Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04760 and AO356_04765 overlap by 4 nucleotides AO356_04765 and AO356_04770 are separated by 140 nucleotides
AO356_04760: AO356_04760 - MFS transporter, at 1,072,136 to 1,073,299
_04760
AO356_04765: AO356_04765 - lactaldehyde reductase, at 1,073,296 to 1,074,444
_04765
AO356_04770: AO356_04770 - hypothetical protein, at 1,074,585 to 1,075,604
_04770
Position (kb)
1073
1074
1075 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1072.373 kb on + strand, within AO356_04760 at 1072.373 kb on + strand, within AO356_04760 at 1072.373 kb on + strand, within AO356_04760 at 1072.373 kb on + strand, within AO356_04760 at 1072.373 kb on + strand, within AO356_04760 at 1072.373 kb on + strand, within AO356_04760 at 1072.374 kb on - strand, within AO356_04760 at 1072.374 kb on - strand, within AO356_04760 at 1072.374 kb on - strand, within AO356_04760 at 1072.374 kb on - strand, within AO356_04760 at 1072.374 kb on - strand, within AO356_04760 at 1072.374 kb on - strand, within AO356_04760 at 1072.374 kb on - strand, within AO356_04760 at 1072.462 kb on + strand, within AO356_04760 at 1072.575 kb on - strand, within AO356_04760 at 1072.575 kb on - strand, within AO356_04760 at 1072.724 kb on + strand, within AO356_04760 at 1072.725 kb on - strand, within AO356_04760 at 1072.734 kb on + strand, within AO356_04760 at 1072.735 kb on - strand, within AO356_04760 at 1072.735 kb on - strand, within AO356_04760 at 1072.735 kb on - strand, within AO356_04760 at 1072.791 kb on + strand, within AO356_04760 at 1072.859 kb on + strand, within AO356_04760 at 1072.859 kb on + strand, within AO356_04760 at 1072.893 kb on - strand, within AO356_04760 at 1072.968 kb on + strand, within AO356_04760 at 1072.969 kb on - strand, within AO356_04760 at 1073.048 kb on + strand, within AO356_04760 at 1073.049 kb on - strand, within AO356_04760 at 1073.049 kb on - strand, within AO356_04760 at 1073.297 kb on + strand at 1073.297 kb on + strand at 1073.298 kb on - strand at 1073.298 kb on - strand at 1073.478 kb on + strand, within AO356_04765 at 1073.479 kb on - strand, within AO356_04765 at 1073.518 kb on - strand, within AO356_04765 at 1073.518 kb on - strand, within AO356_04765 at 1073.584 kb on + strand, within AO356_04765 at 1073.584 kb on + strand, within AO356_04765 at 1073.584 kb on + strand, within AO356_04765 at 1073.584 kb on + strand, within AO356_04765 at 1073.584 kb on + strand, within AO356_04765 at 1073.584 kb on + strand, within AO356_04765 at 1073.585 kb on - strand, within AO356_04765 at 1073.585 kb on - strand, within AO356_04765 at 1073.585 kb on - strand, within AO356_04765 at 1073.585 kb on - strand, within AO356_04765 at 1073.585 kb on - strand, within AO356_04765 at 1073.585 kb on - strand, within AO356_04765 at 1073.585 kb on - strand, within AO356_04765 at 1073.585 kb on - strand, within AO356_04765 at 1073.585 kb on - strand, within AO356_04765 at 1073.585 kb on - strand, within AO356_04765 at 1073.714 kb on + strand, within AO356_04765 at 1073.715 kb on - strand, within AO356_04765 at 1073.840 kb on + strand, within AO356_04765 at 1073.840 kb on + strand, within AO356_04765 at 1073.840 kb on + strand, within AO356_04765 at 1073.840 kb on + strand, within AO356_04765 at 1073.840 kb on + strand, within AO356_04765 at 1073.840 kb on + strand, within AO356_04765 at 1073.840 kb on + strand, within AO356_04765 at 1073.840 kb on + strand, within AO356_04765 at 1073.840 kb on + strand, within AO356_04765 at 1073.841 kb on - strand, within AO356_04765 at 1073.841 kb on - strand, within AO356_04765 at 1073.841 kb on - strand, within AO356_04765 at 1073.841 kb on - strand, within AO356_04765 at 1073.841 kb on - strand, within AO356_04765 at 1073.841 kb on - strand, within AO356_04765 at 1073.841 kb on - strand, within AO356_04765 at 1073.841 kb on - strand, within AO356_04765 at 1073.841 kb on - strand, within AO356_04765 at 1073.841 kb on - strand, within AO356_04765 at 1073.841 kb on - strand, within AO356_04765 at 1073.841 kb on - strand, within AO356_04765 at 1073.841 kb on - strand, within AO356_04765 at 1074.089 kb on + strand, within AO356_04765 at 1074.089 kb on + strand, within AO356_04765 at 1074.089 kb on + strand, within AO356_04765 at 1074.089 kb on + strand, within AO356_04765 at 1074.090 kb on - strand, within AO356_04765 at 1074.090 kb on - strand, within AO356_04765 at 1074.090 kb on - strand, within AO356_04765 at 1074.362 kb on + strand at 1074.363 kb on - strand at 1074.363 kb on - strand at 1074.435 kb on + strand at 1074.436 kb on - strand at 1074.462 kb on - strand at 1074.498 kb on + strand at 1074.603 kb on + strand at 1074.603 kb on + strand at 1074.603 kb on + strand at 1074.603 kb on + strand at 1074.604 kb on - strand at 1074.885 kb on + strand, within AO356_04770 at 1074.886 kb on - strand, within AO356_04770 at 1074.888 kb on + strand, within AO356_04770 at 1075.017 kb on + strand, within AO356_04770 at 1075.017 kb on + strand, within AO356_04770 at 1075.017 kb on + strand, within AO356_04770 at 1075.017 kb on + strand, within AO356_04770 at 1075.018 kb on - strand, within AO356_04770 at 1075.018 kb on - strand, within AO356_04770 at 1075.032 kb on + strand, within AO356_04770 at 1075.032 kb on + strand, within AO356_04770 at 1075.032 kb on + strand, within AO356_04770 at 1075.033 kb on - strand, within AO356_04770 at 1075.033 kb on - strand, within AO356_04770 at 1075.033 kb on - strand, within AO356_04770 at 1075.033 kb on - strand, within AO356_04770 at 1075.033 kb on - strand, within AO356_04770 at 1075.033 kb on - strand, within AO356_04770 at 1075.137 kb on + strand, within AO356_04770 at 1075.138 kb on - strand, within AO356_04770 at 1075.323 kb on + strand, within AO356_04770 at 1075.324 kb on - strand, within AO356_04770 at 1075.338 kb on + strand, within AO356_04770
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 1,072,373 + AO356_04760 0.20 -1.3 1,072,373 + AO356_04760 0.20 +0.4 1,072,373 + AO356_04760 0.20 -0.3 1,072,373 + AO356_04760 0.20 +1.3 1,072,373 + AO356_04760 0.20 -0.5 1,072,373 + AO356_04760 0.20 +0.4 1,072,374 - AO356_04760 0.20 -0.8 1,072,374 - AO356_04760 0.20 -0.2 1,072,374 - AO356_04760 0.20 +0.2 1,072,374 - AO356_04760 0.20 -1.1 1,072,374 - AO356_04760 0.20 +0.2 1,072,374 - AO356_04760 0.20 -0.6 1,072,374 - AO356_04760 0.20 -0.1 1,072,462 + AO356_04760 0.28 -0.1 1,072,575 - AO356_04760 0.38 -0.1 1,072,575 - AO356_04760 0.38 +2.2 1,072,724 + AO356_04760 0.51 -0.3 1,072,725 - AO356_04760 0.51 -0.4 1,072,734 + AO356_04760 0.51 +0.2 1,072,735 - AO356_04760 0.51 +0.3 1,072,735 - AO356_04760 0.51 +0.1 1,072,735 - AO356_04760 0.51 +0.2 1,072,791 + AO356_04760 0.56 +0.6 1,072,859 + AO356_04760 0.62 -0.2 1,072,859 + AO356_04760 0.62 -0.5 1,072,893 - AO356_04760 0.65 +0.8 1,072,968 + AO356_04760 0.71 -0.1 1,072,969 - AO356_04760 0.72 +0.5 1,073,048 + AO356_04760 0.78 -0.3 1,073,049 - AO356_04760 0.78 +0.5 1,073,049 - AO356_04760 0.78 -0.2 1,073,297 + -0.3 1,073,297 + +0.1 1,073,298 - +0.1 1,073,298 - +0.3 1,073,478 + AO356_04765 0.16 +0.2 1,073,479 - AO356_04765 0.16 +0.6 1,073,518 - AO356_04765 0.19 +0.3 1,073,518 - AO356_04765 0.19 +0.9 1,073,584 + AO356_04765 0.25 -0.3 1,073,584 + AO356_04765 0.25 +0.6 1,073,584 + AO356_04765 0.25 +0.0 1,073,584 + AO356_04765 0.25 -0.2 1,073,584 + AO356_04765 0.25 -0.7 1,073,584 + AO356_04765 0.25 +0.6 1,073,585 - AO356_04765 0.25 -0.4 1,073,585 - AO356_04765 0.25 -0.1 1,073,585 - AO356_04765 0.25 +1.3 1,073,585 - AO356_04765 0.25 +0.3 1,073,585 - AO356_04765 0.25 -0.2 1,073,585 - AO356_04765 0.25 -0.2 1,073,585 - AO356_04765 0.25 -0.8 1,073,585 - AO356_04765 0.25 +0.4 1,073,585 - AO356_04765 0.25 -0.4 1,073,585 - AO356_04765 0.25 +0.5 1,073,714 + AO356_04765 0.36 +0.1 1,073,715 - AO356_04765 0.36 +0.5 1,073,840 + AO356_04765 0.47 +0.4 1,073,840 + AO356_04765 0.47 +0.2 1,073,840 + AO356_04765 0.47 +0.1 1,073,840 + AO356_04765 0.47 +1.1 1,073,840 + AO356_04765 0.47 -0.2 1,073,840 + AO356_04765 0.47 +0.1 1,073,840 + AO356_04765 0.47 -0.5 1,073,840 + AO356_04765 0.47 +0.2 1,073,840 + AO356_04765 0.47 -0.2 1,073,841 - AO356_04765 0.47 +0.3 1,073,841 - AO356_04765 0.47 -0.9 1,073,841 - AO356_04765 0.47 -0.0 1,073,841 - AO356_04765 0.47 -0.3 1,073,841 - AO356_04765 0.47 -0.2 1,073,841 - AO356_04765 0.47 -0.9 1,073,841 - AO356_04765 0.47 +0.1 1,073,841 - AO356_04765 0.47 +0.7 1,073,841 - AO356_04765 0.47 -0.2 1,073,841 - AO356_04765 0.47 +0.1 1,073,841 - AO356_04765 0.47 +0.0 1,073,841 - AO356_04765 0.47 +0.0 1,073,841 - AO356_04765 0.47 -0.2 1,074,089 + AO356_04765 0.69 -1.8 1,074,089 + AO356_04765 0.69 +0.1 1,074,089 + AO356_04765 0.69 +0.0 1,074,089 + AO356_04765 0.69 +0.1 1,074,090 - AO356_04765 0.69 -0.3 1,074,090 - AO356_04765 0.69 -0.2 1,074,090 - AO356_04765 0.69 -0.8 1,074,362 + -0.0 1,074,363 - -0.9 1,074,363 - -0.1 1,074,435 + -0.2 1,074,436 - -0.1 1,074,462 - +0.5 1,074,498 + +0.5 1,074,603 + -0.2 1,074,603 + +0.2 1,074,603 + -1.4 1,074,603 + +0.3 1,074,604 - +0.4 1,074,885 + AO356_04770 0.29 +0.2 1,074,886 - AO356_04770 0.30 -0.1 1,074,888 + AO356_04770 0.30 +0.0 1,075,017 + AO356_04770 0.42 -0.0 1,075,017 + AO356_04770 0.42 +0.3 1,075,017 + AO356_04770 0.42 -0.3 1,075,017 + AO356_04770 0.42 -0.3 1,075,018 - AO356_04770 0.42 -0.2 1,075,018 - AO356_04770 0.42 +0.3 1,075,032 + AO356_04770 0.44 -0.7 1,075,032 + AO356_04770 0.44 +0.2 1,075,032 + AO356_04770 0.44 +0.1 1,075,033 - AO356_04770 0.44 -0.1 1,075,033 - AO356_04770 0.44 +0.4 1,075,033 - AO356_04770 0.44 -0.5 1,075,033 - AO356_04770 0.44 +0.2 1,075,033 - AO356_04770 0.44 -0.1 1,075,033 - AO356_04770 0.44 -0.1 1,075,137 + AO356_04770 0.54 +1.5 1,075,138 - AO356_04770 0.54 -1.7 1,075,323 + AO356_04770 0.72 -1.5 1,075,324 - AO356_04770 0.72 +0.3 1,075,338 + AO356_04770 0.74 -0.1
Or see this region's nucleotide sequence