Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04490 and AO356_04495 are separated by 333 nucleotides AO356_04495 and AO356_04500 are separated by 270 nucleotides AO356_04500 and AO356_04505 are separated by 373 nucleotides
AO356_04490: AO356_04490 - chemotaxis protein, at 1,015,285 to 1,016,919
_04490
AO356_04495: AO356_04495 - short-chain dehydrogenase, at 1,017,253 to 1,017,528
_04495
AO356_04500: AO356_04500 - addiction module antitoxin, at 1,017,799 to 1,018,107
_04500
AO356_04505: AO356_04505 - hypothetical protein, at 1,018,481 to 1,019,590
_04505
Position (kb)
1017
1018 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1016.266 kb on - strand, within AO356_04490 at 1016.295 kb on + strand, within AO356_04490 at 1016.295 kb on + strand, within AO356_04490 at 1016.296 kb on - strand, within AO356_04490 at 1016.296 kb on - strand, within AO356_04490 at 1016.485 kb on - strand, within AO356_04490 at 1016.503 kb on + strand, within AO356_04490 at 1016.504 kb on - strand, within AO356_04490 at 1016.504 kb on - strand, within AO356_04490 at 1016.609 kb on + strand, within AO356_04490 at 1016.610 kb on - strand, within AO356_04490 at 1016.610 kb on - strand, within AO356_04490 at 1016.610 kb on - strand, within AO356_04490 at 1016.627 kb on + strand, within AO356_04490 at 1016.627 kb on + strand, within AO356_04490 at 1016.628 kb on - strand, within AO356_04490 at 1016.628 kb on - strand, within AO356_04490 at 1016.673 kb on + strand, within AO356_04490 at 1016.673 kb on + strand, within AO356_04490 at 1016.673 kb on + strand, within AO356_04490 at 1016.673 kb on + strand, within AO356_04490 at 1016.673 kb on + strand, within AO356_04490 at 1016.674 kb on - strand, within AO356_04490 at 1016.674 kb on - strand, within AO356_04490 at 1016.674 kb on - strand, within AO356_04490 at 1016.674 kb on - strand, within AO356_04490 at 1016.674 kb on - strand, within AO356_04490 at 1016.674 kb on - strand, within AO356_04490 at 1016.726 kb on + strand, within AO356_04490 at 1016.727 kb on - strand, within AO356_04490 at 1016.772 kb on + strand at 1016.772 kb on + strand at 1016.772 kb on + strand at 1016.772 kb on + strand at 1016.773 kb on - strand at 1016.773 kb on - strand at 1016.779 kb on - strand at 1016.945 kb on + strand at 1016.945 kb on + strand at 1016.946 kb on - strand at 1016.946 kb on - strand at 1016.950 kb on + strand at 1016.950 kb on + strand at 1016.950 kb on + strand at 1016.950 kb on + strand at 1016.950 kb on + strand at 1016.951 kb on - strand at 1016.951 kb on - strand at 1016.951 kb on - strand at 1016.951 kb on - strand at 1016.951 kb on - strand at 1016.951 kb on - strand at 1016.951 kb on - strand at 1016.951 kb on - strand at 1016.951 kb on - strand at 1016.951 kb on - strand at 1016.951 kb on - strand at 1016.954 kb on + strand at 1016.976 kb on + strand at 1016.976 kb on + strand at 1016.976 kb on + strand at 1016.976 kb on + strand at 1016.977 kb on - strand at 1016.977 kb on - strand at 1016.977 kb on - strand at 1016.977 kb on - strand at 1016.978 kb on + strand at 1016.979 kb on - strand at 1016.979 kb on - strand at 1016.979 kb on - strand at 1016.979 kb on - strand at 1016.987 kb on - strand at 1016.987 kb on - strand at 1017.072 kb on + strand at 1017.072 kb on + strand at 1017.072 kb on + strand at 1017.108 kb on + strand at 1017.108 kb on + strand at 1017.164 kb on + strand at 1017.164 kb on + strand at 1017.164 kb on + strand at 1017.164 kb on + strand at 1017.164 kb on + strand at 1017.164 kb on + strand at 1017.165 kb on - strand at 1017.165 kb on - strand at 1017.165 kb on - strand at 1017.166 kb on + strand at 1017.167 kb on - strand at 1017.185 kb on - strand at 1017.222 kb on + strand at 1017.222 kb on + strand at 1017.222 kb on + strand at 1017.222 kb on + strand at 1017.258 kb on + strand at 1017.258 kb on + strand at 1017.258 kb on + strand at 1017.259 kb on - strand at 1017.259 kb on - strand at 1017.259 kb on - strand at 1017.259 kb on - strand at 1017.259 kb on - strand at 1017.262 kb on + strand at 1017.262 kb on + strand at 1017.262 kb on + strand at 1017.262 kb on + strand at 1017.262 kb on + strand at 1017.262 kb on + strand at 1017.262 kb on + strand at 1017.262 kb on + strand at 1017.262 kb on + strand at 1017.263 kb on - strand at 1017.263 kb on - strand at 1017.263 kb on - strand at 1017.263 kb on - strand at 1017.263 kb on - strand at 1017.263 kb on - strand at 1017.263 kb on - strand at 1017.263 kb on - strand at 1017.274 kb on - strand at 1017.309 kb on + strand, within AO356_04495 at 1017.351 kb on + strand, within AO356_04495 at 1017.351 kb on + strand, within AO356_04495 at 1017.352 kb on - strand, within AO356_04495 at 1017.352 kb on - strand, within AO356_04495 at 1017.352 kb on - strand, within AO356_04495 at 1017.378 kb on - strand, within AO356_04495 at 1017.476 kb on + strand, within AO356_04495 at 1017.476 kb on + strand, within AO356_04495 at 1017.476 kb on + strand, within AO356_04495 at 1017.477 kb on - strand, within AO356_04495 at 1017.477 kb on - strand, within AO356_04495 at 1017.526 kb on + strand at 1017.526 kb on + strand at 1017.527 kb on - strand at 1017.527 kb on - strand at 1017.527 kb on - strand at 1017.537 kb on + strand at 1017.537 kb on + strand at 1017.537 kb on + strand at 1017.537 kb on + strand at 1017.544 kb on - strand at 1017.663 kb on + strand at 1017.677 kb on + strand at 1017.678 kb on - strand at 1017.678 kb on - strand at 1017.678 kb on - strand at 1017.678 kb on - strand at 1017.699 kb on + strand at 1017.699 kb on + strand at 1017.699 kb on + strand at 1017.699 kb on + strand at 1017.730 kb on + strand at 1017.730 kb on + strand at 1017.730 kb on + strand at 1017.730 kb on + strand at 1017.731 kb on - strand at 1017.731 kb on - strand at 1017.788 kb on + strand at 1017.854 kb on - strand, within AO356_04500 at 1017.874 kb on + strand, within AO356_04500 at 1017.874 kb on + strand, within AO356_04500 at 1017.875 kb on - strand, within AO356_04500 at 1017.917 kb on + strand, within AO356_04500 at 1017.917 kb on + strand, within AO356_04500 at 1017.917 kb on + strand, within AO356_04500 at 1017.917 kb on + strand, within AO356_04500 at 1017.918 kb on - strand, within AO356_04500 at 1017.918 kb on - strand, within AO356_04500 at 1017.918 kb on - strand, within AO356_04500 at 1017.918 kb on - strand, within AO356_04500 at 1017.979 kb on + strand, within AO356_04500 at 1017.979 kb on + strand, within AO356_04500 at 1017.979 kb on + strand, within AO356_04500 at 1017.980 kb on - strand, within AO356_04500 at 1017.980 kb on - strand, within AO356_04500 at 1017.980 kb on - strand, within AO356_04500 at 1017.980 kb on - strand, within AO356_04500 at 1017.980 kb on - strand, within AO356_04500 at 1017.980 kb on - strand, within AO356_04500 at 1017.983 kb on + strand, within AO356_04500 at 1017.984 kb on - strand, within AO356_04500 at 1018.040 kb on + strand, within AO356_04500 at 1018.040 kb on + strand, within AO356_04500 at 1018.041 kb on - strand, within AO356_04500 at 1018.041 kb on - strand, within AO356_04500 at 1018.070 kb on - strand, within AO356_04500 at 1018.070 kb on - strand, within AO356_04500 at 1018.180 kb on + strand at 1018.181 kb on - strand at 1018.181 kb on - strand at 1018.181 kb on - strand at 1018.215 kb on - strand at 1018.215 kb on - strand at 1018.234 kb on + strand at 1018.234 kb on + strand at 1018.234 kb on + strand at 1018.234 kb on + strand at 1018.234 kb on + strand at 1018.234 kb on + strand at 1018.235 kb on - strand at 1018.235 kb on - strand at 1018.235 kb on - strand at 1018.235 kb on - strand at 1018.235 kb on - strand at 1018.235 kb on - strand at 1018.315 kb on + strand at 1018.342 kb on + strand at 1018.342 kb on + strand at 1018.342 kb on + strand at 1018.342 kb on + strand at 1018.343 kb on - strand at 1018.343 kb on - strand at 1018.468 kb on - strand at 1018.515 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 1,016,266 - AO356_04490 0.60 +0.6 1,016,295 + AO356_04490 0.62 +0.1 1,016,295 + AO356_04490 0.62 +0.8 1,016,296 - AO356_04490 0.62 +0.6 1,016,296 - AO356_04490 0.62 +0.7 1,016,485 - AO356_04490 0.73 -0.8 1,016,503 + AO356_04490 0.74 +0.0 1,016,504 - AO356_04490 0.75 +0.3 1,016,504 - AO356_04490 0.75 +0.4 1,016,609 + AO356_04490 0.81 -0.1 1,016,610 - AO356_04490 0.81 +0.1 1,016,610 - AO356_04490 0.81 -1.1 1,016,610 - AO356_04490 0.81 -0.6 1,016,627 + AO356_04490 0.82 +0.7 1,016,627 + AO356_04490 0.82 -0.1 1,016,628 - AO356_04490 0.82 +0.7 1,016,628 - AO356_04490 0.82 -1.4 1,016,673 + AO356_04490 0.85 +0.4 1,016,673 + AO356_04490 0.85 -0.0 1,016,673 + AO356_04490 0.85 -0.5 1,016,673 + AO356_04490 0.85 -0.3 1,016,673 + AO356_04490 0.85 +0.3 1,016,674 - AO356_04490 0.85 +0.3 1,016,674 - AO356_04490 0.85 -1.1 1,016,674 - AO356_04490 0.85 +0.5 1,016,674 - AO356_04490 0.85 -0.4 1,016,674 - AO356_04490 0.85 +0.2 1,016,674 - AO356_04490 0.85 +0.4 1,016,726 + AO356_04490 0.88 +0.4 1,016,727 - AO356_04490 0.88 +0.5 1,016,772 + -0.0 1,016,772 + +0.5 1,016,772 + +0.0 1,016,772 + +0.3 1,016,773 - -1.3 1,016,773 - +0.2 1,016,779 - +0.4 1,016,945 + +1.0 1,016,945 + +0.6 1,016,946 - +0.8 1,016,946 - +0.4 1,016,950 + -0.2 1,016,950 + -0.1 1,016,950 + -0.8 1,016,950 + -0.7 1,016,950 + -0.2 1,016,951 - +1.1 1,016,951 - +0.6 1,016,951 - +0.3 1,016,951 - +0.0 1,016,951 - +0.5 1,016,951 - +0.7 1,016,951 - +0.5 1,016,951 - +0.9 1,016,951 - -0.9 1,016,951 - +0.3 1,016,951 - +0.2 1,016,954 + -0.7 1,016,976 + +0.5 1,016,976 + -0.8 1,016,976 + -1.3 1,016,976 + +0.7 1,016,977 - +0.3 1,016,977 - -0.9 1,016,977 - -0.7 1,016,977 - -0.4 1,016,978 + +0.6 1,016,979 - +0.1 1,016,979 - +0.4 1,016,979 - -0.2 1,016,979 - +0.6 1,016,987 - +0.3 1,016,987 - +0.1 1,017,072 + -0.3 1,017,072 + -0.3 1,017,072 + -0.1 1,017,108 + +0.1 1,017,108 + -0.8 1,017,164 + +0.2 1,017,164 + -1.8 1,017,164 + -0.2 1,017,164 + -0.6 1,017,164 + -0.1 1,017,164 + +0.2 1,017,165 - -0.4 1,017,165 - +0.3 1,017,165 - -0.5 1,017,166 + +0.4 1,017,167 - +0.0 1,017,185 - -0.4 1,017,222 + -0.0 1,017,222 + -0.0 1,017,222 + +0.3 1,017,222 + -0.2 1,017,258 + +0.6 1,017,258 + +0.2 1,017,258 + -0.4 1,017,259 - +0.3 1,017,259 - -0.4 1,017,259 - -0.1 1,017,259 - -0.3 1,017,259 - +1.0 1,017,262 + -0.1 1,017,262 + +0.1 1,017,262 + +0.3 1,017,262 + -1.6 1,017,262 + -0.2 1,017,262 + +1.0 1,017,262 + -0.2 1,017,262 + +0.4 1,017,262 + -0.1 1,017,263 - +0.4 1,017,263 - -0.6 1,017,263 - +0.2 1,017,263 - -0.4 1,017,263 - -0.0 1,017,263 - -1.1 1,017,263 - +0.4 1,017,263 - -0.5 1,017,274 - -0.4 1,017,309 + AO356_04495 0.20 -0.0 1,017,351 + AO356_04495 0.36 +0.1 1,017,351 + AO356_04495 0.36 -0.0 1,017,352 - AO356_04495 0.36 +0.6 1,017,352 - AO356_04495 0.36 -0.0 1,017,352 - AO356_04495 0.36 -0.1 1,017,378 - AO356_04495 0.45 -0.4 1,017,476 + AO356_04495 0.81 +1.0 1,017,476 + AO356_04495 0.81 -1.0 1,017,476 + AO356_04495 0.81 +0.2 1,017,477 - AO356_04495 0.81 -0.1 1,017,477 - AO356_04495 0.81 +0.0 1,017,526 + -0.2 1,017,526 + -1.4 1,017,527 - +0.4 1,017,527 - +0.2 1,017,527 - -0.4 1,017,537 + +0.1 1,017,537 + +0.4 1,017,537 + +0.6 1,017,537 + +0.3 1,017,544 - +0.5 1,017,663 + +0.3 1,017,677 + +0.0 1,017,678 - -0.4 1,017,678 - -0.4 1,017,678 - -0.1 1,017,678 - +2.6 1,017,699 + +0.2 1,017,699 + +0.5 1,017,699 + -0.4 1,017,699 + +0.6 1,017,730 + +0.5 1,017,730 + +0.2 1,017,730 + -0.0 1,017,730 + +0.0 1,017,731 - +0.7 1,017,731 - +1.3 1,017,788 + -0.8 1,017,854 - AO356_04500 0.18 -0.2 1,017,874 + AO356_04500 0.24 +0.0 1,017,874 + AO356_04500 0.24 -0.6 1,017,875 - AO356_04500 0.25 +0.5 1,017,917 + AO356_04500 0.38 -1.0 1,017,917 + AO356_04500 0.38 +0.2 1,017,917 + AO356_04500 0.38 -0.6 1,017,917 + AO356_04500 0.38 -0.8 1,017,918 - AO356_04500 0.39 +0.7 1,017,918 - AO356_04500 0.39 +1.1 1,017,918 - AO356_04500 0.39 +0.5 1,017,918 - AO356_04500 0.39 +0.7 1,017,979 + AO356_04500 0.58 +1.1 1,017,979 + AO356_04500 0.58 +0.1 1,017,979 + AO356_04500 0.58 -1.1 1,017,980 - AO356_04500 0.59 +0.6 1,017,980 - AO356_04500 0.59 -0.4 1,017,980 - AO356_04500 0.59 +0.7 1,017,980 - AO356_04500 0.59 -0.6 1,017,980 - AO356_04500 0.59 +0.2 1,017,980 - AO356_04500 0.59 -0.3 1,017,983 + AO356_04500 0.60 -0.3 1,017,984 - AO356_04500 0.60 +0.7 1,018,040 + AO356_04500 0.78 -0.3 1,018,040 + AO356_04500 0.78 -0.4 1,018,041 - AO356_04500 0.78 +0.5 1,018,041 - AO356_04500 0.78 +0.3 1,018,070 - AO356_04500 0.88 -0.2 1,018,070 - AO356_04500 0.88 -0.6 1,018,180 + +0.2 1,018,181 - +1.4 1,018,181 - +0.2 1,018,181 - -0.1 1,018,215 - +0.2 1,018,215 - +0.6 1,018,234 + -1.0 1,018,234 + -0.6 1,018,234 + +1.7 1,018,234 + -1.3 1,018,234 + -0.8 1,018,234 + +0.2 1,018,235 - -0.1 1,018,235 - -0.3 1,018,235 - +0.6 1,018,235 - -0.4 1,018,235 - +0.2 1,018,235 - +0.2 1,018,315 + -0.1 1,018,342 + -0.9 1,018,342 + -0.0 1,018,342 + +0.3 1,018,342 + +0.1 1,018,343 - +0.4 1,018,343 - -0.4 1,018,468 - -0.3 1,018,515 + +0.5
Or see this region's nucleotide sequence