Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS24015 and EX31_RS24020 are separated by 11 nucleotides EX31_RS24020 and EX31_RS24025 are separated by 320 nucleotides
EX31_RS24015: EX31_RS24015 - ABC transporter permease, at 570,291 to 571,286
_RS24015
EX31_RS24020: EX31_RS24020 - ATP-binding cassette domain-containing protein, at 571,298 to 572,779
_RS24020
EX31_RS24025: EX31_RS24025 - VOC family protein, at 573,100 to 573,960
_RS24025
Position (kb) 571
572
573 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 570.305 kb on + strand at 570.305 kb on + strand at 570.305 kb on + strand at 570.306 kb on - strand at 570.306 kb on - strand at 570.307 kb on + strand at 570.307 kb on + strand at 570.307 kb on + strand at 570.307 kb on + strand at 570.307 kb on + strand at 570.307 kb on + strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.337 kb on - strand at 570.361 kb on + strand at 570.361 kb on + strand at 570.362 kb on - strand at 570.364 kb on + strand at 570.365 kb on - strand at 570.440 kb on + strand, within EX31_RS24015 at 570.441 kb on - strand, within EX31_RS24015 at 570.441 kb on - strand, within EX31_RS24015 at 570.474 kb on - strand, within EX31_RS24015 at 570.476 kb on - strand, within EX31_RS24015 at 570.589 kb on + strand, within EX31_RS24015 at 570.590 kb on - strand, within EX31_RS24015 at 570.590 kb on - strand, within EX31_RS24015 at 570.661 kb on + strand, within EX31_RS24015 at 570.662 kb on - strand, within EX31_RS24015 at 570.662 kb on - strand, within EX31_RS24015 at 570.662 kb on - strand, within EX31_RS24015 at 570.662 kb on - strand, within EX31_RS24015 at 570.662 kb on - strand, within EX31_RS24015 at 570.662 kb on - strand, within EX31_RS24015 at 570.662 kb on - strand, within EX31_RS24015 at 570.662 kb on - strand, within EX31_RS24015 at 570.693 kb on - strand, within EX31_RS24015 at 570.693 kb on - strand, within EX31_RS24015 at 570.693 kb on - strand, within EX31_RS24015 at 570.807 kb on + strand, within EX31_RS24015 at 570.808 kb on - strand, within EX31_RS24015 at 570.808 kb on - strand, within EX31_RS24015 at 570.836 kb on - strand, within EX31_RS24015 at 570.841 kb on + strand, within EX31_RS24015 at 570.841 kb on + strand, within EX31_RS24015 at 570.841 kb on + strand, within EX31_RS24015 at 570.841 kb on + strand, within EX31_RS24015 at 570.842 kb on - strand, within EX31_RS24015 at 570.842 kb on - strand, within EX31_RS24015 at 570.842 kb on - strand, within EX31_RS24015 at 570.842 kb on - strand, within EX31_RS24015 at 570.842 kb on - strand, within EX31_RS24015 at 570.842 kb on - strand, within EX31_RS24015 at 570.842 kb on - strand, within EX31_RS24015 at 570.842 kb on - strand, within EX31_RS24015 at 570.842 kb on - strand, within EX31_RS24015 at 570.947 kb on + strand, within EX31_RS24015 at 570.965 kb on + strand, within EX31_RS24015 at 570.965 kb on + strand, within EX31_RS24015 at 570.966 kb on - strand, within EX31_RS24015 at 571.053 kb on + strand, within EX31_RS24015 at 571.160 kb on + strand, within EX31_RS24015 at 571.161 kb on - strand, within EX31_RS24015 at 571.220 kb on + strand at 571.220 kb on + strand at 571.220 kb on + strand at 571.221 kb on - strand at 571.221 kb on - strand at 571.221 kb on - strand at 571.221 kb on - strand at 571.324 kb on - strand at 571.324 kb on - strand at 571.324 kb on - strand at 571.328 kb on + strand at 571.328 kb on + strand at 571.329 kb on - strand at 571.329 kb on - strand at 571.329 kb on - strand at 571.331 kb on + strand at 571.332 kb on - strand at 571.389 kb on - strand at 571.389 kb on - strand at 571.443 kb on + strand at 571.443 kb on + strand at 571.443 kb on + strand at 571.443 kb on + strand at 571.444 kb on - strand at 571.444 kb on - strand at 571.447 kb on + strand, within EX31_RS24020 at 571.448 kb on - strand, within EX31_RS24020 at 571.646 kb on + strand, within EX31_RS24020 at 571.647 kb on - strand, within EX31_RS24020 at 571.657 kb on + strand, within EX31_RS24020 at 571.796 kb on + strand, within EX31_RS24020 at 571.796 kb on + strand, within EX31_RS24020 at 571.796 kb on + strand, within EX31_RS24020 at 571.796 kb on + strand, within EX31_RS24020 at 571.797 kb on - strand, within EX31_RS24020 at 571.872 kb on - strand, within EX31_RS24020 at 571.970 kb on + strand, within EX31_RS24020 at 571.970 kb on + strand, within EX31_RS24020 at 572.018 kb on + strand, within EX31_RS24020 at 572.062 kb on + strand, within EX31_RS24020 at 572.063 kb on - strand, within EX31_RS24020 at 572.164 kb on + strand, within EX31_RS24020 at 572.165 kb on - strand, within EX31_RS24020 at 572.165 kb on - strand, within EX31_RS24020 at 572.206 kb on + strand, within EX31_RS24020 at 572.206 kb on + strand, within EX31_RS24020 at 572.207 kb on - strand, within EX31_RS24020 at 572.210 kb on + strand, within EX31_RS24020 at 572.210 kb on + strand, within EX31_RS24020 at 572.210 kb on + strand, within EX31_RS24020 at 572.210 kb on + strand, within EX31_RS24020 at 572.210 kb on + strand, within EX31_RS24020 at 572.211 kb on - strand, within EX31_RS24020 at 572.320 kb on + strand, within EX31_RS24020 at 572.320 kb on + strand, within EX31_RS24020 at 572.321 kb on - strand, within EX31_RS24020 at 572.321 kb on - strand, within EX31_RS24020 at 572.455 kb on + strand, within EX31_RS24020 at 572.456 kb on - strand, within EX31_RS24020 at 572.456 kb on - strand, within EX31_RS24020 at 572.456 kb on - strand, within EX31_RS24020 at 572.456 kb on - strand, within EX31_RS24020 at 572.557 kb on + strand, within EX31_RS24020 at 572.590 kb on + strand, within EX31_RS24020 at 572.629 kb on - strand, within EX31_RS24020 at 572.693 kb on + strand at 572.694 kb on - strand at 572.770 kb on + strand at 572.770 kb on + strand at 572.770 kb on + strand at 572.770 kb on + strand at 572.770 kb on + strand at 572.771 kb on - strand at 572.771 kb on - strand at 572.773 kb on + strand at 572.773 kb on + strand at 572.774 kb on - strand at 572.815 kb on + strand at 572.815 kb on + strand at 572.815 kb on + strand at 572.818 kb on + strand at 572.818 kb on + strand at 572.819 kb on - strand at 572.819 kb on - strand at 572.819 kb on - strand at 572.867 kb on - strand at 572.877 kb on + strand at 572.878 kb on - strand at 572.878 kb on - strand at 572.882 kb on + strand at 572.883 kb on - strand at 572.894 kb on + strand at 572.894 kb on + strand at 572.895 kb on - strand at 572.895 kb on - strand at 572.907 kb on - strand at 572.915 kb on + strand at 572.916 kb on - strand at 572.919 kb on + strand at 572.919 kb on + strand at 572.919 kb on + strand at 572.919 kb on + strand at 572.920 kb on - strand at 572.920 kb on - strand at 572.920 kb on - strand at 572.920 kb on - strand at 572.935 kb on + strand at 573.052 kb on - strand at 573.052 kb on - strand at 573.052 kb on - strand at 573.052 kb on - strand at 573.181 kb on + strand at 573.181 kb on + strand at 573.182 kb on - strand at 573.182 kb on - strand at 573.182 kb on - strand at 573.398 kb on + strand, within EX31_RS24025 at 573.399 kb on - strand, within EX31_RS24025 at 573.400 kb on + strand, within EX31_RS24025 at 573.400 kb on + strand, within EX31_RS24025 at 573.400 kb on + strand, within EX31_RS24025 at 573.401 kb on - strand, within EX31_RS24025 at 573.401 kb on - strand, within EX31_RS24025 at 573.401 kb on - strand, within EX31_RS24025 at 573.401 kb on - strand, within EX31_RS24025 at 573.401 kb on - strand, within EX31_RS24025 at 573.668 kb on + strand, within EX31_RS24025 at 573.669 kb on - strand, within EX31_RS24025
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 570,305 + +0.8 570,305 + +0.0 570,305 + +0.1 570,306 - -0.4 570,306 - +0.4 570,307 + +0.2 570,307 + +0.4 570,307 + -0.6 570,307 + -0.6 570,307 + +0.8 570,307 + -0.3 570,308 - -1.0 570,308 - -1.0 570,308 - +0.9 570,308 - +0.3 570,308 - +0.8 570,308 - +0.3 570,308 - +1.8 570,308 - +0.2 570,308 - -2.2 570,308 - +1.2 570,308 - -1.8 570,308 - +1.0 570,308 - +1.3 570,308 - +2.3 570,337 - -1.6 570,361 + -0.8 570,361 + +0.6 570,362 - -1.3 570,364 + -1.2 570,365 - +0.8 570,440 + EX31_RS24015 0.15 -0.8 570,441 - EX31_RS24015 0.15 -0.4 570,441 - EX31_RS24015 0.15 -1.0 570,474 - EX31_RS24015 0.18 -0.9 570,476 - EX31_RS24015 0.19 +0.4 570,589 + EX31_RS24015 0.30 -1.0 570,590 - EX31_RS24015 0.30 -2.6 570,590 - EX31_RS24015 0.30 -0.2 570,661 + EX31_RS24015 0.37 +0.2 570,662 - EX31_RS24015 0.37 -1.0 570,662 - EX31_RS24015 0.37 +0.1 570,662 - EX31_RS24015 0.37 +0.8 570,662 - EX31_RS24015 0.37 +0.4 570,662 - EX31_RS24015 0.37 -0.6 570,662 - EX31_RS24015 0.37 +0.0 570,662 - EX31_RS24015 0.37 +0.4 570,662 - EX31_RS24015 0.37 -0.7 570,693 - EX31_RS24015 0.40 -0.0 570,693 - EX31_RS24015 0.40 +1.1 570,693 - EX31_RS24015 0.40 -2.2 570,807 + EX31_RS24015 0.52 +2.8 570,808 - EX31_RS24015 0.52 -1.3 570,808 - EX31_RS24015 0.52 +0.1 570,836 - EX31_RS24015 0.55 +0.2 570,841 + EX31_RS24015 0.55 +2.8 570,841 + EX31_RS24015 0.55 -1.6 570,841 + EX31_RS24015 0.55 +1.3 570,841 + EX31_RS24015 0.55 +0.8 570,842 - EX31_RS24015 0.55 -0.3 570,842 - EX31_RS24015 0.55 +0.8 570,842 - EX31_RS24015 0.55 +1.3 570,842 - EX31_RS24015 0.55 +0.5 570,842 - EX31_RS24015 0.55 +1.8 570,842 - EX31_RS24015 0.55 +0.7 570,842 - EX31_RS24015 0.55 +1.2 570,842 - EX31_RS24015 0.55 -1.4 570,842 - EX31_RS24015 0.55 -1.6 570,947 + EX31_RS24015 0.66 +0.5 570,965 + EX31_RS24015 0.68 +1.4 570,965 + EX31_RS24015 0.68 +1.3 570,966 - EX31_RS24015 0.68 +1.1 571,053 + EX31_RS24015 0.77 +1.8 571,160 + EX31_RS24015 0.87 +1.1 571,161 - EX31_RS24015 0.87 +1.4 571,220 + -0.1 571,220 + +0.8 571,220 + +1.8 571,221 - -1.4 571,221 - +2.0 571,221 - -0.2 571,221 - +0.2 571,324 - -1.1 571,324 - +0.8 571,324 - +0.4 571,328 + +0.8 571,328 + +0.2 571,329 - +1.9 571,329 - -1.1 571,329 - -0.6 571,331 + +0.4 571,332 - -1.8 571,389 - +1.6 571,389 - +0.2 571,443 + +0.1 571,443 + +0.9 571,443 + +1.6 571,443 + -0.2 571,444 - -1.8 571,444 - -0.2 571,447 + EX31_RS24020 0.10 +1.6 571,448 - EX31_RS24020 0.10 -1.8 571,646 + EX31_RS24020 0.23 +0.6 571,647 - EX31_RS24020 0.24 -0.2 571,657 + EX31_RS24020 0.24 -0.3 571,796 + EX31_RS24020 0.34 +1.8 571,796 + EX31_RS24020 0.34 +0.3 571,796 + EX31_RS24020 0.34 -0.5 571,796 + EX31_RS24020 0.34 -0.8 571,797 - EX31_RS24020 0.34 -1.7 571,872 - EX31_RS24020 0.39 -0.2 571,970 + EX31_RS24020 0.45 +0.1 571,970 + EX31_RS24020 0.45 +1.1 572,018 + EX31_RS24020 0.49 +0.8 572,062 + EX31_RS24020 0.52 +0.2 572,063 - EX31_RS24020 0.52 +2.8 572,164 + EX31_RS24020 0.58 +0.8 572,165 - EX31_RS24020 0.59 +0.3 572,165 - EX31_RS24020 0.59 -1.1 572,206 + EX31_RS24020 0.61 -0.2 572,206 + EX31_RS24020 0.61 +0.4 572,207 - EX31_RS24020 0.61 -0.8 572,210 + EX31_RS24020 0.62 -0.2 572,210 + EX31_RS24020 0.62 +0.1 572,210 + EX31_RS24020 0.62 -2.0 572,210 + EX31_RS24020 0.62 +0.5 572,210 + EX31_RS24020 0.62 +0.8 572,211 - EX31_RS24020 0.62 +1.0 572,320 + EX31_RS24020 0.69 -0.7 572,320 + EX31_RS24020 0.69 -2.5 572,321 - EX31_RS24020 0.69 -0.5 572,321 - EX31_RS24020 0.69 +0.2 572,455 + EX31_RS24020 0.78 +2.3 572,456 - EX31_RS24020 0.78 -0.5 572,456 - EX31_RS24020 0.78 -0.1 572,456 - EX31_RS24020 0.78 +0.8 572,456 - EX31_RS24020 0.78 +0.8 572,557 + EX31_RS24020 0.85 -1.2 572,590 + EX31_RS24020 0.87 -0.1 572,629 - EX31_RS24020 0.90 +0.8 572,693 + -0.8 572,694 - +0.3 572,770 + +2.8 572,770 + +0.9 572,770 + +1.1 572,770 + +1.3 572,770 + +1.5 572,771 - +0.1 572,771 - +1.0 572,773 + +0.2 572,773 + +0.8 572,774 - +1.8 572,815 + -1.3 572,815 + +1.8 572,815 + +2.0 572,818 + -0.8 572,818 + -1.6 572,819 - +1.0 572,819 - +0.1 572,819 - -0.0 572,867 - +1.5 572,877 + -0.2 572,878 - +1.2 572,878 - +0.1 572,882 + -0.2 572,883 - +1.0 572,894 + -0.5 572,894 + -0.8 572,895 - +1.0 572,895 - -0.2 572,907 - +0.3 572,915 + +1.2 572,916 - -1.2 572,919 + -0.7 572,919 + -0.8 572,919 + +0.2 572,919 + +0.3 572,920 - +0.0 572,920 - -0.4 572,920 - -0.8 572,920 - +1.0 572,935 + +1.5 573,052 - +0.0 573,052 - +0.2 573,052 - +0.8 573,052 - +0.2 573,181 + +1.2 573,181 + +0.3 573,182 - +0.0 573,182 - -1.2 573,182 - -0.8 573,398 + EX31_RS24025 0.35 +1.3 573,399 - EX31_RS24025 0.35 +0.5 573,400 + EX31_RS24025 0.35 -0.7 573,400 + EX31_RS24025 0.35 -1.2 573,400 + EX31_RS24025 0.35 +1.3 573,401 - EX31_RS24025 0.35 +1.3 573,401 - EX31_RS24025 0.35 -1.4 573,401 - EX31_RS24025 0.35 -0.0 573,401 - EX31_RS24025 0.35 +0.0 573,401 - EX31_RS24025 0.35 +0.9 573,668 + EX31_RS24025 0.66 -0.8 573,669 - EX31_RS24025 0.66 -0.7
Or see this region's nucleotide sequence