Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_11565

Experiment: m-Inositol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_11555 and AO356_11560 are separated by 31 nucleotidesAO356_11560 and AO356_11565 are separated by 115 nucleotidesAO356_11565 and AO356_11570 are separated by 271 nucleotides AO356_11555: AO356_11555 - organic hydroperoxide resistance protein, at 2,618,506 to 2,618,925 _11555 AO356_11560: AO356_11560 - hypothetical protein, at 2,618,957 to 2,619,247 _11560 AO356_11565: AO356_11565 - oxidoreductase, at 2,619,363 to 2,620,151 _11565 AO356_11570: AO356_11570 - hypothetical protein, at 2,620,423 to 2,621,148 _11570 Position (kb) 2619 2620 2621Strain fitness (log2 ratio) -2 -1 0 1 2at 2618.518 kb on + strandat 2618.518 kb on + strandat 2618.518 kb on + strandat 2618.518 kb on + strandat 2618.518 kb on + strandat 2618.518 kb on + strandat 2618.519 kb on - strandat 2618.519 kb on - strandat 2618.519 kb on - strandat 2618.519 kb on - strandat 2618.519 kb on - strandat 2618.519 kb on - strandat 2618.519 kb on - strandat 2618.519 kb on - strandat 2618.923 kb on + strandat 2618.924 kb on - strandat 2618.936 kb on + strandat 2618.936 kb on + strandat 2618.936 kb on + strandat 2618.936 kb on + strandat 2618.936 kb on + strandat 2618.936 kb on + strandat 2618.936 kb on + strandat 2618.936 kb on + strandat 2618.936 kb on + strandat 2618.936 kb on + strandat 2618.936 kb on + strandat 2618.937 kb on - strandat 2618.937 kb on - strandat 2618.937 kb on - strandat 2618.937 kb on - strandat 2618.937 kb on - strandat 2618.937 kb on - strandat 2618.937 kb on - strandat 2618.937 kb on - strandat 2618.937 kb on - strandat 2618.937 kb on - strandat 2618.937 kb on - strandat 2618.937 kb on - strandat 2618.942 kb on + strandat 2618.942 kb on + strandat 2618.942 kb on + strandat 2618.942 kb on + strandat 2618.942 kb on + strandat 2618.942 kb on + strandat 2618.942 kb on + strandat 2618.942 kb on + strandat 2618.943 kb on - strandat 2618.943 kb on - strandat 2618.943 kb on - strandat 2618.943 kb on - strandat 2618.943 kb on - strandat 2618.943 kb on - strandat 2619.316 kb on + strandat 2619.316 kb on + strandat 2619.316 kb on + strandat 2619.316 kb on + strandat 2619.316 kb on + strandat 2619.317 kb on - strandat 2619.317 kb on - strandat 2619.317 kb on - strandat 2619.317 kb on - strandat 2619.317 kb on - strandat 2619.317 kb on - strandat 2619.317 kb on - strandat 2619.317 kb on - strandat 2619.356 kb on + strandat 2619.356 kb on + strandat 2619.356 kb on + strandat 2619.357 kb on - strandat 2619.364 kb on + strandat 2619.364 kb on + strandat 2619.364 kb on + strandat 2619.365 kb on - strandat 2619.374 kb on + strandat 2619.374 kb on + strandat 2619.374 kb on + strandat 2619.374 kb on + strandat 2619.374 kb on + strandat 2619.374 kb on + strandat 2619.375 kb on - strandat 2619.442 kb on + strand, within AO356_11565at 2619.442 kb on + strand, within AO356_11565at 2619.442 kb on + strand, within AO356_11565at 2619.443 kb on - strand, within AO356_11565at 2619.443 kb on - strand, within AO356_11565at 2619.443 kb on - strand, within AO356_11565at 2619.443 kb on - strand, within AO356_11565at 2619.443 kb on - strand, within AO356_11565at 2619.443 kb on - strand, within AO356_11565at 2619.443 kb on - strand, within AO356_11565at 2619.743 kb on + strand, within AO356_11565at 2619.743 kb on + strand, within AO356_11565at 2619.743 kb on + strand, within AO356_11565at 2619.743 kb on + strand, within AO356_11565at 2619.743 kb on + strand, within AO356_11565at 2619.744 kb on - strand, within AO356_11565at 2619.744 kb on - strand, within AO356_11565at 2619.744 kb on - strand, within AO356_11565at 2619.744 kb on - strand, within AO356_11565at 2619.787 kb on + strand, within AO356_11565at 2619.787 kb on + strand, within AO356_11565at 2619.787 kb on + strand, within AO356_11565at 2619.788 kb on - strand, within AO356_11565at 2620.050 kb on + strand, within AO356_11565at 2620.050 kb on + strand, within AO356_11565at 2620.050 kb on + strand, within AO356_11565at 2620.050 kb on + strand, within AO356_11565at 2620.050 kb on + strand, within AO356_11565at 2620.050 kb on + strand, within AO356_11565at 2620.050 kb on + strand, within AO356_11565at 2620.050 kb on + strand, within AO356_11565at 2620.050 kb on + strand, within AO356_11565at 2620.050 kb on + strand, within AO356_11565at 2620.050 kb on + strand, within AO356_11565at 2620.050 kb on + strand, within AO356_11565at 2620.051 kb on - strand, within AO356_11565at 2620.051 kb on - strand, within AO356_11565at 2620.051 kb on - strand, within AO356_11565at 2620.051 kb on - strand, within AO356_11565at 2620.051 kb on - strand, within AO356_11565at 2620.051 kb on - strand, within AO356_11565at 2620.051 kb on - strand, within AO356_11565at 2620.170 kb on - strandat 2620.192 kb on - strandat 2620.192 kb on - strandat 2620.222 kb on + strandat 2620.222 kb on + strandat 2620.222 kb on + strandat 2620.222 kb on + strandat 2620.222 kb on + strandat 2620.222 kb on + strandat 2620.222 kb on + strandat 2620.223 kb on - strandat 2620.223 kb on - strandat 2620.223 kb on - strandat 2620.223 kb on - strandat 2620.267 kb on + strandat 2620.267 kb on + strandat 2620.267 kb on + strandat 2620.267 kb on + strandat 2620.268 kb on - strandat 2620.268 kb on - strandat 2620.345 kb on - strandat 2620.412 kb on - strandat 2620.622 kb on + strand, within AO356_11570at 2620.635 kb on - strand, within AO356_11570at 2620.821 kb on - strand, within AO356_11570at 2620.821 kb on - strand, within AO356_11570at 2620.821 kb on - strand, within AO356_11570at 2620.922 kb on + strand, within AO356_11570at 2620.922 kb on + strand, within AO356_11570at 2620.923 kb on - strand, within AO356_11570at 2620.966 kb on - strand, within AO356_11570at 2620.966 kb on - strand, within AO356_11570at 2621.015 kb on + strand, within AO356_11570at 2621.015 kb on + strand, within AO356_11570at 2621.015 kb on + strand, within AO356_11570at 2621.015 kb on + strand, within AO356_11570at 2621.015 kb on + strand, within AO356_11570at 2621.015 kb on + strand, within AO356_11570at 2621.015 kb on + strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.050 kb on + strand, within AO356_11570at 2621.050 kb on + strand, within AO356_11570at 2621.050 kb on + strand, within AO356_11570at 2621.051 kb on - strand, within AO356_11570at 2621.051 kb on - strand, within AO356_11570at 2621.121 kb on + strandat 2621.121 kb on + strandat 2621.121 kb on + strandat 2621.121 kb on + strandat 2621.121 kb on + strandat 2621.122 kb on - strandat 2621.122 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m-Inositol (C)
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2,618,518 + -0.3
2,618,518 + -1.5
2,618,518 + -0.4
2,618,518 + -0.3
2,618,518 + +0.7
2,618,518 + +1.0
2,618,519 - -0.4
2,618,519 - -0.8
2,618,519 - -0.4
2,618,519 - -0.3
2,618,519 - -0.2
2,618,519 - -0.0
2,618,519 - -0.3
2,618,519 - +1.0
2,618,923 + -0.8
2,618,924 - +1.0
2,618,936 + -0.9
2,618,936 + -1.0
2,618,936 + +0.4
2,618,936 + -0.2
2,618,936 + +0.6
2,618,936 + +0.5
2,618,936 + +0.8
2,618,936 + +0.2
2,618,936 + -0.8
2,618,936 + -0.6
2,618,936 + +0.6
2,618,937 - +0.2
2,618,937 - -0.5
2,618,937 - +0.7
2,618,937 - +0.8
2,618,937 - +0.6
2,618,937 - -0.5
2,618,937 - +0.6
2,618,937 - -1.3
2,618,937 - -1.8
2,618,937 - -0.1
2,618,937 - +0.6
2,618,937 - +1.3
2,618,942 + +0.7
2,618,942 + +1.6
2,618,942 + -0.7
2,618,942 + -1.0
2,618,942 + +0.4
2,618,942 + -0.7
2,618,942 + -0.5
2,618,942 + +0.0
2,618,943 - -1.1
2,618,943 - +0.5
2,618,943 - -0.8
2,618,943 - -0.2
2,618,943 - +0.3
2,618,943 - -0.1
2,619,316 + -0.9
2,619,316 + +1.8
2,619,316 + -0.4
2,619,316 + -0.5
2,619,316 + +1.2
2,619,317 - +0.7
2,619,317 - +0.1
2,619,317 - -0.7
2,619,317 - +0.5
2,619,317 - -0.0
2,619,317 - -0.3
2,619,317 - -0.4
2,619,317 - +0.1
2,619,356 + +0.4
2,619,356 + -0.5
2,619,356 + -0.2
2,619,357 - -0.1
2,619,364 + +0.1
2,619,364 + +0.0
2,619,364 + +0.2
2,619,365 - +0.6
2,619,374 + +1.2
2,619,374 + +0.4
2,619,374 + -1.0
2,619,374 + -0.0
2,619,374 + +0.6
2,619,374 + +0.2
2,619,375 - +0.6
2,619,442 + AO356_11565 0.10 -1.9
2,619,442 + AO356_11565 0.10 +0.2
2,619,442 + AO356_11565 0.10 +0.1
2,619,443 - AO356_11565 0.10 +0.6
2,619,443 - AO356_11565 0.10 +0.2
2,619,443 - AO356_11565 0.10 +0.7
2,619,443 - AO356_11565 0.10 +1.1
2,619,443 - AO356_11565 0.10 +0.7
2,619,443 - AO356_11565 0.10 +0.3
2,619,443 - AO356_11565 0.10 +0.3
2,619,743 + AO356_11565 0.48 -1.0
2,619,743 + AO356_11565 0.48 +0.8
2,619,743 + AO356_11565 0.48 -0.6
2,619,743 + AO356_11565 0.48 +0.5
2,619,743 + AO356_11565 0.48 +0.0
2,619,744 - AO356_11565 0.48 -0.2
2,619,744 - AO356_11565 0.48 -0.9
2,619,744 - AO356_11565 0.48 +1.0
2,619,744 - AO356_11565 0.48 -0.2
2,619,787 + AO356_11565 0.54 -0.2
2,619,787 + AO356_11565 0.54 +0.6
2,619,787 + AO356_11565 0.54 -0.1
2,619,788 - AO356_11565 0.54 +0.1
2,620,050 + AO356_11565 0.87 +1.6
2,620,050 + AO356_11565 0.87 -0.0
2,620,050 + AO356_11565 0.87 +0.2
2,620,050 + AO356_11565 0.87 +0.2
2,620,050 + AO356_11565 0.87 -0.9
2,620,050 + AO356_11565 0.87 -0.3
2,620,050 + AO356_11565 0.87 +0.3
2,620,050 + AO356_11565 0.87 +0.4
2,620,050 + AO356_11565 0.87 +0.2
2,620,050 + AO356_11565 0.87 -0.9
2,620,050 + AO356_11565 0.87 -0.2
2,620,050 + AO356_11565 0.87 -0.2
2,620,051 - AO356_11565 0.87 +0.9
2,620,051 - AO356_11565 0.87 +1.6
2,620,051 - AO356_11565 0.87 +0.0
2,620,051 - AO356_11565 0.87 +1.0
2,620,051 - AO356_11565 0.87 +0.5
2,620,051 - AO356_11565 0.87 +0.3
2,620,051 - AO356_11565 0.87 +0.5
2,620,170 - +0.1
2,620,192 - +0.4
2,620,192 - +0.5
2,620,222 + +0.3
2,620,222 + -0.1
2,620,222 + +0.7
2,620,222 + +0.2
2,620,222 + +0.4
2,620,222 + +0.6
2,620,222 + +0.4
2,620,223 - -1.2
2,620,223 - +0.3
2,620,223 - +0.5
2,620,223 - +0.0
2,620,267 + -0.3
2,620,267 + +0.2
2,620,267 + +0.2
2,620,267 + +0.3
2,620,268 - -0.4
2,620,268 - +0.5
2,620,345 - +1.3
2,620,412 - +0.3
2,620,622 + AO356_11570 0.27 +0.8
2,620,635 - AO356_11570 0.29 +0.1
2,620,821 - AO356_11570 0.55 -0.6
2,620,821 - AO356_11570 0.55 -0.6
2,620,821 - AO356_11570 0.55 +0.0
2,620,922 + AO356_11570 0.69 +0.9
2,620,922 + AO356_11570 0.69 -0.5
2,620,923 - AO356_11570 0.69 +0.4
2,620,966 - AO356_11570 0.75 +0.5
2,620,966 - AO356_11570 0.75 +0.1
2,621,015 + AO356_11570 0.82 +0.6
2,621,015 + AO356_11570 0.82 -0.3
2,621,015 + AO356_11570 0.82 +0.3
2,621,015 + AO356_11570 0.82 -0.3
2,621,015 + AO356_11570 0.82 +0.9
2,621,015 + AO356_11570 0.82 -0.0
2,621,015 + AO356_11570 0.82 -1.1
2,621,016 - AO356_11570 0.82 -0.3
2,621,016 - AO356_11570 0.82 -0.2
2,621,016 - AO356_11570 0.82 -0.8
2,621,016 - AO356_11570 0.82 +0.2
2,621,016 - AO356_11570 0.82 +0.3
2,621,016 - AO356_11570 0.82 -0.4
2,621,016 - AO356_11570 0.82 -0.5
2,621,016 - AO356_11570 0.82 -0.1
2,621,016 - AO356_11570 0.82 +0.0
2,621,016 - AO356_11570 0.82 +0.4
2,621,016 - AO356_11570 0.82 +0.2
2,621,016 - AO356_11570 0.82 +0.6
2,621,016 - AO356_11570 0.82 +0.4
2,621,050 + AO356_11570 0.86 +0.5
2,621,050 + AO356_11570 0.86 -0.2
2,621,050 + AO356_11570 0.86 +0.3
2,621,051 - AO356_11570 0.87 +0.1
2,621,051 - AO356_11570 0.87 -1.0
2,621,121 + -1.1
2,621,121 + -0.7
2,621,121 + +0.2
2,621,121 + +0.2
2,621,121 + +0.4
2,621,122 - -2.3
2,621,122 - +0.3

Or see this region's nucleotide sequence