Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_14045 and AO356_14050 are separated by 197 nucleotides AO356_14050 and AO356_14055 are separated by 101 nucleotides
AO356_14045: AO356_14045 - hypothetical protein, at 3,187,446 to 3,188,819
_14045
AO356_14050: AO356_14050 - glutathione S-transferase, at 3,189,017 to 3,189,646
_14050
AO356_14055: AO356_14055 - hexuronate transporter, at 3,189,748 to 3,191,046
_14055
Position (kb)
3189
3190 Strain fitness (log2 ratio)
-2
-1
0
1 at 3188.175 kb on + strand, within AO356_14045 at 3188.175 kb on + strand, within AO356_14045 at 3188.175 kb on + strand, within AO356_14045 at 3188.175 kb on + strand, within AO356_14045 at 3188.175 kb on + strand, within AO356_14045 at 3188.175 kb on + strand, within AO356_14045 at 3188.175 kb on + strand, within AO356_14045 at 3188.175 kb on + strand, within AO356_14045 at 3188.175 kb on + strand, within AO356_14045 at 3188.175 kb on + strand, within AO356_14045 at 3188.175 kb on + strand, within AO356_14045 at 3188.176 kb on - strand, within AO356_14045 at 3188.176 kb on - strand, within AO356_14045 at 3188.176 kb on - strand, within AO356_14045 at 3188.176 kb on - strand, within AO356_14045 at 3188.176 kb on - strand, within AO356_14045 at 3188.346 kb on + strand, within AO356_14045 at 3188.346 kb on + strand, within AO356_14045 at 3188.347 kb on - strand, within AO356_14045 at 3188.373 kb on + strand, within AO356_14045 at 3188.373 kb on + strand, within AO356_14045 at 3188.373 kb on + strand, within AO356_14045 at 3188.373 kb on + strand, within AO356_14045 at 3188.373 kb on + strand, within AO356_14045 at 3188.373 kb on + strand, within AO356_14045 at 3188.374 kb on - strand, within AO356_14045 at 3188.374 kb on - strand, within AO356_14045 at 3188.374 kb on - strand, within AO356_14045 at 3188.457 kb on + strand, within AO356_14045 at 3188.491 kb on - strand, within AO356_14045 at 3188.539 kb on - strand, within AO356_14045 at 3188.580 kb on + strand, within AO356_14045 at 3188.580 kb on + strand, within AO356_14045 at 3188.580 kb on + strand, within AO356_14045 at 3188.581 kb on - strand, within AO356_14045 at 3188.581 kb on - strand, within AO356_14045 at 3188.581 kb on - strand, within AO356_14045 at 3188.581 kb on - strand, within AO356_14045 at 3188.581 kb on - strand, within AO356_14045 at 3188.646 kb on + strand, within AO356_14045 at 3188.646 kb on + strand, within AO356_14045 at 3188.646 kb on + strand, within AO356_14045 at 3188.647 kb on - strand, within AO356_14045 at 3188.647 kb on - strand, within AO356_14045 at 3188.658 kb on + strand, within AO356_14045 at 3188.658 kb on + strand, within AO356_14045 at 3188.682 kb on + strand at 3188.682 kb on + strand at 3188.682 kb on + strand at 3188.682 kb on + strand at 3188.683 kb on - strand at 3189.018 kb on + strand at 3189.018 kb on + strand at 3189.414 kb on + strand, within AO356_14050 at 3189.684 kb on + strand at 3190.010 kb on + strand, within AO356_14055 at 3190.010 kb on + strand, within AO356_14055 at 3190.010 kb on + strand, within AO356_14055 at 3190.010 kb on + strand, within AO356_14055 at 3190.011 kb on - strand, within AO356_14055 at 3190.073 kb on + strand, within AO356_14055 at 3190.096 kb on - strand, within AO356_14055 at 3190.096 kb on - strand, within AO356_14055 at 3190.172 kb on + strand, within AO356_14055 at 3190.172 kb on + strand, within AO356_14055 at 3190.172 kb on + strand, within AO356_14055 at 3190.172 kb on + strand, within AO356_14055 at 3190.172 kb on + strand, within AO356_14055 at 3190.172 kb on + strand, within AO356_14055 at 3190.173 kb on - strand, within AO356_14055 at 3190.173 kb on - strand, within AO356_14055 at 3190.173 kb on - strand, within AO356_14055 at 3190.173 kb on - strand, within AO356_14055 at 3190.173 kb on - strand, within AO356_14055 at 3190.176 kb on + strand, within AO356_14055 at 3190.176 kb on + strand, within AO356_14055 at 3190.176 kb on + strand, within AO356_14055 at 3190.176 kb on + strand, within AO356_14055 at 3190.177 kb on - strand, within AO356_14055 at 3190.177 kb on - strand, within AO356_14055 at 3190.177 kb on - strand, within AO356_14055 at 3190.177 kb on - strand, within AO356_14055 at 3190.292 kb on + strand, within AO356_14055 at 3190.292 kb on + strand, within AO356_14055 at 3190.292 kb on + strand, within AO356_14055 at 3190.361 kb on + strand, within AO356_14055 at 3190.361 kb on + strand, within AO356_14055 at 3190.448 kb on + strand, within AO356_14055 at 3190.448 kb on + strand, within AO356_14055 at 3190.449 kb on - strand, within AO356_14055 at 3190.449 kb on - strand, within AO356_14055 at 3190.449 kb on - strand, within AO356_14055 at 3190.449 kb on - strand, within AO356_14055 at 3190.496 kb on + strand, within AO356_14055 at 3190.497 kb on - strand, within AO356_14055 at 3190.497 kb on - strand, within AO356_14055
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 3,188,175 + AO356_14045 0.53 -0.1 3,188,175 + AO356_14045 0.53 -0.3 3,188,175 + AO356_14045 0.53 +0.0 3,188,175 + AO356_14045 0.53 -0.7 3,188,175 + AO356_14045 0.53 +0.0 3,188,175 + AO356_14045 0.53 +0.5 3,188,175 + AO356_14045 0.53 +0.1 3,188,175 + AO356_14045 0.53 +0.8 3,188,175 + AO356_14045 0.53 -1.6 3,188,175 + AO356_14045 0.53 +0.7 3,188,175 + AO356_14045 0.53 +0.2 3,188,176 - AO356_14045 0.53 +1.4 3,188,176 - AO356_14045 0.53 +0.2 3,188,176 - AO356_14045 0.53 -0.5 3,188,176 - AO356_14045 0.53 -0.3 3,188,176 - AO356_14045 0.53 -0.1 3,188,346 + AO356_14045 0.66 +0.7 3,188,346 + AO356_14045 0.66 -1.3 3,188,347 - AO356_14045 0.66 +0.0 3,188,373 + AO356_14045 0.67 +0.6 3,188,373 + AO356_14045 0.67 -0.1 3,188,373 + AO356_14045 0.67 -0.6 3,188,373 + AO356_14045 0.67 +0.3 3,188,373 + AO356_14045 0.67 -0.4 3,188,373 + AO356_14045 0.67 +0.3 3,188,374 - AO356_14045 0.68 -0.0 3,188,374 - AO356_14045 0.68 +0.6 3,188,374 - AO356_14045 0.68 -0.0 3,188,457 + AO356_14045 0.74 -1.9 3,188,491 - AO356_14045 0.76 -0.4 3,188,539 - AO356_14045 0.80 -0.9 3,188,580 + AO356_14045 0.83 -0.2 3,188,580 + AO356_14045 0.83 -1.6 3,188,580 + AO356_14045 0.83 -0.4 3,188,581 - AO356_14045 0.83 +0.0 3,188,581 - AO356_14045 0.83 -0.1 3,188,581 - AO356_14045 0.83 +0.4 3,188,581 - AO356_14045 0.83 -0.7 3,188,581 - AO356_14045 0.83 -0.1 3,188,646 + AO356_14045 0.87 -0.5 3,188,646 + AO356_14045 0.87 -0.2 3,188,646 + AO356_14045 0.87 -0.1 3,188,647 - AO356_14045 0.87 -0.0 3,188,647 - AO356_14045 0.87 +0.2 3,188,658 + AO356_14045 0.88 +0.8 3,188,658 + AO356_14045 0.88 -1.0 3,188,682 + +0.5 3,188,682 + +0.8 3,188,682 + +0.0 3,188,682 + +0.8 3,188,683 - +0.4 3,189,018 + +0.1 3,189,018 + -0.6 3,189,414 + AO356_14050 0.63 -0.8 3,189,684 + -0.6 3,190,010 + AO356_14055 0.20 -0.3 3,190,010 + AO356_14055 0.20 -0.9 3,190,010 + AO356_14055 0.20 +1.2 3,190,010 + AO356_14055 0.20 +0.6 3,190,011 - AO356_14055 0.20 +0.5 3,190,073 + AO356_14055 0.25 +0.1 3,190,096 - AO356_14055 0.27 -0.5 3,190,096 - AO356_14055 0.27 +0.5 3,190,172 + AO356_14055 0.33 +0.8 3,190,172 + AO356_14055 0.33 -0.6 3,190,172 + AO356_14055 0.33 -1.7 3,190,172 + AO356_14055 0.33 -0.1 3,190,172 + AO356_14055 0.33 -0.8 3,190,172 + AO356_14055 0.33 +0.1 3,190,173 - AO356_14055 0.33 -0.0 3,190,173 - AO356_14055 0.33 +0.5 3,190,173 - AO356_14055 0.33 -0.5 3,190,173 - AO356_14055 0.33 -0.7 3,190,173 - AO356_14055 0.33 +0.6 3,190,176 + AO356_14055 0.33 -0.1 3,190,176 + AO356_14055 0.33 +0.3 3,190,176 + AO356_14055 0.33 -0.2 3,190,176 + AO356_14055 0.33 +0.4 3,190,177 - AO356_14055 0.33 +0.6 3,190,177 - AO356_14055 0.33 -0.8 3,190,177 - AO356_14055 0.33 -1.1 3,190,177 - AO356_14055 0.33 +0.0 3,190,292 + AO356_14055 0.42 +0.4 3,190,292 + AO356_14055 0.42 -0.1 3,190,292 + AO356_14055 0.42 +0.6 3,190,361 + AO356_14055 0.47 +0.0 3,190,361 + AO356_14055 0.47 +0.1 3,190,448 + AO356_14055 0.54 -0.0 3,190,448 + AO356_14055 0.54 +0.2 3,190,449 - AO356_14055 0.54 +0.4 3,190,449 - AO356_14055 0.54 +0.0 3,190,449 - AO356_14055 0.54 +0.2 3,190,449 - AO356_14055 0.54 -0.8 3,190,496 + AO356_14055 0.58 +0.1 3,190,497 - AO356_14055 0.58 +0.3 3,190,497 - AO356_14055 0.58 -0.9
Or see this region's nucleotide sequence