Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS10385 and EX31_RS10390 are separated by 98 nucleotides EX31_RS10390 and EX31_RS10395 are separated by 294 nucleotides
EX31_RS10385: EX31_RS10385 - arylamine N-acetyltransferase, at 287,404 to 288,192
_RS10385
EX31_RS10390: EX31_RS10390 - PLP-dependent aminotransferase family protein, at 288,291 to 289,727
_RS10390
EX31_RS10395: EX31_RS10395 - NAD(P)-binding domain-containing protein, at 290,022 to 290,780
_RS10395
Position (kb) 288
289
290 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 287.343 kb on + strand at 287.344 kb on - strand at 287.344 kb on - strand at 287.344 kb on - strand at 287.344 kb on - strand at 287.344 kb on - strand at 287.345 kb on + strand at 287.345 kb on + strand at 287.346 kb on - strand at 287.346 kb on - strand at 287.362 kb on + strand at 287.363 kb on - strand at 287.363 kb on - strand at 287.365 kb on - strand at 287.378 kb on - strand at 287.381 kb on + strand at 287.382 kb on - strand at 287.382 kb on - strand at 287.423 kb on + strand at 287.423 kb on + strand at 287.423 kb on + strand at 287.424 kb on - strand at 287.424 kb on - strand at 287.619 kb on - strand, within EX31_RS10385 at 287.669 kb on + strand, within EX31_RS10385 at 287.711 kb on + strand, within EX31_RS10385 at 287.712 kb on - strand, within EX31_RS10385 at 287.712 kb on - strand, within EX31_RS10385 at 287.719 kb on - strand, within EX31_RS10385 at 287.721 kb on + strand, within EX31_RS10385 at 287.734 kb on - strand, within EX31_RS10385 at 287.783 kb on - strand, within EX31_RS10385 at 287.802 kb on + strand, within EX31_RS10385 at 287.802 kb on + strand, within EX31_RS10385 at 287.807 kb on + strand, within EX31_RS10385 at 287.808 kb on - strand, within EX31_RS10385 at 287.808 kb on - strand, within EX31_RS10385 at 287.821 kb on + strand, within EX31_RS10385 at 287.821 kb on + strand, within EX31_RS10385 at 287.860 kb on + strand, within EX31_RS10385 at 287.861 kb on - strand, within EX31_RS10385 at 287.895 kb on - strand, within EX31_RS10385 at 287.895 kb on - strand, within EX31_RS10385 at 287.928 kb on + strand, within EX31_RS10385 at 287.931 kb on + strand, within EX31_RS10385 at 287.932 kb on - strand, within EX31_RS10385 at 287.935 kb on + strand, within EX31_RS10385 at 287.936 kb on - strand, within EX31_RS10385 at 287.936 kb on - strand, within EX31_RS10385 at 287.936 kb on - strand, within EX31_RS10385 at 287.936 kb on - strand, within EX31_RS10385 at 287.959 kb on + strand, within EX31_RS10385 at 287.975 kb on + strand, within EX31_RS10385 at 288.056 kb on - strand, within EX31_RS10385 at 288.143 kb on + strand at 288.161 kb on + strand at 288.193 kb on - strand at 288.226 kb on + strand at 288.227 kb on - strand at 288.227 kb on - strand at 288.227 kb on - strand at 288.227 kb on - strand at 288.228 kb on + strand at 288.228 kb on + strand at 288.229 kb on - strand at 288.229 kb on - strand at 288.229 kb on - strand at 288.229 kb on - strand at 288.229 kb on - strand at 288.229 kb on - strand at 288.252 kb on - strand at 288.252 kb on - strand at 288.252 kb on - strand at 288.254 kb on - strand at 288.280 kb on + strand at 288.351 kb on - strand at 288.351 kb on - strand at 288.368 kb on - strand at 288.368 kb on - strand at 288.368 kb on - strand at 288.425 kb on + strand at 288.671 kb on + strand, within EX31_RS10390 at 288.672 kb on - strand, within EX31_RS10390 at 288.672 kb on - strand, within EX31_RS10390 at 288.729 kb on + strand, within EX31_RS10390 at 288.730 kb on - strand, within EX31_RS10390 at 288.730 kb on - strand, within EX31_RS10390 at 288.768 kb on - strand, within EX31_RS10390 at 288.768 kb on - strand, within EX31_RS10390 at 288.769 kb on + strand, within EX31_RS10390 at 288.868 kb on + strand, within EX31_RS10390 at 288.868 kb on + strand, within EX31_RS10390 at 288.868 kb on + strand, within EX31_RS10390 at 288.869 kb on - strand, within EX31_RS10390 at 288.869 kb on - strand, within EX31_RS10390 at 288.869 kb on - strand, within EX31_RS10390 at 288.869 kb on - strand, within EX31_RS10390 at 288.869 kb on - strand, within EX31_RS10390 at 288.869 kb on - strand, within EX31_RS10390 at 288.909 kb on + strand, within EX31_RS10390 at 288.909 kb on + strand, within EX31_RS10390 at 288.940 kb on + strand, within EX31_RS10390 at 288.940 kb on + strand, within EX31_RS10390 at 288.940 kb on + strand, within EX31_RS10390 at 288.940 kb on + strand, within EX31_RS10390 at 288.941 kb on - strand, within EX31_RS10390 at 289.010 kb on + strand, within EX31_RS10390 at 289.011 kb on - strand, within EX31_RS10390 at 289.150 kb on + strand, within EX31_RS10390 at 289.150 kb on + strand, within EX31_RS10390 at 289.150 kb on + strand, within EX31_RS10390 at 289.150 kb on + strand, within EX31_RS10390 at 289.150 kb on + strand, within EX31_RS10390 at 289.150 kb on + strand, within EX31_RS10390 at 289.150 kb on + strand, within EX31_RS10390 at 289.150 kb on + strand, within EX31_RS10390 at 289.151 kb on - strand, within EX31_RS10390 at 289.151 kb on - strand, within EX31_RS10390 at 289.151 kb on - strand, within EX31_RS10390 at 289.151 kb on - strand, within EX31_RS10390 at 289.151 kb on - strand, within EX31_RS10390 at 289.151 kb on - strand, within EX31_RS10390 at 289.151 kb on - strand, within EX31_RS10390 at 289.151 kb on - strand, within EX31_RS10390 at 289.151 kb on - strand, within EX31_RS10390 at 289.152 kb on + strand, within EX31_RS10390 at 289.152 kb on + strand, within EX31_RS10390 at 289.152 kb on + strand, within EX31_RS10390 at 289.152 kb on + strand, within EX31_RS10390 at 289.152 kb on + strand, within EX31_RS10390 at 289.153 kb on - strand, within EX31_RS10390 at 289.225 kb on - strand, within EX31_RS10390 at 289.225 kb on - strand, within EX31_RS10390 at 289.367 kb on + strand, within EX31_RS10390 at 289.368 kb on - strand, within EX31_RS10390 at 289.369 kb on + strand, within EX31_RS10390 at 289.369 kb on + strand, within EX31_RS10390 at 289.387 kb on - strand, within EX31_RS10390 at 289.387 kb on - strand, within EX31_RS10390 at 289.387 kb on - strand, within EX31_RS10390 at 289.432 kb on + strand, within EX31_RS10390 at 289.433 kb on - strand, within EX31_RS10390 at 289.549 kb on + strand, within EX31_RS10390 at 289.732 kb on + strand at 289.732 kb on + strand at 289.732 kb on + strand at 289.732 kb on + strand at 289.733 kb on - strand at 289.733 kb on - strand at 289.733 kb on - strand at 289.740 kb on + strand at 289.807 kb on - strand at 289.819 kb on + strand at 289.819 kb on + strand at 289.819 kb on + strand at 289.820 kb on - strand at 289.822 kb on + strand at 289.822 kb on + strand at 289.822 kb on + strand at 289.919 kb on + strand at 289.941 kb on - strand at 289.962 kb on - strand at 289.965 kb on - strand at 289.984 kb on - strand at 289.986 kb on - strand at 289.998 kb on + strand at 289.998 kb on + strand at 289.998 kb on + strand at 289.998 kb on + strand at 289.998 kb on + strand at 289.998 kb on + strand at 289.998 kb on + strand at 289.999 kb on - strand at 289.999 kb on - strand at 289.999 kb on - strand at 289.999 kb on - strand at 289.999 kb on - strand at 289.999 kb on - strand at 289.999 kb on - strand at 289.999 kb on - strand at 290.000 kb on + strand at 290.001 kb on - strand at 290.001 kb on - strand at 290.001 kb on - strand at 290.018 kb on - strand at 290.018 kb on - strand at 290.018 kb on - strand at 290.018 kb on - strand at 290.105 kb on + strand, within EX31_RS10395 at 290.207 kb on + strand, within EX31_RS10395 at 290.207 kb on + strand, within EX31_RS10395 at 290.208 kb on - strand, within EX31_RS10395 at 290.208 kb on - strand, within EX31_RS10395 at 290.238 kb on + strand, within EX31_RS10395 at 290.241 kb on - strand, within EX31_RS10395 at 290.295 kb on + strand, within EX31_RS10395 at 290.295 kb on + strand, within EX31_RS10395 at 290.295 kb on + strand, within EX31_RS10395 at 290.295 kb on + strand, within EX31_RS10395 at 290.295 kb on + strand, within EX31_RS10395 at 290.402 kb on + strand, within EX31_RS10395 at 290.403 kb on - strand, within EX31_RS10395 at 290.405 kb on + strand, within EX31_RS10395 at 290.526 kb on - strand, within EX31_RS10395 at 290.546 kb on - strand, within EX31_RS10395 at 290.546 kb on - strand, within EX31_RS10395 at 290.598 kb on + strand, within EX31_RS10395 at 290.598 kb on + strand, within EX31_RS10395 at 290.598 kb on + strand, within EX31_RS10395 at 290.599 kb on - strand, within EX31_RS10395 at 290.610 kb on + strand, within EX31_RS10395 at 290.610 kb on + strand, within EX31_RS10395 at 290.610 kb on + strand, within EX31_RS10395 at 290.611 kb on - strand, within EX31_RS10395
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 287,343 + +1.1 287,344 - -1.5 287,344 - +0.4 287,344 - -2.1 287,344 - -0.6 287,344 - -1.2 287,345 + +2.0 287,345 + -2.1 287,346 - +1.0 287,346 - -0.3 287,362 + +1.3 287,363 - -1.6 287,363 - -1.3 287,365 - -0.1 287,378 - +0.7 287,381 + -0.2 287,382 - +0.9 287,382 - -1.1 287,423 + +1.1 287,423 + -1.1 287,423 + +2.3 287,424 - -1.8 287,424 - +0.5 287,619 - EX31_RS10385 0.27 +1.5 287,669 + EX31_RS10385 0.34 -2.3 287,711 + EX31_RS10385 0.39 -0.1 287,712 - EX31_RS10385 0.39 -0.5 287,712 - EX31_RS10385 0.39 +0.9 287,719 - EX31_RS10385 0.40 -0.5 287,721 + EX31_RS10385 0.40 +0.5 287,734 - EX31_RS10385 0.42 -0.6 287,783 - EX31_RS10385 0.48 +0.9 287,802 + EX31_RS10385 0.50 +0.5 287,802 + EX31_RS10385 0.50 -0.2 287,807 + EX31_RS10385 0.51 -1.0 287,808 - EX31_RS10385 0.51 -0.9 287,808 - EX31_RS10385 0.51 -0.1 287,821 + EX31_RS10385 0.53 +1.5 287,821 + EX31_RS10385 0.53 +0.5 287,860 + EX31_RS10385 0.58 -1.8 287,861 - EX31_RS10385 0.58 -0.2 287,895 - EX31_RS10385 0.62 +1.5 287,895 - EX31_RS10385 0.62 -1.2 287,928 + EX31_RS10385 0.66 -1.1 287,931 + EX31_RS10385 0.67 -2.1 287,932 - EX31_RS10385 0.67 -0.5 287,935 + EX31_RS10385 0.67 -2.5 287,936 - EX31_RS10385 0.67 +0.5 287,936 - EX31_RS10385 0.67 +0.7 287,936 - EX31_RS10385 0.67 +0.2 287,936 - EX31_RS10385 0.67 -1.5 287,959 + EX31_RS10385 0.70 +0.4 287,975 + EX31_RS10385 0.72 +0.2 288,056 - EX31_RS10385 0.83 +0.3 288,143 + -0.2 288,161 + +2.9 288,193 - -0.8 288,226 + +0.5 288,227 - -0.8 288,227 - +0.1 288,227 - +0.4 288,227 - -0.1 288,228 + -1.1 288,228 + -0.1 288,229 - +1.3 288,229 - +0.3 288,229 - -0.3 288,229 - -0.8 288,229 - +2.1 288,229 - -0.3 288,252 - +0.5 288,252 - -0.3 288,252 - -0.3 288,254 - -1.3 288,280 + +1.1 288,351 - +2.2 288,351 - +0.3 288,368 - -0.5 288,368 - -0.3 288,368 - +0.5 288,425 + +0.5 288,671 + EX31_RS10390 0.26 -2.8 288,672 - EX31_RS10390 0.27 +1.9 288,672 - EX31_RS10390 0.27 +0.3 288,729 + EX31_RS10390 0.30 +0.5 288,730 - EX31_RS10390 0.31 +0.5 288,730 - EX31_RS10390 0.31 +3.1 288,768 - EX31_RS10390 0.33 +0.5 288,768 - EX31_RS10390 0.33 -1.5 288,769 + EX31_RS10390 0.33 +0.7 288,868 + EX31_RS10390 0.40 -0.9 288,868 + EX31_RS10390 0.40 -0.8 288,868 + EX31_RS10390 0.40 +1.3 288,869 - EX31_RS10390 0.40 -0.5 288,869 - EX31_RS10390 0.40 -0.2 288,869 - EX31_RS10390 0.40 +0.1 288,869 - EX31_RS10390 0.40 +0.5 288,869 - EX31_RS10390 0.40 -0.1 288,869 - EX31_RS10390 0.40 -1.5 288,909 + EX31_RS10390 0.43 -0.1 288,909 + EX31_RS10390 0.43 +0.5 288,940 + EX31_RS10390 0.45 +0.5 288,940 + EX31_RS10390 0.45 -0.7 288,940 + EX31_RS10390 0.45 -1.1 288,940 + EX31_RS10390 0.45 +2.7 288,941 - EX31_RS10390 0.45 -0.5 289,010 + EX31_RS10390 0.50 +1.0 289,011 - EX31_RS10390 0.50 -0.1 289,150 + EX31_RS10390 0.60 -1.3 289,150 + EX31_RS10390 0.60 +1.0 289,150 + EX31_RS10390 0.60 -0.5 289,150 + EX31_RS10390 0.60 -1.2 289,150 + EX31_RS10390 0.60 +0.1 289,150 + EX31_RS10390 0.60 -0.1 289,150 + EX31_RS10390 0.60 -1.8 289,150 + EX31_RS10390 0.60 -1.1 289,151 - EX31_RS10390 0.60 -2.5 289,151 - EX31_RS10390 0.60 +0.8 289,151 - EX31_RS10390 0.60 -0.2 289,151 - EX31_RS10390 0.60 +1.1 289,151 - EX31_RS10390 0.60 -1.3 289,151 - EX31_RS10390 0.60 -0.1 289,151 - EX31_RS10390 0.60 -0.2 289,151 - EX31_RS10390 0.60 +0.2 289,151 - EX31_RS10390 0.60 -0.1 289,152 + EX31_RS10390 0.60 -2.9 289,152 + EX31_RS10390 0.60 +0.8 289,152 + EX31_RS10390 0.60 +0.2 289,152 + EX31_RS10390 0.60 +2.1 289,152 + EX31_RS10390 0.60 -1.8 289,153 - EX31_RS10390 0.60 +0.2 289,225 - EX31_RS10390 0.65 +0.9 289,225 - EX31_RS10390 0.65 +0.9 289,367 + EX31_RS10390 0.75 -0.1 289,368 - EX31_RS10390 0.75 +0.5 289,369 + EX31_RS10390 0.75 +0.0 289,369 + EX31_RS10390 0.75 -0.1 289,387 - EX31_RS10390 0.76 -0.1 289,387 - EX31_RS10390 0.76 -1.5 289,387 - EX31_RS10390 0.76 -1.5 289,432 + EX31_RS10390 0.79 -0.7 289,433 - EX31_RS10390 0.79 +0.5 289,549 + EX31_RS10390 0.88 -1.1 289,732 + -1.6 289,732 + +0.5 289,732 + -0.9 289,732 + -0.1 289,733 - +0.9 289,733 - +1.8 289,733 - +0.5 289,740 + +0.2 289,807 - +3.9 289,819 + -2.1 289,819 + +0.8 289,819 + -0.5 289,820 - -0.1 289,822 + -0.2 289,822 + -1.5 289,822 + -0.8 289,919 + -0.1 289,941 - -0.7 289,962 - -0.5 289,965 - -0.1 289,984 - +1.1 289,986 - +0.5 289,998 + -0.3 289,998 + -0.8 289,998 + +0.3 289,998 + -1.3 289,998 + +0.5 289,998 + +0.1 289,998 + -1.9 289,999 - +0.5 289,999 - +1.4 289,999 - -1.5 289,999 - -1.0 289,999 - -1.6 289,999 - -0.4 289,999 - -0.2 289,999 - -0.4 290,000 + +2.9 290,001 - -0.4 290,001 - +0.9 290,001 - +0.3 290,018 - +1.5 290,018 - -0.8 290,018 - +0.9 290,018 - -0.1 290,105 + EX31_RS10395 0.11 +0.5 290,207 + EX31_RS10395 0.24 -0.3 290,207 + EX31_RS10395 0.24 -0.5 290,208 - EX31_RS10395 0.25 -0.5 290,208 - EX31_RS10395 0.25 +0.8 290,238 + EX31_RS10395 0.28 -0.8 290,241 - EX31_RS10395 0.29 +0.1 290,295 + EX31_RS10395 0.36 +0.3 290,295 + EX31_RS10395 0.36 +0.5 290,295 + EX31_RS10395 0.36 +0.1 290,295 + EX31_RS10395 0.36 +1.3 290,295 + EX31_RS10395 0.36 +0.2 290,402 + EX31_RS10395 0.50 +0.9 290,403 - EX31_RS10395 0.50 -0.1 290,405 + EX31_RS10395 0.50 -0.6 290,526 - EX31_RS10395 0.66 +0.9 290,546 - EX31_RS10395 0.69 -0.1 290,546 - EX31_RS10395 0.69 +0.5 290,598 + EX31_RS10395 0.76 +0.9 290,598 + EX31_RS10395 0.76 +1.5 290,598 + EX31_RS10395 0.76 +0.1 290,599 - EX31_RS10395 0.76 +1.5 290,610 + EX31_RS10395 0.77 -0.2 290,610 + EX31_RS10395 0.77 +0.3 290,610 + EX31_RS10395 0.77 -1.5 290,611 - EX31_RS10395 0.78 +1.1
Or see this region's nucleotide sequence