Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4249

Experiment: epiphytic; Green bean

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	epiphytic; Green bean
5,065,590	+		Psyr_4248	0.89	+0.7
5,065,590	+		Psyr_4248	0.89	+0.4
5,065,590	+		Psyr_4248	0.89	-0.7
5,065,591	-		Psyr_4248	0.89	+0.8
5,065,591	-		Psyr_4248	0.89	+0.4
5,065,591	-		Psyr_4248	0.89	-0.4
5,065,591	-		Psyr_4248	0.89	+0.9
5,065,591	-		Psyr_4248	0.89	-2.1
5,065,591	-		Psyr_4248	0.89	-0.4
5,065,591	-		Psyr_4248	0.89	+0.3
5,065,591	-		Psyr_4248	0.89	-0.3
5,065,592	+		Psyr_4248	0.89	-1.2
5,065,592	+		Psyr_4248	0.89	+1.5
5,065,592	+		Psyr_4248	0.89	+0.7
5,065,593	-		Psyr_4248	0.89	-0.6
5,065,593	-		Psyr_4248	0.89	+3.0
5,065,593	-		Psyr_4248	0.89	-1.0
5,065,625	+				+0.3
5,065,625	+				+2.1
5,065,625	+				+0.6
5,065,625	+				+0.6
5,065,625	+				-1.1
5,065,625	+				-1.6
5,065,626	-				+1.2
5,065,626	-				+1.2
5,065,626	-				+0.9
5,065,626	-				+1.4
5,065,649	+				+1.2
5,065,649	+				-0.4
5,065,649	+				+0.7
5,065,650	-				+2.2
5,065,679	+				+0.8
5,065,679	+				+2.7
5,065,680	-				+0.9
5,065,680	-				-0.2
5,065,682	+				-1.9
5,065,682	+				+0.1
5,065,683	-				-1.0
5,065,744	+				+2.1
5,065,744	+				-0.5
5,065,744	+				-1.6
5,065,745	-				+1.3
5,065,745	-				+1.7
5,065,745	-				+0.4
5,065,784	+				-2.1
5,065,784	+				+0.5
5,065,784	+				+0.4
5,065,784	+				-2.0
5,065,784	+				-1.4
5,065,784	+				-0.7
5,065,785	-				-0.0
5,065,785	-				+1.3
5,065,785	-				+1.1
5,065,785	-				-1.3
5,065,785	-				-1.7
5,065,785	-				+1.1
5,065,785	-				+0.7
5,065,785	-				+1.4
5,065,865	+				-0.4
5,066,063	+				+0.4
5,066,063	+				-0.6
5,066,063	+				-0.4
5,066,064	-				+1.4
5,066,064	-				-1.8
5,066,068	+				-0.9
5,066,068	+				-0.9
5,066,068	+				-0.9
5,066,069	-				-0.5
5,066,069	-				+0.4
5,066,069	-				-1.1
5,066,069	-				-1.3
5,066,069	-				-2.0
5,066,151	+				-0.3
5,066,152	-				-0.1
5,066,177	+				+0.1
5,066,177	+				-0.6
5,066,178	-				-2.1
5,066,201	+				+1.5
5,066,242	-				-1.0
5,066,297	-				+2.6
5,066,301	+				+0.3
5,066,377	+				-0.4
5,066,389	+				-1.4
5,066,389	+				+0.8
5,066,389	+				-3.7
5,066,390	-				+2.2
5,066,390	-				+0.9
5,066,390	-				-0.0
5,066,390	-				-0.3
5,066,390	-				-0.3
5,066,390	-				-0.1
5,066,390	-				+0.2
5,066,475	+				-0.3
5,066,475	+				+0.5
5,066,475	+				-0.5
5,066,475	+				+0.9
5,066,475	+				-1.4
5,066,475	+				-0.5
5,066,475	+				+0.1
5,066,476	-				+0.3
5,066,476	-				-0.0
5,066,476	-				+0.2
5,066,476	-				+0.4
5,066,476	-				-1.5
5,066,476	-				-0.2
5,066,476	-				-3.4
5,066,476	-				-1.9
5,066,505	-				+0.9
5,066,553	+				+2.0
5,066,637	-				-0.7
5,066,674	+		Psyr_4249	0.10	+0.3
5,066,674	+		Psyr_4249	0.10	+5.5
5,066,674	+		Psyr_4249	0.10	+0.6
5,066,674	+		Psyr_4249	0.10	+2.4
5,066,674	+		Psyr_4249	0.10	+1.7
5,066,674	+		Psyr_4249	0.10	+2.7
5,066,674	+		Psyr_4249	0.10	+0.7
5,066,675	-		Psyr_4249	0.10	+0.6
5,066,675	-		Psyr_4249	0.10	+1.4
5,066,675	-		Psyr_4249	0.10	+0.2
5,066,675	-		Psyr_4249	0.10	-0.1
5,066,675	-		Psyr_4249	0.10	+1.5
5,066,675	-		Psyr_4249	0.10	-0.7
5,066,675	-		Psyr_4249	0.10	+0.4
5,066,720	+		Psyr_4249	0.14	+1.2
5,066,720	+		Psyr_4249	0.14	-0.6
5,066,720	+		Psyr_4249	0.14	+0.4
5,066,720	+		Psyr_4249	0.14	-0.3
5,066,721	-		Psyr_4249	0.14	-0.7
5,066,721	-		Psyr_4249	0.14	-0.2
5,066,721	-		Psyr_4249	0.14	+0.6
5,066,721	-		Psyr_4249	0.14	+0.4
5,066,721	-		Psyr_4249	0.14	+0.2
5,066,721	-		Psyr_4249	0.14	-1.8
5,066,834	+		Psyr_4249	0.24	+0.3
5,066,834	+		Psyr_4249	0.24	+2.3
5,066,834	+		Psyr_4249	0.24	+2.7
5,066,834	+		Psyr_4249	0.24	-0.7
5,066,873	+		Psyr_4249	0.27	+1.4
5,066,874	-		Psyr_4249	0.27	-0.4
5,066,874	-		Psyr_4249	0.27	-0.4
5,066,874	-		Psyr_4249	0.27	+0.7
5,066,874	-		Psyr_4249	0.27	+1.4
5,067,329	+		Psyr_4249	0.66	-0.8
5,067,830	+		Psyr_4250	0.17	+0.4
5,067,831	-		Psyr_4250	0.17	+2.3
5,067,831	-		Psyr_4250	0.17	-0.1
5,067,831	-		Psyr_4250	0.17	-2.0
5,067,861	+		Psyr_4250	0.22	-0.7
5,067,862	-		Psyr_4250	0.22	-0.5
5,067,862	-		Psyr_4250	0.22	+0.2
5,068,039	-		Psyr_4250	0.49	-0.6
5,068,057	+		Psyr_4250	0.52	+0.5
5,068,057	+		Psyr_4250	0.52	+0.2
5,068,057	+		Psyr_4250	0.52	+0.4
5,068,057	+		Psyr_4250	0.52	+3.9
5,068,057	+		Psyr_4250	0.52	+1.0
5,068,057	+		Psyr_4250	0.52	-1.9
5,068,057	+		Psyr_4250	0.52	-0.9
5,068,057	+		Psyr_4250	0.52	-0.5
5,068,057	+		Psyr_4250	0.52	-0.6
5,068,057	+		Psyr_4250	0.52	-2.6
5,068,058	-		Psyr_4250	0.52	-0.9
5,068,058	-		Psyr_4250	0.52	-0.9
5,068,058	-		Psyr_4250	0.52	+1.6
5,068,058	-		Psyr_4250	0.52	+1.7
5,068,058	-		Psyr_4250	0.52	-0.6
5,068,058	-		Psyr_4250	0.52	-0.7
5,068,087	+		Psyr_4250	0.56	-0.8
5,068,088	-		Psyr_4250	0.56	+0.8
5,068,144	+		Psyr_4250	0.65	-0.2
5,068,144	+		Psyr_4250	0.65	-0.9
5,068,144	+		Psyr_4250	0.65	+0.3
5,068,145	-		Psyr_4250	0.65	-0.1
5,068,145	-		Psyr_4250	0.65	+0.4
5,068,145	-		Psyr_4250	0.65	+0.7
5,068,373	+				+0.3
5,068,388	+				-0.1
5,068,388	+				+0.0
5,068,388	+				+0.4
5,068,388	+				+0.3
5,068,389	-				-0.2
5,068,389	-				-0.6
5,068,544	+		Psyr_4251	0.18	+1.0
5,068,544	+		Psyr_4251	0.18	-0.4
5,068,544	+		Psyr_4251	0.18	+0.3
5,068,544	+		Psyr_4251	0.18	-1.0
5,068,545	-		Psyr_4251	0.18	+0.0
5,068,574	+		Psyr_4251	0.21	-2.0
5,068,574	+		Psyr_4251	0.21	+0.8
5,068,586	+		Psyr_4251	0.22	+0.4
5,068,586	+		Psyr_4251	0.22	-0.5
5,068,586	+		Psyr_4251	0.22	+1.4
5,068,586	+		Psyr_4251	0.22	+0.3
5,068,586	+		Psyr_4251	0.22	-0.1
5,068,587	-		Psyr_4251	0.22	-1.0
5,068,587	-		Psyr_4251	0.22	-1.0
5,068,587	-		Psyr_4251	0.22	+0.1
5,068,587	-		Psyr_4251	0.22	-1.7
5,068,587	-		Psyr_4251	0.22	-1.9
5,068,587	-		Psyr_4251	0.22	+0.6
5,068,587	-		Psyr_4251	0.22	+0.0
5,068,587	-		Psyr_4251	0.22	-0.5
5,068,587	-		Psyr_4251	0.22	-2.5
5,068,646	+		Psyr_4251	0.29	+3.7
5,068,646	+		Psyr_4251	0.29	-0.6
5,068,647	-		Psyr_4251	0.29	-0.4
5,068,647	-		Psyr_4251	0.29	+1.0
5,068,647	-		Psyr_4251	0.29	+1.4
5,068,647	-		Psyr_4251	0.29	-0.1
5,068,647	-		Psyr_4251	0.29	-1.9
5,068,688	+		Psyr_4251	0.34	+3.0
5,068,688	+		Psyr_4251	0.34	+0.6
5,068,688	+		Psyr_4251	0.34	-0.1
5,068,689	-		Psyr_4251	0.34	-1.0
5,068,689	-		Psyr_4251	0.34	-1.0