Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3639

Experiment: epiphytic; Green bean

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	epiphytic; Green bean
4,320,519	-		Psyr_3638	0.46	-0.7
4,320,666	+		Psyr_3638	0.61	+0.3
4,320,666	+		Psyr_3638	0.61	+0.5
4,320,666	+		Psyr_3638	0.61	+1.9
4,320,666	+		Psyr_3638	0.61	-0.3
4,320,666	+		Psyr_3638	0.61	-0.8
4,320,667	-		Psyr_3638	0.61	-0.2
4,320,696	+		Psyr_3638	0.64	+1.3
4,320,773	+		Psyr_3638	0.72	+1.3
4,320,929	+		Psyr_3638	0.88	-1.7
4,320,929	+		Psyr_3638	0.88	-0.7
4,320,929	+		Psyr_3638	0.88	-1.0
4,320,929	+		Psyr_3638	0.88	-0.0
4,320,930	-		Psyr_3638	0.88	-0.3
4,320,930	-		Psyr_3638	0.88	-2.6
4,321,021	+				-1.7
4,321,079	+				+1.1
4,321,079	+				-2.5
4,321,080	-				+0.8
4,321,090	+				-2.0
4,321,112	+				-1.3
4,321,129	-				-0.8
4,321,131	-				-0.6
4,321,175	+				-0.8
4,321,230	+				-2.0
4,321,230	+				-0.6
4,321,230	+				+0.4
4,321,230	+				+1.4
4,321,231	-				+0.9
4,321,231	-				+2.0
4,321,231	-				+0.2
4,321,231	-				-0.3
4,321,231	-				-0.3
4,321,290	+				+1.9
4,321,291	-				-1.4
4,321,295	-				+0.2
4,321,307	-				+0.8
4,321,451	+		Psyr_3639	0.14	-0.3
4,321,451	+		Psyr_3639	0.14	-0.9
4,321,452	-		Psyr_3639	0.14	+0.5
4,321,452	-		Psyr_3639	0.14	+1.9
4,321,452	-		Psyr_3639	0.14	+0.3
4,321,478	+		Psyr_3639	0.16	-1.3
4,321,478	+		Psyr_3639	0.16	-1.3
4,321,478	+		Psyr_3639	0.16	+0.6
4,321,478	+		Psyr_3639	0.16	-1.5
4,321,478	+		Psyr_3639	0.16	+1.0
4,321,478	+		Psyr_3639	0.16	-0.0
4,321,478	+		Psyr_3639	0.16	-0.5
4,321,478	+		Psyr_3639	0.16	-1.0
4,321,479	-		Psyr_3639	0.16	-1.9
4,321,479	-		Psyr_3639	0.16	+0.7
4,321,479	-		Psyr_3639	0.16	+0.1
4,321,479	-		Psyr_3639	0.16	-0.2
4,321,479	-		Psyr_3639	0.16	+2.7
4,321,479	-		Psyr_3639	0.16	+3.4
4,321,479	-		Psyr_3639	0.16	-0.2
4,321,482	+		Psyr_3639	0.16	+1.5
4,321,482	+		Psyr_3639	0.16	+1.2
4,321,483	-		Psyr_3639	0.16	-2.0
4,321,550	+		Psyr_3639	0.21	+0.3
4,321,551	-		Psyr_3639	0.21	-0.5
4,321,551	-		Psyr_3639	0.21	-0.0
4,321,551	-		Psyr_3639	0.21	+1.2
4,321,558	+		Psyr_3639	0.21	-0.4
4,321,558	+		Psyr_3639	0.21	+0.7
4,321,558	+		Psyr_3639	0.21	+0.7
4,321,558	+		Psyr_3639	0.21	-2.6
4,321,559	-		Psyr_3639	0.21	-0.3
4,321,559	-		Psyr_3639	0.21	-1.0
4,321,559	-		Psyr_3639	0.21	+0.8
4,321,559	-		Psyr_3639	0.21	+0.6
4,321,559	-		Psyr_3639	0.21	+1.3
4,321,590	+		Psyr_3639	0.24	-0.2
4,321,590	+		Psyr_3639	0.24	+1.1
4,321,590	+		Psyr_3639	0.24	-0.2
4,321,591	-		Psyr_3639	0.24	+1.7
4,321,618	+		Psyr_3639	0.26	-1.5
4,321,618	+		Psyr_3639	0.26	-0.3
4,321,618	+		Psyr_3639	0.26	+0.5
4,321,618	+		Psyr_3639	0.26	+0.3
4,321,619	-		Psyr_3639	0.26	+1.1
4,321,619	-		Psyr_3639	0.26	-0.4
4,321,619	-		Psyr_3639	0.26	-1.1
4,321,665	+		Psyr_3639	0.29	-0.7
4,321,665	+		Psyr_3639	0.29	+0.7
4,321,665	+		Psyr_3639	0.29	-0.7
4,321,666	-		Psyr_3639	0.29	+0.1
4,321,666	-		Psyr_3639	0.29	-1.1
4,321,666	-		Psyr_3639	0.29	-0.4
4,321,666	-		Psyr_3639	0.29	-0.6
4,321,666	-		Psyr_3639	0.29	-2.3
4,321,666	-		Psyr_3639	0.29	+0.1
4,321,697	-		Psyr_3639	0.31	+0.3
4,321,697	-		Psyr_3639	0.31	-0.5
4,321,773	+		Psyr_3639	0.36	+2.0
4,321,774	-		Psyr_3639	0.36	+0.3
4,321,791	+		Psyr_3639	0.37	-2.6
4,321,792	-		Psyr_3639	0.38	+0.4
4,321,792	-		Psyr_3639	0.38	+0.4
4,321,862	+		Psyr_3639	0.42	-0.1
4,321,862	+		Psyr_3639	0.42	+0.6
4,321,863	-		Psyr_3639	0.42	-0.3
4,321,928	+		Psyr_3639	0.47	+0.2
4,321,928	+		Psyr_3639	0.47	-1.7
4,321,928	+		Psyr_3639	0.47	+2.0
4,321,928	+		Psyr_3639	0.47	-2.5
4,321,928	+		Psyr_3639	0.47	+0.3
4,321,928	+		Psyr_3639	0.47	+1.3
4,321,928	+		Psyr_3639	0.47	+0.3
4,321,928	+		Psyr_3639	0.47	+1.8
4,321,928	+		Psyr_3639	0.47	-0.1
4,321,929	-		Psyr_3639	0.47	-0.8
4,321,929	-		Psyr_3639	0.47	+2.4
4,321,929	-		Psyr_3639	0.47	+1.1
4,321,945	-		Psyr_3639	0.48	-1.0
4,322,018	+		Psyr_3639	0.53	+0.7
4,322,018	+		Psyr_3639	0.53	-0.0
4,322,018	+		Psyr_3639	0.53	-3.2
4,322,019	-		Psyr_3639	0.53	-1.5
4,322,019	-		Psyr_3639	0.53	+0.8
4,322,019	-		Psyr_3639	0.53	-0.7
4,322,019	-		Psyr_3639	0.53	-0.3
4,322,019	-		Psyr_3639	0.53	-0.3
4,322,065	+		Psyr_3639	0.56	+1.7
4,322,065	+		Psyr_3639	0.56	-0.9
4,322,066	-		Psyr_3639	0.57	+1.4
4,322,076	+		Psyr_3639	0.57	+1.2
4,322,076	+		Psyr_3639	0.57	+0.5
4,322,076	+		Psyr_3639	0.57	+0.4
4,322,076	+		Psyr_3639	0.57	+1.4
4,322,077	-		Psyr_3639	0.57	-0.0
4,322,140	+		Psyr_3639	0.62	-0.0
4,322,140	+		Psyr_3639	0.62	+1.2
4,322,140	+		Psyr_3639	0.62	-0.9
4,322,140	+		Psyr_3639	0.62	-0.3
4,322,216	+		Psyr_3639	0.67	-0.5
4,322,216	+		Psyr_3639	0.67	-2.0
4,322,216	+		Psyr_3639	0.67	-1.5
4,322,216	+		Psyr_3639	0.67	+0.2
4,322,216	+		Psyr_3639	0.67	-1.1
4,322,216	+		Psyr_3639	0.67	+0.3
4,322,216	+		Psyr_3639	0.67	-1.2
4,322,216	+		Psyr_3639	0.67	-0.3
4,322,216	+		Psyr_3639	0.67	+0.7
4,322,216	+		Psyr_3639	0.67	-0.1
4,322,216	+		Psyr_3639	0.67	-1.1
4,322,216	+		Psyr_3639	0.67	+0.9
4,322,216	+		Psyr_3639	0.67	+0.4
4,322,216	+		Psyr_3639	0.67	+0.7
4,322,216	+		Psyr_3639	0.67	-0.1
4,322,216	+		Psyr_3639	0.67	-2.2
4,322,216	+		Psyr_3639	0.67	-1.4
4,322,216	+		Psyr_3639	0.67	+0.0
4,322,216	+		Psyr_3639	0.67	+0.5
4,322,216	+		Psyr_3639	0.67	-1.5
4,322,216	+		Psyr_3639	0.67	+1.5
4,322,216	+		Psyr_3639	0.67	+0.5
4,322,216	+		Psyr_3639	0.67	-0.4
4,322,216	+		Psyr_3639	0.67	-1.7
4,322,216	+		Psyr_3639	0.67	+0.4
4,322,216	+		Psyr_3639	0.67	+1.0
4,322,216	+		Psyr_3639	0.67	+0.0
4,322,216	+		Psyr_3639	0.67	-0.8
4,322,216	+		Psyr_3639	0.67	-1.5
4,322,216	+		Psyr_3639	0.67	-0.0
4,322,217	-		Psyr_3639	0.67	+0.1
4,322,217	-		Psyr_3639	0.67	-0.7
4,322,217	-		Psyr_3639	0.67	+0.5
4,322,217	-		Psyr_3639	0.67	+1.1
4,322,217	-		Psyr_3639	0.67	-1.3
4,322,217	-		Psyr_3639	0.67	-0.3
4,322,217	-		Psyr_3639	0.67	-0.5
4,322,217	-		Psyr_3639	0.67	-1.5
4,322,217	-		Psyr_3639	0.67	-2.7
4,322,217	-		Psyr_3639	0.67	-0.6
4,322,217	-		Psyr_3639	0.67	+1.3
4,322,217	-		Psyr_3639	0.67	+0.5
4,322,217	-		Psyr_3639	0.67	-0.5
4,322,217	-		Psyr_3639	0.67	+1.3
4,322,217	-		Psyr_3639	0.67	+1.2
4,322,218	+		Psyr_3639	0.67	+0.1
4,322,218	+		Psyr_3639	0.67	-1.3
4,322,219	-		Psyr_3639	0.67	+0.2
4,322,219	-		Psyr_3639	0.67	-0.7
4,322,219	-		Psyr_3639	0.67	-0.5
4,322,220	+		Psyr_3639	0.67	-0.2
4,322,220	+		Psyr_3639	0.67	-0.1
4,322,220	+		Psyr_3639	0.67	+1.5
4,322,220	+		Psyr_3639	0.67	-0.6
4,322,221	-		Psyr_3639	0.67	-1.0
4,322,221	-		Psyr_3639	0.67	-0.8
4,322,234	+		Psyr_3639	0.68	+0.1
4,322,234	+		Psyr_3639	0.68	-2.0
4,322,235	-		Psyr_3639	0.68	+0.2
4,322,235	-		Psyr_3639	0.68	+0.5
4,322,235	-		Psyr_3639	0.68	+0.1
4,322,235	-		Psyr_3639	0.68	-0.1
4,322,235	-		Psyr_3639	0.68	+0.9
4,322,235	-		Psyr_3639	0.68	-3.5
4,322,235	-		Psyr_3639	0.68	-0.2
4,322,235	-		Psyr_3639	0.68	-0.5
4,322,235	-		Psyr_3639	0.68	-1.3
4,322,235	-		Psyr_3639	0.68	+1.1
4,322,501	+		Psyr_3639	0.87	-1.0
4,322,501	+		Psyr_3639	0.87	+1.1
4,322,501	+		Psyr_3639	0.87	-1.3
4,322,501	+		Psyr_3639	0.87	+5.1
4,322,501	+		Psyr_3639	0.87	+1.3
4,322,501	+		Psyr_3639	0.87	+1.3
4,322,501	+		Psyr_3639	0.87	+0.4
4,322,501	+		Psyr_3639	0.87	+5.8
4,322,501	+		Psyr_3639	0.87	-1.6
4,322,501	+		Psyr_3639	0.87	-1.2
4,322,501	+		Psyr_3639	0.87	-1.5
4,322,501	+		Psyr_3639	0.87	-3.2
4,322,501	+		Psyr_3639	0.87	-1.9
4,322,501	+		Psyr_3639	0.87	-0.9
4,322,501	+		Psyr_3639	0.87	-0.9
4,322,501	+		Psyr_3639	0.87	-2.3
4,322,501	+		Psyr_3639	0.87	+0.7
4,322,501	+		Psyr_3639	0.87	+0.6
4,322,502	-		Psyr_3639	0.87	+1.0
4,322,502	-		Psyr_3639	0.87	-0.4
4,322,502	-		Psyr_3639	0.87	-1.2
4,322,502	-		Psyr_3639	0.87	-0.5
4,322,502	-		Psyr_3639	0.87	+3.9
4,322,502	-		Psyr_3639	0.87	+4.2
4,322,502	-		Psyr_3639	0.87	-1.3
4,322,502	-		Psyr_3639	0.87	+2.4
4,322,502	-		Psyr_3639	0.87	+0.0
4,322,502	-		Psyr_3639	0.87	+0.0
4,322,502	-		Psyr_3639	0.87	-1.2
4,322,502	-		Psyr_3639	0.87	+1.2
4,322,653	+				-1.8
4,322,654	-				-1.3
4,322,726	-				-2.2
4,322,757	+				+0.0
4,322,757	+				-1.0
4,322,757	+				-0.7
4,322,758	-				+0.7
4,322,827	+				+0.1
4,322,843	+				-0.5
4,322,847	+				-0.9
4,322,847	+				-0.9
4,322,848	-				-0.3
4,322,848	-				-1.0
4,322,848	-				-0.6
4,322,848	-				-0.0
4,322,902	-				-0.6
4,322,917	+				-0.2
4,322,926	+				+0.5
4,322,927	-				-1.9
4,322,929	-				-0.2
4,322,953	+				+0.1
4,322,954	-				+0.1
4,322,954	-				+1.1
4,322,954	-				+1.4
4,323,279	+		Psyr_3640	0.70	-1.2
4,323,279	+		Psyr_3640	0.70	-0.9
4,323,279	+		Psyr_3640	0.70	+1.9
4,323,280	-		Psyr_3640	0.71	-1.3
4,323,280	-		Psyr_3640	0.71	-0.8
4,323,280	-		Psyr_3640	0.71	+2.0
4,323,344	+				+0.5
4,323,344	+				-1.0
4,323,344	+				+0.2
4,323,345	-				-1.9
4,323,345	-				+0.2
4,323,376	+				-1.6