Strain Fitness in Rahnella sp. WP5 around EX31_RS26025

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
8,769	-				+0.6
8,773	-				-0.7
8,782	+				+1.9
8,782	+				+1.3
8,783	-				+0.8
8,965	+		EX31_RS16300	0.60	-0.5
8,965	+		EX31_RS16300	0.60	+1.3
8,966	-		EX31_RS16300	0.60	-0.4
8,966	-		EX31_RS16300	0.60	-0.1
8,966	-		EX31_RS16300	0.60	+0.5
8,966	-		EX31_RS16300	0.60	+0.8
8,994	+		EX31_RS16300	0.70	+0.1
8,994	+		EX31_RS16300	0.70	+1.1
8,995	-		EX31_RS16300	0.70	-1.1
8,995	-		EX31_RS16300	0.70	+0.3
9,012	-		EX31_RS16300	0.76	+0.5
9,012	-		EX31_RS16300	0.76	-1.5
9,083	+				+1.8
9,083	+				+2.3
9,143	+				+0.1
9,143	+				+1.8
9,143	+				-0.5
9,143	+				-0.5
9,143	+				-1.0
9,143	+				+0.8
9,144	-				+0.5
9,144	-				+0.3
9,144	-				-2.1
9,144	-				+0.3
9,144	-				+0.1
9,144	-				+0.3
9,294	+		EX31_RS16305	0.26	-0.8
9,294	+		EX31_RS16305	0.26	-0.2
9,294	+		EX31_RS16305	0.26	+0.7
9,294	+		EX31_RS16305	0.26	-0.8
9,295	-		EX31_RS16305	0.26	+0.6
9,295	-		EX31_RS16305	0.26	+0.8
9,295	-		EX31_RS16305	0.26	+0.3
9,370	+		EX31_RS16305	0.39	+0.8
9,370	+		EX31_RS16305	0.39	+1.3
9,371	-		EX31_RS16305	0.39	+1.8
9,371	-		EX31_RS16305	0.39	+1.1
9,371	-		EX31_RS16305	0.39	+1.0
9,375	+		EX31_RS16305	0.40	-2.0
9,375	+		EX31_RS16305	0.40	+0.0
9,376	-		EX31_RS16305	0.40	+0.3
9,488	+		EX31_RS16305	0.58	-0.1
9,488	+		EX31_RS16305	0.58	+1.3
9,488	+		EX31_RS16305	0.58	+0.9
9,488	+		EX31_RS16305	0.58	+0.3
9,489	-		EX31_RS16305	0.59	+0.0
9,489	-		EX31_RS16305	0.59	+1.5
9,612	+		EX31_RS16305	0.79	+1.3
9,613	-		EX31_RS16305	0.79	-0.1
9,613	-		EX31_RS16305	0.79	+0.2
9,613	-		EX31_RS16305	0.79	-0.2
9,613	-		EX31_RS16305	0.79	+1.3
9,613	-		EX31_RS16305	0.79	+1.8
9,631	+		EX31_RS16305	0.82	+0.0
9,631	+		EX31_RS16305	0.82	+0.7
9,632	-		EX31_RS16305	0.82	+0.3
9,656	+		EX31_RS16305	0.86	-0.2
9,656	+		EX31_RS16305	0.86	+1.3
9,656	+		EX31_RS16305	0.86	-0.2
9,656	+		EX31_RS16305	0.86	-0.7
9,657	-		EX31_RS16305	0.87	+0.9
9,657	-		EX31_RS16305	0.87	+0.8
9,657	-		EX31_RS16305	0.87	+0.6
9,657	-		EX31_RS16305	0.87	+0.0
9,829	+		EX31_RS26025	0.75	+1.3
9,829	+		EX31_RS26025	0.75	-0.7
9,830	-		EX31_RS26025	0.76	-1.0
9,830	-		EX31_RS26025	0.76	+0.3
9,886	+				+0.0
9,886	+				+0.0
9,886	+				+0.3
9,887	-				+0.4
9,928	+				-0.9
9,928	+				-1.5
9,929	-				+0.3
9,929	-				-1.4
9,929	-				-0.5
9,939	+				+0.3
9,939	+				+0.6
9,939	+				-0.7
9,940	-				+0.9
9,940	-				-1.4
9,940	-				+1.3
10,012	+		EX31_RS16310	0.14	+0.3
10,012	+		EX31_RS16310	0.14	-0.7
10,012	+		EX31_RS16310	0.14	+0.3
10,012	+		EX31_RS16310	0.14	-0.8
10,012	+		EX31_RS16310	0.14	+0.3
10,012	+		EX31_RS16310	0.14	-2.4
10,012	+		EX31_RS16310	0.14	-1.4
10,012	+		EX31_RS16310	0.14	-0.4
10,012	+		EX31_RS16310	0.14	+0.2
10,012	+		EX31_RS16310	0.14	-0.6
10,012	+		EX31_RS16310	0.14	-1.2
10,013	-		EX31_RS16310	0.14	+0.9
10,013	-		EX31_RS16310	0.14	+0.1
10,013	-		EX31_RS16310	0.14	+0.3
10,013	-		EX31_RS16310	0.14	+0.3
10,013	-		EX31_RS16310	0.14	-0.5
10,054	-		EX31_RS16310	0.18	+0.8
10,056	+		EX31_RS16310	0.18	+0.7
10,056	+		EX31_RS16310	0.18	+0.8
10,057	-		EX31_RS16310	0.18	+1.2
10,057	-		EX31_RS16310	0.18	+1.3
10,057	-		EX31_RS16310	0.18	-0.3
10,057	-		EX31_RS16310	0.18	+0.2
10,068	+		EX31_RS16310	0.19	-0.2
10,068	+		EX31_RS16310	0.19	+0.7
10,068	+		EX31_RS16310	0.19	+1.6
10,069	-		EX31_RS16310	0.19	-1.0
10,069	-		EX31_RS16310	0.19	-1.0
10,083	+		EX31_RS16310	0.20	-0.2
10,084	-		EX31_RS16310	0.20	+0.9
10,113	+		EX31_RS16310	0.23	-0.7
10,114	-		EX31_RS16310	0.23	+0.5
10,161	+		EX31_RS16310	0.27	-0.1
10,162	-		EX31_RS16310	0.27	-0.8
10,162	-		EX31_RS16310	0.27	-0.7
10,162	-		EX31_RS16310	0.27	-0.7
10,210	+		EX31_RS16310	0.32	-1.1
10,210	+		EX31_RS16310	0.32	+0.9
10,210	+		EX31_RS16310	0.32	+1.9
10,211	-		EX31_RS16310	0.32	+0.3
10,252	-		EX31_RS16310	0.35	+0.3
10,264	+		EX31_RS16310	0.36	+0.8
10,264	+		EX31_RS16310	0.36	+1.3
10,439	+		EX31_RS16310	0.52	-0.5
10,439	+		EX31_RS16310	0.52	-0.8
10,439	+		EX31_RS16310	0.52	-0.2
10,439	+		EX31_RS16310	0.52	-1.0
10,439	+		EX31_RS16310	0.52	+0.6
10,440	-		EX31_RS16310	0.52	+0.3
10,440	-		EX31_RS16310	0.52	+0.3
10,440	-		EX31_RS16310	0.52	+0.6
10,440	-		EX31_RS16310	0.52	+0.1
10,460	+		EX31_RS16310	0.54	-0.2
10,460	+		EX31_RS16310	0.54	-0.2
10,460	+		EX31_RS16310	0.54	+1.8
10,461	-		EX31_RS16310	0.54	-1.0
10,461	-		EX31_RS16310	0.54	-1.8
10,587	+		EX31_RS16310	0.65	+2.1
10,588	-		EX31_RS16310	0.65	+0.7
10,606	-		EX31_RS16310	0.67	+1.1
10,648	+		EX31_RS16310	0.71	-0.1
10,650	+		EX31_RS16310	0.71	+0.7
10,650	+		EX31_RS16310	0.71	+1.5
10,650	+		EX31_RS16310	0.71	+1.3
10,650	+		EX31_RS16310	0.71	-0.2
10,650	+		EX31_RS16310	0.71	-0.1
10,650	+		EX31_RS16310	0.71	-1.0
10,651	-		EX31_RS16310	0.71	-1.7
10,651	-		EX31_RS16310	0.71	-0.7
10,651	-		EX31_RS16310	0.71	+0.1
10,651	-		EX31_RS16310	0.71	+1.9
10,722	+		EX31_RS16310	0.78	+0.3
10,747	-		EX31_RS16310	0.80	+0.9
10,854	+		EX31_RS16310	0.89	-1.2
10,854	+		EX31_RS16310	0.89	-1.4
10,854	+		EX31_RS16310	0.89	+2.9
10,854	+		EX31_RS16310	0.89	+1.3
10,854	+		EX31_RS16310	0.89	-0.7
10,854	+		EX31_RS16310	0.89	+1.9
10,854	+		EX31_RS16310	0.89	-1.4
10,854	+		EX31_RS16310	0.89	+0.3
10,855	-		EX31_RS16310	0.89	+0.2
10,855	-		EX31_RS16310	0.89	+0.6
10,855	-		EX31_RS16310	0.89	+1.3
10,855	-		EX31_RS16310	0.89	+1.3
10,855	-		EX31_RS16310	0.89	+1.6