Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS00745 and CA265_RS00750 are separated by 346 nucleotides CA265_RS00750 and CA265_RS00755 are separated by 86 nucleotides CA265_RS00755 and CA265_RS00760 are separated by 71 nucleotides
CA265_RS00745: CA265_RS00745 - glucuronyl hydrolase, at 180,071 to 181,261
_RS00745
CA265_RS00750: CA265_RS00750 - hypothetical protein, at 181,608 to 182,831
_RS00750
CA265_RS00755: CA265_RS00755 - 5-dehydro-4-deoxy-D-glucuronate isomerase, at 182,918 to 183,757
_RS00755
CA265_RS00760: CA265_RS00760 - 2-deoxy-D-gluconate 3-dehydrogenase, at 183,829 to 184,593
_RS00760
Position (kb) 181
182
183 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 180.670 kb on + strand, within CA265_RS00745 at 180.722 kb on + strand, within CA265_RS00745 at 180.732 kb on + strand, within CA265_RS00745 at 180.737 kb on + strand, within CA265_RS00745 at 180.738 kb on - strand, within CA265_RS00745 at 180.830 kb on + strand, within CA265_RS00745 at 180.830 kb on + strand, within CA265_RS00745 at 180.830 kb on + strand, within CA265_RS00745 at 180.831 kb on - strand, within CA265_RS00745 at 180.831 kb on - strand, within CA265_RS00745 at 180.836 kb on + strand, within CA265_RS00745 at 180.836 kb on + strand, within CA265_RS00745 at 180.837 kb on - strand, within CA265_RS00745 at 180.837 kb on - strand, within CA265_RS00745 at 180.839 kb on - strand, within CA265_RS00745 at 180.904 kb on + strand, within CA265_RS00745 at 180.907 kb on - strand, within CA265_RS00745 at 180.910 kb on - strand, within CA265_RS00745 at 180.940 kb on - strand, within CA265_RS00745 at 181.024 kb on - strand, within CA265_RS00745 at 181.037 kb on + strand, within CA265_RS00745 at 181.038 kb on - strand, within CA265_RS00745 at 181.092 kb on - strand, within CA265_RS00745 at 181.112 kb on + strand, within CA265_RS00745 at 181.112 kb on + strand, within CA265_RS00745 at 181.113 kb on - strand, within CA265_RS00745 at 181.146 kb on + strand at 181.157 kb on - strand at 181.157 kb on - strand at 181.259 kb on + strand at 181.260 kb on - strand at 181.462 kb on + strand at 181.507 kb on + strand at 181.508 kb on - strand at 181.807 kb on + strand, within CA265_RS00750 at 181.905 kb on - strand, within CA265_RS00750 at 182.007 kb on - strand, within CA265_RS00750 at 182.007 kb on - strand, within CA265_RS00750 at 182.098 kb on + strand, within CA265_RS00750 at 182.117 kb on - strand, within CA265_RS00750 at 182.121 kb on - strand, within CA265_RS00750 at 182.136 kb on + strand, within CA265_RS00750 at 182.252 kb on - strand, within CA265_RS00750 at 182.268 kb on - strand, within CA265_RS00750 at 182.299 kb on - strand, within CA265_RS00750 at 182.410 kb on - strand, within CA265_RS00750 at 182.422 kb on + strand, within CA265_RS00750 at 182.422 kb on + strand, within CA265_RS00750 at 182.451 kb on + strand, within CA265_RS00750 at 182.478 kb on + strand, within CA265_RS00750 at 182.483 kb on + strand, within CA265_RS00750 at 182.539 kb on - strand, within CA265_RS00750 at 182.585 kb on + strand, within CA265_RS00750 at 182.585 kb on + strand, within CA265_RS00750 at 182.590 kb on + strand, within CA265_RS00750 at 182.591 kb on - strand, within CA265_RS00750 at 182.592 kb on + strand, within CA265_RS00750 at 182.593 kb on - strand, within CA265_RS00750 at 182.674 kb on - strand, within CA265_RS00750 at 182.692 kb on + strand, within CA265_RS00750 at 182.692 kb on + strand, within CA265_RS00750 at 182.693 kb on - strand, within CA265_RS00750 at 182.693 kb on - strand, within CA265_RS00750 at 182.695 kb on - strand, within CA265_RS00750 at 182.695 kb on - strand, within CA265_RS00750 at 182.695 kb on - strand, within CA265_RS00750 at 182.696 kb on + strand, within CA265_RS00750 at 182.697 kb on - strand, within CA265_RS00750 at 182.717 kb on - strand at 182.817 kb on - strand at 182.827 kb on - strand at 182.830 kb on - strand at 182.838 kb on + strand at 182.839 kb on - strand at 182.841 kb on + strand at 182.846 kb on - strand at 182.853 kb on - strand at 182.962 kb on + strand at 182.963 kb on - strand at 183.036 kb on + strand, within CA265_RS00755 at 183.042 kb on + strand, within CA265_RS00755 at 183.060 kb on - strand, within CA265_RS00755 at 183.060 kb on - strand, within CA265_RS00755 at 183.061 kb on + strand, within CA265_RS00755 at 183.061 kb on + strand, within CA265_RS00755 at 183.061 kb on + strand, within CA265_RS00755 at 183.061 kb on + strand, within CA265_RS00755 at 183.062 kb on - strand, within CA265_RS00755 at 183.062 kb on - strand, within CA265_RS00755 at 183.062 kb on - strand, within CA265_RS00755 at 183.062 kb on - strand, within CA265_RS00755 at 183.062 kb on - strand, within CA265_RS00755 at 183.096 kb on + strand, within CA265_RS00755 at 183.160 kb on + strand, within CA265_RS00755 at 183.161 kb on - strand, within CA265_RS00755 at 183.163 kb on + strand at 183.181 kb on + strand, within CA265_RS00755 at 183.218 kb on + strand, within CA265_RS00755 at 183.219 kb on - strand, within CA265_RS00755 at 183.220 kb on + strand, within CA265_RS00755 at 183.275 kb on - strand, within CA265_RS00755 at 183.298 kb on - strand, within CA265_RS00755 at 183.299 kb on + strand, within CA265_RS00755 at 183.326 kb on - strand, within CA265_RS00755 at 183.326 kb on - strand, within CA265_RS00755 at 183.346 kb on - strand, within CA265_RS00755 at 183.461 kb on - strand, within CA265_RS00755 at 183.508 kb on + strand, within CA265_RS00755 at 183.517 kb on + strand, within CA265_RS00755 at 183.631 kb on + strand, within CA265_RS00755 at 183.632 kb on - strand, within CA265_RS00755 at 183.686 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 180,670 + CA265_RS00745 0.50 +0.6 180,722 + CA265_RS00745 0.55 -0.1 180,732 + CA265_RS00745 0.55 +0.4 180,737 + CA265_RS00745 0.56 +0.0 180,738 - CA265_RS00745 0.56 +3.6 180,830 + CA265_RS00745 0.64 +0.5 180,830 + CA265_RS00745 0.64 -0.7 180,830 + CA265_RS00745 0.64 -0.3 180,831 - CA265_RS00745 0.64 +0.9 180,831 - CA265_RS00745 0.64 -1.0 180,836 + CA265_RS00745 0.64 +0.4 180,836 + CA265_RS00745 0.64 +0.2 180,837 - CA265_RS00745 0.64 +0.7 180,837 - CA265_RS00745 0.64 +0.5 180,839 - CA265_RS00745 0.64 -0.1 180,904 + CA265_RS00745 0.70 +0.7 180,907 - CA265_RS00745 0.70 +0.8 180,910 - CA265_RS00745 0.70 -0.0 180,940 - CA265_RS00745 0.73 +0.6 181,024 - CA265_RS00745 0.80 -0.7 181,037 + CA265_RS00745 0.81 +0.2 181,038 - CA265_RS00745 0.81 -0.8 181,092 - CA265_RS00745 0.86 -0.2 181,112 + CA265_RS00745 0.87 -0.9 181,112 + CA265_RS00745 0.87 +0.1 181,113 - CA265_RS00745 0.87 +0.8 181,146 + -0.3 181,157 - +0.3 181,157 - -0.2 181,259 + +0.9 181,260 - -0.6 181,462 + -0.5 181,507 + +0.3 181,508 - +0.2 181,807 + CA265_RS00750 0.16 -1.0 181,905 - CA265_RS00750 0.24 -0.0 182,007 - CA265_RS00750 0.33 -0.3 182,007 - CA265_RS00750 0.33 -1.4 182,098 + CA265_RS00750 0.40 +0.8 182,117 - CA265_RS00750 0.42 -0.5 182,121 - CA265_RS00750 0.42 +0.4 182,136 + CA265_RS00750 0.43 -0.8 182,252 - CA265_RS00750 0.53 +0.7 182,268 - CA265_RS00750 0.54 +0.6 182,299 - CA265_RS00750 0.56 +0.7 182,410 - CA265_RS00750 0.66 +0.3 182,422 + CA265_RS00750 0.67 -2.3 182,422 + CA265_RS00750 0.67 -2.2 182,451 + CA265_RS00750 0.69 -0.6 182,478 + CA265_RS00750 0.71 -0.9 182,483 + CA265_RS00750 0.71 -0.7 182,539 - CA265_RS00750 0.76 +0.7 182,585 + CA265_RS00750 0.80 -0.3 182,585 + CA265_RS00750 0.80 -0.9 182,590 + CA265_RS00750 0.80 +0.6 182,591 - CA265_RS00750 0.80 +0.6 182,592 + CA265_RS00750 0.80 +0.0 182,593 - CA265_RS00750 0.80 -0.3 182,674 - CA265_RS00750 0.87 -0.0 182,692 + CA265_RS00750 0.89 -0.4 182,692 + CA265_RS00750 0.89 +0.0 182,693 - CA265_RS00750 0.89 -0.3 182,693 - CA265_RS00750 0.89 +0.3 182,695 - CA265_RS00750 0.89 +0.1 182,695 - CA265_RS00750 0.89 -1.3 182,695 - CA265_RS00750 0.89 -0.2 182,696 + CA265_RS00750 0.89 -1.2 182,697 - CA265_RS00750 0.89 +0.6 182,717 - -1.2 182,817 - +0.8 182,827 - -0.6 182,830 - +0.2 182,838 + +0.0 182,839 - +1.1 182,841 + -1.7 182,846 - -0.4 182,853 - +0.8 182,962 + +0.2 182,963 - +0.4 183,036 + CA265_RS00755 0.14 +0.4 183,042 + CA265_RS00755 0.15 -0.1 183,060 - CA265_RS00755 0.17 -1.9 183,060 - CA265_RS00755 0.17 +0.3 183,061 + CA265_RS00755 0.17 -0.4 183,061 + CA265_RS00755 0.17 -0.2 183,061 + CA265_RS00755 0.17 -1.2 183,061 + CA265_RS00755 0.17 +0.5 183,062 - CA265_RS00755 0.17 +0.1 183,062 - CA265_RS00755 0.17 -0.4 183,062 - CA265_RS00755 0.17 +0.3 183,062 - CA265_RS00755 0.17 -0.5 183,062 - CA265_RS00755 0.17 -0.4 183,096 + CA265_RS00755 0.21 -2.0 183,160 + CA265_RS00755 0.29 -0.2 183,161 - CA265_RS00755 0.29 -0.6 183,163 + -0.5 183,181 + CA265_RS00755 0.31 -0.5 183,218 + CA265_RS00755 0.36 -0.1 183,219 - CA265_RS00755 0.36 +0.7 183,220 + CA265_RS00755 0.36 -1.7 183,275 - CA265_RS00755 0.42 +0.2 183,298 - CA265_RS00755 0.45 -0.1 183,299 + CA265_RS00755 0.45 -0.4 183,326 - CA265_RS00755 0.49 -1.3 183,326 - CA265_RS00755 0.49 +0.4 183,346 - CA265_RS00755 0.51 +1.4 183,461 - CA265_RS00755 0.65 +0.5 183,508 + CA265_RS00755 0.70 -0.9 183,517 + CA265_RS00755 0.71 -1.1 183,631 + CA265_RS00755 0.85 -0.3 183,632 - CA265_RS00755 0.85 +0.3 183,686 - -0.3
Or see this region's nucleotide sequence