Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16055 and AO356_16060 overlap by 4 nucleotides AO356_16060 and AO356_16065 are separated by 365 nucleotides AO356_16065 and AO356_16070 are separated by 3 nucleotides
AO356_16055: AO356_16055 - pantoate--beta-alanine ligase, at 3,631,277 to 3,632,137
_16055
AO356_16060: AO356_16060 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 3,632,134 to 3,632,934
_16060
AO356_16065: AO356_16065 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase, at 3,633,300 to 3,633,785
_16065
AO356_16070: AO356_16070 - poly(A) polymerase, at 3,633,789 to 3,635,186
_16070
Position (kb)
3632
3633 Strain fitness (log2 ratio)
-2
-1
0
1 at 3632.192 kb on + strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.487 kb on - strand, within AO356_16060 at 3632.487 kb on - strand, within AO356_16060 at 3632.500 kb on - strand, within AO356_16060 at 3632.500 kb on - strand, within AO356_16060 at 3632.500 kb on - strand, within AO356_16060 at 3632.667 kb on - strand, within AO356_16060 at 3632.735 kb on + strand, within AO356_16060 at 3632.736 kb on - strand, within AO356_16060 at 3632.736 kb on - strand, within AO356_16060 at 3632.736 kb on - strand, within AO356_16060 at 3632.862 kb on - strand at 3632.862 kb on - strand at 3632.862 kb on - strand at 3632.862 kb on - strand at 3632.862 kb on - strand at 3632.926 kb on - strand at 3632.926 kb on - strand at 3632.926 kb on - strand at 3632.926 kb on - strand at 3632.926 kb on - strand at 3632.926 kb on - strand at 3632.926 kb on - strand at 3632.949 kb on + strand at 3632.949 kb on + strand at 3632.991 kb on - strand at 3632.991 kb on - strand at 3632.991 kb on - strand at 3632.994 kb on + strand at 3632.994 kb on + strand at 3632.994 kb on + strand at 3632.994 kb on + strand at 3632.994 kb on + strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.996 kb on + strand at 3633.011 kb on + strand at 3633.011 kb on + strand at 3633.011 kb on + strand at 3633.012 kb on - strand at 3633.012 kb on - strand at 3633.012 kb on - strand at 3633.012 kb on - strand at 3633.012 kb on - strand at 3633.026 kb on + strand at 3633.026 kb on + strand at 3633.026 kb on + strand at 3633.026 kb on + strand at 3633.026 kb on + strand at 3633.026 kb on + strand at 3633.027 kb on - strand at 3633.027 kb on - strand at 3633.027 kb on - strand at 3633.048 kb on - strand at 3633.048 kb on - strand at 3633.048 kb on - strand at 3633.076 kb on + strand at 3633.076 kb on + strand at 3633.076 kb on + strand at 3633.076 kb on + strand at 3633.076 kb on + strand at 3633.077 kb on - strand at 3633.077 kb on - strand at 3633.077 kb on - strand at 3633.077 kb on - strand at 3633.077 kb on - strand at 3633.078 kb on + strand at 3633.078 kb on + strand at 3633.078 kb on + strand at 3633.079 kb on - strand at 3633.079 kb on - strand at 3633.079 kb on - strand at 3633.079 kb on - strand at 3633.079 kb on - strand at 3633.079 kb on - strand at 3633.156 kb on + strand at 3633.156 kb on + strand at 3633.156 kb on + strand at 3633.157 kb on - strand at 3633.157 kb on - strand at 3633.773 kb on - strand at 3633.777 kb on - strand at 3633.777 kb on - strand at 3633.777 kb on - strand at 3633.790 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 3,632,192 + +0.1 3,632,193 - -1.2 3,632,193 - -1.5 3,632,193 - -1.0 3,632,193 - -1.3 3,632,193 - +0.4 3,632,193 - -1.8 3,632,193 - +0.4 3,632,193 - -0.0 3,632,193 - -2.1 3,632,487 - AO356_16060 0.44 +0.1 3,632,487 - AO356_16060 0.44 -0.6 3,632,500 - AO356_16060 0.46 +1.0 3,632,500 - AO356_16060 0.46 -0.2 3,632,500 - AO356_16060 0.46 +0.3 3,632,667 - AO356_16060 0.67 +0.1 3,632,735 + AO356_16060 0.75 +0.6 3,632,736 - AO356_16060 0.75 -1.1 3,632,736 - AO356_16060 0.75 -0.5 3,632,736 - AO356_16060 0.75 -1.4 3,632,862 - +1.6 3,632,862 - -0.8 3,632,862 - -0.2 3,632,862 - +1.7 3,632,862 - +1.3 3,632,926 - -1.0 3,632,926 - -1.2 3,632,926 - -1.3 3,632,926 - -1.5 3,632,926 - -1.1 3,632,926 - -0.7 3,632,926 - +0.1 3,632,949 + -0.4 3,632,949 + +1.3 3,632,991 - +0.2 3,632,991 - -0.1 3,632,991 - -0.1 3,632,994 + -0.2 3,632,994 + -0.9 3,632,994 + -0.2 3,632,994 + -1.6 3,632,994 + +0.6 3,632,995 - +0.2 3,632,995 - +0.1 3,632,995 - +0.9 3,632,995 - -0.6 3,632,995 - +0.2 3,632,995 - +0.9 3,632,995 - +0.3 3,632,995 - +0.4 3,632,995 - +0.3 3,632,995 - +0.9 3,632,995 - -0.7 3,632,996 + -0.4 3,633,011 + +0.7 3,633,011 + -1.1 3,633,011 + +0.4 3,633,012 - -0.0 3,633,012 - +0.0 3,633,012 - -0.9 3,633,012 - -0.7 3,633,012 - -0.8 3,633,026 + +0.1 3,633,026 + -0.5 3,633,026 + -1.0 3,633,026 + -0.4 3,633,026 + -1.9 3,633,026 + +0.0 3,633,027 - -1.2 3,633,027 - +0.1 3,633,027 - -0.6 3,633,048 - +0.1 3,633,048 - -0.2 3,633,048 - +0.3 3,633,076 + +1.0 3,633,076 + -0.4 3,633,076 + +0.7 3,633,076 + -0.7 3,633,076 + +0.7 3,633,077 - +0.5 3,633,077 - +0.4 3,633,077 - +0.1 3,633,077 - +0.4 3,633,077 - -1.2 3,633,078 + +0.3 3,633,078 + -1.0 3,633,078 + -0.0 3,633,079 - -0.0 3,633,079 - +0.3 3,633,079 - -0.2 3,633,079 - +0.7 3,633,079 - +0.2 3,633,079 - -0.8 3,633,156 + -0.4 3,633,156 + -1.2 3,633,156 + -0.2 3,633,157 - -0.7 3,633,157 - +0.2 3,633,773 - -0.0 3,633,777 - -1.3 3,633,777 - -2.5 3,633,777 - -1.1 3,633,790 + -0.5
Or see this region's nucleotide sequence