Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4433

Experiment: epiphytic; Green bean

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	epiphytic; Green bean
5,300,382	+				+0.1
5,300,382	+				+1.1
5,300,383	-				-1.9
5,300,383	-				+1.5
5,300,394	+				-1.3
5,300,394	+				-0.4
5,300,394	+				+0.3
5,300,394	+				-2.8
5,300,394	+				+1.5
5,300,394	+				+1.5
5,300,395	-				-0.5
5,300,395	-				-0.2
5,300,395	-				-0.1
5,300,425	+				-0.9
5,300,425	+				+0.9
5,300,425	+				+2.7
5,300,426	-				+1.2
5,300,426	-				-0.6
5,300,429	+				+0.5
5,300,429	+				-0.1
5,300,429	+				+5.1
5,300,429	+				-1.1
5,300,429	+				-0.2
5,300,429	+				+0.1
5,300,429	+				-1.0
5,300,429	+				+0.1
5,300,429	+				+1.2
5,300,429	+				+0.2
5,300,429	+				-0.8
5,300,429	+				-1.1
5,300,429	+				+0.8
5,300,429	+				+0.1
5,300,429	+				-1.6
5,300,429	+				+2.2
5,300,429	+				-0.2
5,300,429	+				+5.0
5,300,429	+				+0.6
5,300,429	+				-0.1
5,300,430	-				+1.0
5,300,430	-				-1.5
5,300,430	-				-1.4
5,300,430	-				-0.1
5,300,430	-				+0.3
5,300,430	-				+0.1
5,300,430	-				+0.5
5,300,430	-				-0.4
5,300,430	-				+0.5
5,300,430	-				-1.5
5,300,430	-				-0.4
5,300,430	-				-0.7
5,300,430	-				-0.2
5,300,430	-				+2.1
5,300,430	-				+0.5
5,300,430	-				-0.7
5,300,430	-				+0.7
5,300,516	-				-1.2
5,300,537	+				-1.1
5,300,537	+				-0.1
5,300,538	-				-0.9
5,300,600	+				-1.3
5,300,600	+				-1.7
5,300,600	+				+1.5
5,300,600	+				+1.3
5,300,600	+				+1.3
5,300,600	+				-0.8
5,300,600	+				-1.1
5,300,600	+				-0.1
5,300,600	+				-0.9
5,300,600	+				+0.3
5,300,600	+				-0.1
5,300,600	+				+1.5
5,300,601	-				-1.2
5,300,601	-				-0.9
5,300,601	-				+0.9
5,300,601	-				-1.1
5,300,601	-				-0.9
5,300,601	-				-0.9
5,300,601	-				-0.1
5,300,601	-				+0.2
5,300,601	-				-1.7
5,300,601	-				-0.6
5,300,601	-				+0.5
5,300,601	-				-3.2
5,300,601	-				+0.2
5,300,601	-				-0.2
5,300,601	-				-0.5
5,300,602	+				+0.3
5,300,602	+				+0.1
5,300,602	+				-3.0
5,300,602	+				-0.1
5,300,602	+				-0.9
5,300,602	+				-0.6
5,300,602	+				-1.1
5,300,602	+				-1.0
5,300,602	+				-2.9
5,300,602	+				-0.8
5,300,602	+				-0.8
5,300,602	+				-1.5
5,300,602	+				-1.1
5,300,602	+				+0.2
5,300,602	+				+0.5
5,300,602	+				-1.0
5,300,602	+				-1.6
5,300,602	+				+0.1
5,300,602	+				-1.3
5,300,602	+				+1.2
5,300,602	+				+0.7
5,300,602	+				+0.7
5,300,602	+				-0.1
5,300,602	+				-2.1
5,300,602	+				-0.4
5,300,602	+				+1.3
5,300,602	+				-1.5
5,300,602	+				-0.0
5,300,603	-				-0.8
5,300,603	-				-0.5
5,300,603	-				+0.1
5,300,603	-				-1.9
5,300,603	-				-0.4
5,300,603	-				+0.5
5,300,603	-				-0.0
5,300,603	-				-0.5
5,300,603	-				-0.6
5,300,603	-				-0.1
5,300,603	-				-0.9
5,300,603	-				+1.5
5,300,603	-				-0.2
5,300,603	-				+0.1
5,300,603	-				-1.4
5,300,603	-				-1.6
5,300,603	-				+0.2
5,300,603	-				-2.7
5,300,603	-				-1.5
5,300,603	-				+0.5
5,300,603	-				-2.3
5,300,603	-				+0.3
5,300,603	-				+0.5
5,300,603	-				+0.9
5,300,603	-				+1.7
5,300,603	-				+0.1
5,300,603	-				-0.4
5,300,606	+				+1.9
5,300,606	+				-0.1
5,300,607	-				-0.1
5,300,607	-				+0.2
5,300,607	-				+0.8
5,300,778	+		Psyr_4432	0.37	+0.7
5,300,778	+		Psyr_4432	0.37	-0.3
5,300,778	+		Psyr_4432	0.37	-0.3
5,300,778	+		Psyr_4432	0.37	+0.7
5,300,778	+		Psyr_4432	0.37	+1.7
5,300,778	+		Psyr_4432	0.37	-0.5
5,300,778	+		Psyr_4432	0.37	+1.5
5,300,778	+		Psyr_4432	0.37	+0.0
5,300,778	+		Psyr_4432	0.37	-1.3
5,300,778	+		Psyr_4432	0.37	-1.0
5,300,778	+		Psyr_4432	0.37	-1.5
5,300,778	+		Psyr_4432	0.37	+0.1
5,300,779	-		Psyr_4432	0.37	+0.7
5,300,779	-		Psyr_4432	0.37	-1.1
5,300,779	-		Psyr_4432	0.37	-0.7
5,300,779	-		Psyr_4432	0.37	-1.3
5,300,779	-		Psyr_4432	0.37	+0.6
5,300,779	-		Psyr_4432	0.37	-1.3
5,300,779	-		Psyr_4432	0.37	-0.4
5,300,779	-		Psyr_4432	0.37	-1.1
5,300,883	-		Psyr_4432	0.71	+0.5
5,301,037	+		Psyr_4433	0.10	+0.8
5,301,037	+		Psyr_4433	0.10	+1.4
5,301,037	+		Psyr_4433	0.10	-0.6
5,301,037	+		Psyr_4433	0.10	+0.4
5,301,037	+		Psyr_4433	0.10	-2.0
5,301,037	+		Psyr_4433	0.10	-2.2
5,301,037	+		Psyr_4433	0.10	+1.3
5,301,038	-		Psyr_4433	0.10	+0.1
5,301,038	-		Psyr_4433	0.10	+0.0
5,301,038	-		Psyr_4433	0.10	+0.7
5,301,038	-		Psyr_4433	0.10	-0.5
5,301,038	-		Psyr_4433	0.10	+2.9
5,301,038	-		Psyr_4433	0.10	+0.1
5,301,038	-		Psyr_4433	0.10	-0.0
5,301,038	-		Psyr_4433	0.10	-0.9
5,301,038	-		Psyr_4433	0.10	+0.8
5,301,038	-		Psyr_4433	0.10	-0.6
5,301,038	-		Psyr_4433	0.10	-0.9
5,301,038	-		Psyr_4433	0.10	-0.9
5,301,038	-		Psyr_4433	0.10	+0.1
5,301,113	-		Psyr_4433	0.24	-0.5
5,301,225	+		Psyr_4433	0.44	-0.5
5,301,244	+		Psyr_4433	0.47	+0.5
5,301,244	+		Psyr_4433	0.47	-1.7
5,301,244	+		Psyr_4433	0.47	-1.4
5,301,244	+		Psyr_4433	0.47	+0.5
5,301,244	+		Psyr_4433	0.47	-1.3
5,301,244	+		Psyr_4433	0.47	-1.1
5,301,245	-		Psyr_4433	0.47	-1.1
5,301,245	-		Psyr_4433	0.47	-0.9
5,301,245	-		Psyr_4433	0.47	-0.5
5,301,245	-		Psyr_4433	0.47	-0.5
5,301,245	-		Psyr_4433	0.47	-2.0
5,301,245	-		Psyr_4433	0.47	-2.2
5,301,535	+				+0.2
5,301,686	+		Psyr_4434	0.26	-0.5
5,301,686	+		Psyr_4434	0.26	-0.1
5,301,687	-		Psyr_4434	0.26	-1.7
5,301,687	-		Psyr_4434	0.26	-2.1
5,301,969	-		Psyr_4434	0.79	+0.3
5,301,969	-		Psyr_4434	0.79	-0.2
5,301,969	-		Psyr_4434	0.79	-0.0
5,301,969	-		Psyr_4434	0.79	-1.5
5,301,983	+		Psyr_4434	0.81	+0.2
5,301,984	-		Psyr_4434	0.82	+0.0
5,301,984	-		Psyr_4434	0.82	-0.1
5,302,011	-		Psyr_4434	0.87	+0.7
5,302,053	-				-1.7
5,302,053	-				+0.2
5,302,381	+				+0.3
5,302,381	+				-0.9
5,302,381	+				-0.1
5,302,382	-				-0.5
5,302,382	-				-0.4
5,302,428	+				+1.4
5,302,429	-				+0.8
5,302,429	-				+0.2
5,302,429	-				+0.2
5,302,429	-				-1.9
5,302,429	-				+0.5
5,302,429	-				-0.5
5,302,476	+				-0.3
5,302,476	+				+1.1
5,302,476	+				-1.7
5,302,476	+				-0.5
5,302,476	+				-1.5
5,302,476	+				-1.4
5,302,476	+				+0.7
5,302,476	+				+0.7
5,302,476	+				+1.0
5,302,476	+				+0.8
5,302,476	+				-0.3
5,302,476	+				+1.1
5,302,476	+				-0.8
5,302,477	-				-1.9
5,302,477	-				+0.1
5,302,477	-				-0.1
5,302,516	+				-0.4
5,302,531	+				-1.1
5,302,532	-				-0.5
5,302,532	-				-0.1
5,302,532	-				-0.0