Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS03460 and EX31_RS03465 are separated by 330 nucleotides EX31_RS03465 and EX31_RS03475 are separated by 208 nucleotides
EX31_RS03460: EX31_RS03460 - glycerophosphodiester phosphodiesterase, at 181,664 to 183,994
_RS03460
EX31_RS03465: EX31_RS03465 - dihydrolipoyl dehydrogenase, at 184,325 to 185,752
_RS03465
EX31_RS03475: EX31_RS03475 - pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase, at 185,961 to 187,859
_RS03475
Position (kb) 184
185
186 Strain fitness (log2 ratio) -2
-1
0
1 at 183.339 kb on - strand, within EX31_RS03460 at 183.419 kb on + strand, within EX31_RS03460 at 183.661 kb on + strand, within EX31_RS03460 at 183.675 kb on + strand, within EX31_RS03460 at 183.675 kb on + strand, within EX31_RS03460 at 183.675 kb on + strand, within EX31_RS03460 at 183.770 kb on + strand at 183.770 kb on + strand at 183.771 kb on - strand at 183.779 kb on - strand at 183.788 kb on + strand at 183.789 kb on - strand at 183.789 kb on - strand at 183.789 kb on - strand at 183.878 kb on - strand at 183.878 kb on - strand at 183.878 kb on - strand at 183.879 kb on + strand at 183.879 kb on + strand at 183.880 kb on - strand at 183.940 kb on + strand at 183.967 kb on + strand at 183.994 kb on + strand at 184.043 kb on + strand at 184.043 kb on + strand at 184.088 kb on + strand at 184.091 kb on - strand at 184.252 kb on + strand at 185.766 kb on - strand at 185.962 kb on + strand at 185.963 kb on - strand at 185.963 kb on - strand at 185.963 kb on - strand at 185.963 kb on - strand at 186.270 kb on - strand, within EX31_RS03475
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 183,339 - EX31_RS03460 0.72 -0.4 183,419 + EX31_RS03460 0.75 -0.5 183,661 + EX31_RS03460 0.86 -1.4 183,675 + EX31_RS03460 0.86 +1.4 183,675 + EX31_RS03460 0.86 -0.8 183,675 + EX31_RS03460 0.86 +1.1 183,770 + +0.5 183,770 + +1.1 183,771 - +0.5 183,779 - +0.7 183,788 + -1.2 183,789 - +0.4 183,789 - -0.4 183,789 - +0.7 183,878 - +0.2 183,878 - -2.1 183,878 - +0.8 183,879 + +1.1 183,879 + -0.9 183,880 - -0.1 183,940 + -1.2 183,967 + -1.2 183,994 + -2.0 184,043 + +0.7 184,043 + +0.1 184,088 + +0.7 184,091 - -1.5 184,252 + +0.2 185,766 - -0.5 185,962 + -1.0 185,963 - +0.9 185,963 - +0.3 185,963 - -1.9 185,963 - +0.4 186,270 - EX31_RS03475 0.16 +1.1
Or see this region's nucleotide sequence