Strain Fitness in Rahnella sp. WP5 around EX31_RS11740

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
882	+		EX31_RS11735	0.32	+0.2
882	+		EX31_RS11735	0.32	-2.9
883	-		EX31_RS11735	0.32	-3.9
883	-		EX31_RS11735	0.32	-1.9
883	-		EX31_RS11735	0.32	-3.4
883	-		EX31_RS11735	0.32	-1.9
883	-		EX31_RS11735	0.32	-2.1
883	-		EX31_RS11735	0.32	-1.1
883	-		EX31_RS11735	0.32	-1.4
883	-		EX31_RS11735	0.32	-2.5
883	-		EX31_RS11735	0.32	-1.1
883	-		EX31_RS11735	0.32	-1.8
883	-		EX31_RS11735	0.32	-3.2
914	-		EX31_RS11735	0.35	-2.2
937	+		EX31_RS11735	0.38	-3.2
937	+		EX31_RS11735	0.38	-3.2
937	+		EX31_RS11735	0.38	-2.2
937	+		EX31_RS11735	0.38	-1.9
937	+		EX31_RS11735	0.38	-1.1
938	-		EX31_RS11735	0.38	-2.1
938	-		EX31_RS11735	0.38	-2.1
988	+		EX31_RS11735	0.43	-2.0
989	-		EX31_RS11735	0.43	-2.5
989	-		EX31_RS11735	0.43	-0.9
989	-		EX31_RS11735	0.43	-2.2
1,041	+		EX31_RS11735	0.49	+1.2
1,297	-		EX31_RS11735	0.77	-1.1
1,324	-		EX31_RS11735	0.79	-1.4
1,324	-		EX31_RS11735	0.79	-0.8
1,365	+		EX31_RS11735	0.84	-3.5
1,366	-		EX31_RS11735	0.84	-0.4
1,366	-		EX31_RS11735	0.84	-2.8
1,371	+		EX31_RS11735	0.85	-2.2
1,371	+		EX31_RS11735	0.85	-1.9
1,371	+		EX31_RS11735	0.85	+0.2
1,372	-		EX31_RS11735	0.85	+1.2
1,372	-		EX31_RS11735	0.85	-2.4
1,372	-		EX31_RS11735	0.85	-0.8
1,372	-		EX31_RS11735	0.85	-2.6
1,385	+		EX31_RS11735	0.86	-2.1
1,442	+				+0.2
1,443	-				-2.4
1,455	+				-2.2
1,456	-				-2.2
1,456	-				-2.7
1,456	-				-2.1
1,458	+				-3.1
1,458	+				-2.9
1,458	+				-1.6
1,458	+				-1.6
1,458	+				-2.6
1,458	+				-1.6
1,458	+				-2.9
1,459	-				-0.4
1,465	-				-0.6
1,513	-				+0.3
1,516	+				+2.4
1,517	-				+1.1
1,517	-				+0.7
1,796	-				+0.5
1,819	-				+0.9
1,821	+				+0.9
1,821	+				+1.3
1,821	+				+1.3
1,822	-				+0.7
1,822	-				-1.2
1,822	-				+0.4
1,822	-				-0.4
1,862	-				-0.5
1,874	-				+3.0
1,894	-				-0.5
1,894	-				+0.8
1,894	-				+0.4
1,894	-				-0.2
1,894	-				+0.6
1,894	-				-1.2
1,914	+				-0.2
1,914	+				+0.4
1,915	-				+0.3
1,995	+				+0.1
2,015	+				+1.4
2,207	+		EX31_RS11740	0.21	-1.6
2,207	+		EX31_RS11740	0.21	-0.9
2,207	+		EX31_RS11740	0.21	-0.8
2,207	+		EX31_RS11740	0.21	+0.4
2,207	+		EX31_RS11740	0.21	-0.6
2,207	+		EX31_RS11740	0.21	-0.6
2,208	-		EX31_RS11740	0.21	+0.0
2,208	-		EX31_RS11740	0.21	+1.5
2,208	-		EX31_RS11740	0.21	-2.0
2,208	-		EX31_RS11740	0.21	+0.4
2,218	-		EX31_RS11740	0.21	+0.8
2,262	+		EX31_RS11740	0.24	-0.2
2,264	+		EX31_RS11740	0.24	-0.1
2,264	+		EX31_RS11740	0.24	+0.5
2,264	+		EX31_RS11740	0.24	+0.8
2,264	+		EX31_RS11740	0.24	-0.5
2,265	-		EX31_RS11740	0.24	+0.6
2,265	-		EX31_RS11740	0.24	+0.4
2,277	+		EX31_RS11740	0.25	+1.2
2,278	-		EX31_RS11740	0.25	+1.5
2,278	-		EX31_RS11740	0.25	+0.1
2,282	+		EX31_RS11740	0.25	-0.0
2,304	+		EX31_RS11740	0.27	-1.0
2,305	-		EX31_RS11740	0.27	+0.2
2,305	-		EX31_RS11740	0.27	+0.0
2,311	+		EX31_RS11740	0.27	-0.8
2,311	+		EX31_RS11740	0.27	-0.8
2,311	+		EX31_RS11740	0.27	-0.3
2,311	+		EX31_RS11740	0.27	-0.9
2,312	-		EX31_RS11740	0.27	-0.1
2,312	-		EX31_RS11740	0.27	+0.4
2,375	+		EX31_RS11740	0.31	+0.0
2,375	+		EX31_RS11740	0.31	+0.6
2,375	+		EX31_RS11740	0.31	-0.1
2,375	+		EX31_RS11740	0.31	+0.7
2,375	+		EX31_RS11740	0.31	-0.4
2,375	+		EX31_RS11740	0.31	+0.4
2,375	+		EX31_RS11740	0.31	+0.7
2,375	+		EX31_RS11740	0.31	+0.9
2,376	-		EX31_RS11740	0.31	+0.4
2,376	-		EX31_RS11740	0.31	-0.3
2,376	-		EX31_RS11740	0.31	-1.3
2,376	-		EX31_RS11740	0.31	+1.2
2,376	-		EX31_RS11740	0.31	-1.3
2,390	+		EX31_RS11740	0.32	-1.8
2,391	-		EX31_RS11740	0.32	-0.6
2,424	+		EX31_RS11740	0.34	+1.2
2,424	+		EX31_RS11740	0.34	+0.4
2,425	-		EX31_RS11740	0.34	+0.2
2,425	-		EX31_RS11740	0.34	-0.6
2,466	+		EX31_RS11740	0.37	+0.2
2,467	-		EX31_RS11740	0.37	-0.1
2,467	-		EX31_RS11740	0.37	-0.1
2,467	-		EX31_RS11740	0.37	+0.9
2,471	-		EX31_RS11740	0.37	-0.2
2,471	-		EX31_RS11740	0.37	-0.2
2,471	-		EX31_RS11740	0.37	-0.1
2,509	+		EX31_RS11740	0.39	+0.7
2,510	-		EX31_RS11740	0.39	+0.6
2,530	+		EX31_RS11740	0.41	+0.4
2,530	+		EX31_RS11740	0.41	-1.0
2,530	+		EX31_RS11740	0.41	+0.3
2,531	-		EX31_RS11740	0.41	-0.5
2,662	+		EX31_RS11740	0.49	+0.6
2,711	-		EX31_RS11740	0.52	-0.5
2,725	-		EX31_RS11740	0.53	-0.1
2,754	+		EX31_RS11740	0.55	+0.7
2,754	+		EX31_RS11740	0.55	+0.0
2,754	+		EX31_RS11740	0.55	+2.2
2,754	+		EX31_RS11740	0.55	-0.1
2,754	+		EX31_RS11740	0.55	+0.2
2,755	-		EX31_RS11740	0.55	+0.3
2,755	-		EX31_RS11740	0.55	+0.6
2,755	-		EX31_RS11740	0.55	-2.4
2,755	-		EX31_RS11740	0.55	-0.1
2,755	-		EX31_RS11740	0.55	+1.0
2,755	-		EX31_RS11740	0.55	-0.5
2,755	-		EX31_RS11740	0.55	-0.9
2,755	-		EX31_RS11740	0.55	-1.4
2,756	+		EX31_RS11740	0.55	+1.0
2,756	+		EX31_RS11740	0.55	-0.9
2,756	+		EX31_RS11740	0.55	-1.2
2,757	-		EX31_RS11740	0.55	-0.5
2,757	-		EX31_RS11740	0.55	-0.1
2,759	+		EX31_RS11740	0.55	-0.8
2,799	-		EX31_RS11740	0.58	-1.1
2,799	-		EX31_RS11740	0.58	+0.6
2,806	+		EX31_RS11740	0.58	+0.3
2,806	+		EX31_RS11740	0.58	+0.4
2,807	-		EX31_RS11740	0.58	+1.2
2,807	-		EX31_RS11740	0.58	-0.8
2,824	-		EX31_RS11740	0.59	+0.2
2,872	+		EX31_RS11740	0.62	-0.5
2,875	-		EX31_RS11740	0.62	-0.9
3,050	+		EX31_RS11740	0.73	+0.2
3,050	+		EX31_RS11740	0.73	+0.9
3,050	+		EX31_RS11740	0.73	-1.6
3,050	+		EX31_RS11740	0.73	+0.3
3,050	+		EX31_RS11740	0.73	+0.4
3,051	-		EX31_RS11740	0.73	-0.4
3,051	-		EX31_RS11740	0.73	+0.5
3,051	-		EX31_RS11740	0.73	+0.1
3,051	-		EX31_RS11740	0.73	+1.8
3,051	-		EX31_RS11740	0.73	+0.2
3,051	-		EX31_RS11740	0.73	-0.6
3,053	+		EX31_RS11740	0.73	-1.4
3,053	+		EX31_RS11740	0.73	-0.1
3,053	+		EX31_RS11740	0.73	+0.9
3,053	+		EX31_RS11740	0.73	+0.2
3,053	+		EX31_RS11740	0.73	-2.1
3,053	+		EX31_RS11740	0.73	+0.2
3,053	+		EX31_RS11740	0.73	+0.2
3,053	+		EX31_RS11740	0.73	+0.6
3,054	-		EX31_RS11740	0.73	+1.1
3,054	-		EX31_RS11740	0.73	-1.4
3,054	-		EX31_RS11740	0.73	+1.2
3,054	-		EX31_RS11740	0.73	-1.3
3,054	-		EX31_RS11740	0.73	+0.8
3,054	-		EX31_RS11740	0.73	-0.9
3,076	-		EX31_RS11740	0.75	+1.0
3,090	-		EX31_RS11740	0.76	+0.2
3,157	+		EX31_RS11740	0.80	+1.2
3,157	+		EX31_RS11740	0.80	+0.3
3,157	+		EX31_RS11740	0.80	+0.4
3,157	+		EX31_RS11740	0.80	-0.8
3,158	-		EX31_RS11740	0.80	-0.5
3,158	-		EX31_RS11740	0.80	-0.2
3,158	-		EX31_RS11740	0.80	+1.0
3,279	+		EX31_RS11740	0.88	-0.9
3,280	-		EX31_RS11740	0.88	+0.3
3,434	+				+0.2
3,434	+				-1.2
3,435	-				+0.0
3,435	-				+0.2
3,490	+				-0.1
3,490	+				-0.8
3,491	-				+0.6
3,491	-				-0.9
3,491	-				-0.8
3,496	+				+0.5
3,496	+				-0.1
3,497	-				+1.5
3,511	-				+0.3
3,532	+				-1.8
3,532	+				-1.1
3,533	-				-1.2
3,533	-				-0.1
3,533	-				-0.2
3,599	+				-0.4
3,600	-				-0.5
3,600	-				-0.6
3,649	+				-1.6
3,650	-				+0.1
3,714	-		EX31_RS11745	0.15	-0.4
3,714	-		EX31_RS11745	0.15	-1.7
3,753	+		EX31_RS11745	0.18	+0.1
3,753	+		EX31_RS11745	0.18	-0.6
3,753	+		EX31_RS11745	0.18	+0.7
3,753	+		EX31_RS11745	0.18	+0.9
3,753	+		EX31_RS11745	0.18	+0.5
3,753	+		EX31_RS11745	0.18	+1.6
3,753	+		EX31_RS11745	0.18	-0.4
3,753	+		EX31_RS11745	0.18	-1.1
3,754	-		EX31_RS11745	0.18	-1.1
3,754	-		EX31_RS11745	0.18	+1.1
3,754	-		EX31_RS11745	0.18	+1.2
3,754	-		EX31_RS11745	0.18	-1.9
3,754	-		EX31_RS11745	0.18	+0.1
3,754	-		EX31_RS11745	0.18	-0.8
3,754	-		EX31_RS11745	0.18	+0.4
3,754	-		EX31_RS11745	0.18	-1.6
3,785	+		EX31_RS11745	0.20	+1.2
3,785	+		EX31_RS11745	0.20	-0.1
3,785	+		EX31_RS11745	0.20	+1.0
3,785	+		EX31_RS11745	0.20	-0.8
3,785	+		EX31_RS11745	0.20	+0.1
3,785	+		EX31_RS11745	0.20	+0.9
3,786	-		EX31_RS11745	0.20	+0.9
3,786	-		EX31_RS11745	0.20	-0.2
3,786	-		EX31_RS11745	0.20	-0.2
3,786	-		EX31_RS11745	0.20	+3.2
3,786	-		EX31_RS11745	0.20	-0.2
3,786	-		EX31_RS11745	0.20	+0.4
3,832	+		EX31_RS11745	0.24	+0.8
3,832	+		EX31_RS11745	0.24	-0.2
3,832	+		EX31_RS11745	0.24	-0.3
3,832	+		EX31_RS11745	0.24	+0.1
3,832	+		EX31_RS11745	0.24	+0.1
3,832	+		EX31_RS11745	0.24	-0.2
3,832	+		EX31_RS11745	0.24	-0.3
3,833	-		EX31_RS11745	0.24	-0.5
3,833	-		EX31_RS11745	0.24	-0.4
3,833	-		EX31_RS11745	0.24	+0.9
3,833	-		EX31_RS11745	0.24	-0.1
3,833	-		EX31_RS11745	0.24	+0.6
3,833	-		EX31_RS11745	0.24	-0.3
3,833	-		EX31_RS11745	0.24	+0.5
3,833	-		EX31_RS11745	0.24	-0.3
3,836	+		EX31_RS11745	0.24	-0.8
3,836	+		EX31_RS11745	0.24	-0.9
3,836	+		EX31_RS11745	0.24	+0.6
3,836	+		EX31_RS11745	0.24	-2.2
3,837	-		EX31_RS11745	0.24	+1.0
3,837	-		EX31_RS11745	0.24	+0.4
3,854	+		EX31_RS11745	0.25	+2.6
3,892	+		EX31_RS11745	0.28	+0.3
3,892	+		EX31_RS11745	0.28	-0.4
3,935	-		EX31_RS11745	0.32	+0.6
3,959	+		EX31_RS11745	0.33	-0.0
3,960	-		EX31_RS11745	0.33	-1.1
3,960	-		EX31_RS11745	0.33	+0.7
3,961	+		EX31_RS11745	0.33	+1.1
3,968	+		EX31_RS11745	0.34	+0.3
3,968	+		EX31_RS11745	0.34	-0.3
4,014	+		EX31_RS11745	0.37	-0.1
4,014	+		EX31_RS11745	0.37	-0.6
4,015	-		EX31_RS11745	0.38	+0.4
4,015	-		EX31_RS11745	0.38	+0.2
4,216	+		EX31_RS11745	0.53	+0.6
4,217	-		EX31_RS11745	0.53	+0.1
4,217	-		EX31_RS11745	0.53	+0.6
4,240	-		EX31_RS11745	0.55	-1.0
4,240	-		EX31_RS11745	0.55	+1.0
4,240	-		EX31_RS11745	0.55	-1.1
4,263	-		EX31_RS11745	0.56	+0.0
4,277	-		EX31_RS11745	0.57	+0.0
4,277	-		EX31_RS11745	0.57	+0.6
4,307	+		EX31_RS11745	0.60	-1.9
4,364	+		EX31_RS11745	0.64	-0.1
4,365	-		EX31_RS11745	0.64	-0.2
4,374	+		EX31_RS11745	0.65	-0.2
4,374	+		EX31_RS11745	0.65	-0.9
4,375	-		EX31_RS11745	0.65	-0.1
4,375	-		EX31_RS11745	0.65	+0.2
4,375	-		EX31_RS11745	0.65	+1.5
4,375	-		EX31_RS11745	0.65	+1.0
4,441	+		EX31_RS11745	0.70	-1.6
4,466	+		EX31_RS11745	0.72	+0.7
4,466	+		EX31_RS11745	0.72	-0.4
4,466	+		EX31_RS11745	0.72	-0.1
4,466	+		EX31_RS11745	0.72	+0.3
4,466	+		EX31_RS11745	0.72	+0.3
4,466	+		EX31_RS11745	0.72	+0.2
4,466	+		EX31_RS11745	0.72	-0.2
4,467	-		EX31_RS11745	0.72	+1.2
4,467	-		EX31_RS11745	0.72	-1.2
4,467	-		EX31_RS11745	0.72	-0.2
4,467	-		EX31_RS11745	0.72	+1.5
4,467	-		EX31_RS11745	0.72	-0.4
4,467	-		EX31_RS11745	0.72	-0.5
4,468	+		EX31_RS11745	0.72	+1.4
4,468	+		EX31_RS11745	0.72	-0.9
4,468	+		EX31_RS11745	0.72	+0.3
4,468	+		EX31_RS11745	0.72	+0.0
4,468	+		EX31_RS11745	0.72	-0.5
4,468	+		EX31_RS11745	0.72	+0.0
4,468	+		EX31_RS11745	0.72	-0.3
4,469	-		EX31_RS11745	0.72	-1.6
4,469	-		EX31_RS11745	0.72	-0.0
4,469	-		EX31_RS11745	0.72	+0.0
4,469	-		EX31_RS11745	0.72	+0.2
4,469	-		EX31_RS11745	0.72	-0.1