019,519 + +0.6 4,019,620 - +1.3 4,019,620 - -0.2 4,019,664 + +0.3 4,019,665 - -0.2 4,019,665 - +0.7 4,019,665 - +0.5 4,019,697 - -0.1 4,019,713 - +0.1 4,019,713 - -0.4 4,019,714 + -0.3 4,019,715 - -0.3 4,019,746 + -0.9 4,019,747 - -0.3 4,019,747 - +0.9 4,019,828 - -0.7 4,019,861 + +0.8 4,019,862 - -0.4 4,019,862 - +0.4 4,019,862 - +0.3 4,019,888 - -0.7 4,019,959 - -0.3 4,019,959 - -1.0 4,019,968 + +1.2 4,019,993 - +0.4 4,019,993 - +0.4 4,019,993 - +0.8 4,020,096 + -0.5 4,020,144 + -0.4 4,020,144 + -0.0 4,020,144 + +0.6 4,020,144 + -0.5 4,020,144 + -0.0 4,020,145 - -0.0 4,020,145 - +0.1 4,020,145 - -1.4 4,020,145 - -0.9 4,020,145 - +0.5 4,020,221 + AO356_17815 0.17 -0.1 4,020,221 + AO356_17815 0.17 +1.1 4,020,221 + AO356_17815 0.17 +0.8 4,020,222 - AO356_17815 0.17 -0.6 4,020,222 - AO356_17815 0.17 -0.2 4,020,222 - AO356_17815 0.17 -0.5 4,020,348 + AO356_17815 0.28 -0.6 4,020,348 + AO356_17815 0.28 +0.1 4,020,348 + AO356_17815 0.28 +0.5 4,020,349 - AO356_17815 0.28 -0.4 4,020,349 - AO356_17815 0.28 +0.6 4,020,349 - AO356_17815 0.28 -0.1 4,020,456 + AO356_17815 0.38 -0.5 4,020,456 + AO356_17815 0.38 -0.3 4,020,457 - AO356_17815 0.38 +0.4 4,020,457 - AO356_17815 0.38 +0.6 4,020,480 - AO356_17815 0.40 +0.8 4,020,480 - AO356_17815 0.40 -0.4 4,020,538 - AO356_17815 0.45 +1.3 4,020,547 - AO356_17815 0.46 +0.5 4,020,547 - AO356_17815 0.46 +1.2
Or see this region's nucleotide sequence