Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4226

Experiment: epiphytic; Green bean

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	epiphytic; Green bean
5,031,906	+		Psyr_4225	0.38	+0.4
5,031,906	+		Psyr_4225	0.38	+0.3
5,031,906	+		Psyr_4225	0.38	-1.8
5,031,906	+		Psyr_4225	0.38	+0.7
5,031,906	+		Psyr_4225	0.38	+0.1
5,031,906	+		Psyr_4225	0.38	-0.2
5,031,906	+		Psyr_4225	0.38	-0.5
5,031,907	-		Psyr_4225	0.38	-0.2
5,031,907	-		Psyr_4225	0.38	-0.2
5,031,907	-		Psyr_4225	0.38	-0.8
5,031,907	-		Psyr_4225	0.38	+0.4
5,031,907	-		Psyr_4225	0.38	+1.8
5,032,170	+		Psyr_4225	0.55	-0.4
5,032,173	-		Psyr_4225	0.55	-1.2
5,032,173	-		Psyr_4225	0.55	+0.4
5,032,173	-		Psyr_4225	0.55	+0.0
5,032,297	+		Psyr_4225	0.63	-1.0
5,032,297	+		Psyr_4225	0.63	-0.9
5,032,298	-		Psyr_4225	0.63	-0.4
5,032,298	-		Psyr_4225	0.63	-0.3
5,032,298	-		Psyr_4225	0.63	+0.7
5,032,301	+		Psyr_4225	0.63	-0.3
5,032,301	+		Psyr_4225	0.63	+1.3
5,032,301	+		Psyr_4225	0.63	-1.4
5,032,301	+		Psyr_4225	0.63	-1.1
5,032,302	-		Psyr_4225	0.63	-0.5
5,032,306	+		Psyr_4225	0.63	-0.2
5,032,320	+		Psyr_4225	0.64	+0.2
5,032,320	+		Psyr_4225	0.64	+0.2
5,032,320	+		Psyr_4225	0.64	+0.8
5,032,320	+		Psyr_4225	0.64	-2.7
5,032,320	+		Psyr_4225	0.64	-0.4
5,032,320	+		Psyr_4225	0.64	-0.6
5,032,320	+		Psyr_4225	0.64	+0.6
5,032,320	+		Psyr_4225	0.64	-0.7
5,032,320	+		Psyr_4225	0.64	-1.2
5,032,320	+		Psyr_4225	0.64	+0.8
5,032,320	+		Psyr_4225	0.64	+1.0
5,032,320	+		Psyr_4225	0.64	-0.6
5,032,320	+		Psyr_4225	0.64	-0.4
5,032,320	+		Psyr_4225	0.64	-0.9
5,032,320	+		Psyr_4225	0.64	+0.9
5,032,320	+		Psyr_4225	0.64	-0.6
5,032,320	+		Psyr_4225	0.64	+0.8
5,032,320	+		Psyr_4225	0.64	+0.6
5,032,320	+		Psyr_4225	0.64	-0.6
5,032,320	+		Psyr_4225	0.64	+0.4
5,032,320	+		Psyr_4225	0.64	+1.6
5,032,320	+		Psyr_4225	0.64	+0.4
5,032,320	+		Psyr_4225	0.64	+0.8
5,032,320	+		Psyr_4225	0.64	+1.6
5,032,320	+		Psyr_4225	0.64	-1.6
5,032,320	+		Psyr_4225	0.64	+1.4
5,032,321	-		Psyr_4225	0.64	+0.2
5,032,321	-		Psyr_4225	0.64	+0.5
5,032,321	-		Psyr_4225	0.64	+0.8
5,032,321	-		Psyr_4225	0.64	-2.0
5,032,321	-		Psyr_4225	0.64	+1.0
5,032,321	-		Psyr_4225	0.64	-0.9
5,032,321	-		Psyr_4225	0.64	+1.4
5,032,321	-		Psyr_4225	0.64	-0.8
5,032,321	-		Psyr_4225	0.64	-0.1
5,032,321	-		Psyr_4225	0.64	-0.5
5,032,321	-		Psyr_4225	0.64	+0.5
5,032,321	-		Psyr_4225	0.64	-1.4
5,032,321	-		Psyr_4225	0.64	+1.0
5,032,321	-		Psyr_4225	0.64	+0.0
5,032,321	-		Psyr_4225	0.64	-0.2
5,032,321	-		Psyr_4225	0.64	+0.3
5,032,321	-		Psyr_4225	0.64	+1.4
5,032,321	-		Psyr_4225	0.64	-2.4
5,032,321	-		Psyr_4225	0.64	+1.2
5,032,321	-		Psyr_4225	0.64	+1.1
5,032,321	-		Psyr_4225	0.64	-0.9
5,032,395	+		Psyr_4225	0.69	+0.5
5,032,474	+		Psyr_4225	0.74	-0.7
5,032,533	+		Psyr_4225	0.78	-0.7
5,032,681	-		Psyr_4225	0.87	-1.4
5,032,727	-				+0.4
5,032,727	-				+1.4
5,032,727	-				-1.2
5,032,842	+				+2.2
5,032,842	+				+2.7
5,032,842	+				+1.0
5,032,842	+				-0.2
5,032,842	+				-0.3
5,032,842	+				-2.3
5,032,842	+				-0.1
5,032,842	+				-1.4
5,032,843	-				+1.1
5,032,843	-				-0.1
5,032,843	-				-0.0
5,032,843	-				+0.0
5,032,843	-				+0.2
5,032,843	-				+0.3
5,032,843	-				+1.0
5,032,843	-				-0.6
5,032,843	-				-0.9
5,032,843	-				+1.5
5,032,993	+				-0.8
5,033,071	+		Psyr_4226	0.13	-0.4
5,033,071	+		Psyr_4226	0.13	-0.5
5,033,072	-		Psyr_4226	0.13	-1.2
5,033,072	-		Psyr_4226	0.13	+0.5
5,033,072	-		Psyr_4226	0.13	+0.0
5,033,108	+		Psyr_4226	0.16	-0.7
5,033,254	+		Psyr_4226	0.26	-2.3
5,033,254	+		Psyr_4226	0.26	+0.9
5,033,254	+		Psyr_4226	0.26	-0.6
5,033,254	+		Psyr_4226	0.26	-0.5
5,033,254	+		Psyr_4226	0.26	+1.0
5,033,254	+		Psyr_4226	0.26	-0.9
5,033,254	+		Psyr_4226	0.26	+0.7
5,033,254	+		Psyr_4226	0.26	+0.7
5,033,254	+		Psyr_4226	0.26	-0.2
5,033,255	-		Psyr_4226	0.27	+0.4
5,033,255	-		Psyr_4226	0.27	+2.2
5,033,255	-		Psyr_4226	0.27	-0.3
5,033,255	-		Psyr_4226	0.27	+0.5
5,033,347	+		Psyr_4226	0.33	-0.6
5,033,347	+		Psyr_4226	0.33	+0.7
5,033,348	-		Psyr_4226	0.33	-1.0
5,033,455	+		Psyr_4226	0.41	-1.2
5,033,455	+		Psyr_4226	0.41	+0.7
5,033,456	-		Psyr_4226	0.41	+1.4
5,033,456	-		Psyr_4226	0.41	-0.5
5,033,482	+		Psyr_4226	0.43	+0.3
5,033,482	+		Psyr_4226	0.43	-0.5
5,033,482	+		Psyr_4226	0.43	-0.7
5,033,483	-		Psyr_4226	0.43	+2.7
5,033,483	-		Psyr_4226	0.43	-0.9
5,033,483	-		Psyr_4226	0.43	+0.6
5,033,483	-		Psyr_4226	0.43	-0.2
5,033,483	-		Psyr_4226	0.43	+0.8
5,033,504	-		Psyr_4226	0.45	-3.3
5,033,515	+		Psyr_4226	0.45	-0.1
5,033,515	+		Psyr_4226	0.45	+0.8
5,033,515	+		Psyr_4226	0.45	+0.6
5,033,515	+		Psyr_4226	0.45	-0.2
5,033,516	-		Psyr_4226	0.45	+0.4
5,033,516	-		Psyr_4226	0.45	-0.5
5,033,516	-		Psyr_4226	0.45	-0.2
5,033,516	-		Psyr_4226	0.45	+0.6
5,033,516	-		Psyr_4226	0.45	-2.6
5,033,519	+		Psyr_4226	0.46	+0.5
5,033,519	+		Psyr_4226	0.46	+0.0
5,033,520	-		Psyr_4226	0.46	-1.4
5,033,531	+		Psyr_4226	0.46	-0.6
5,033,531	+		Psyr_4226	0.46	-0.1
5,033,531	+		Psyr_4226	0.46	-2.2
5,033,531	+		Psyr_4226	0.46	-0.3
5,033,531	+		Psyr_4226	0.46	-2.7
5,033,532	-		Psyr_4226	0.47	-0.5
5,033,532	-		Psyr_4226	0.47	-0.3
5,033,532	-		Psyr_4226	0.47	-0.1
5,033,557	+		Psyr_4226	0.48	-0.3
5,033,557	+		Psyr_4226	0.48	-0.2
5,033,557	+		Psyr_4226	0.48	-1.7
5,033,557	+		Psyr_4226	0.48	-0.6
5,033,558	-		Psyr_4226	0.48	-0.6
5,033,558	-		Psyr_4226	0.48	+0.4
5,033,558	-		Psyr_4226	0.48	+0.4
5,033,558	-		Psyr_4226	0.48	+1.1
5,033,558	-		Psyr_4226	0.48	+0.7
5,033,558	-		Psyr_4226	0.48	-1.1
5,033,558	-		Psyr_4226	0.48	-0.7
5,033,558	-		Psyr_4226	0.48	-0.4
5,033,558	-		Psyr_4226	0.48	+0.4
5,033,558	-		Psyr_4226	0.48	-0.7
5,033,601	-		Psyr_4226	0.52	+0.7
5,033,692	+		Psyr_4226	0.58	-0.4
5,033,693	-		Psyr_4226	0.58	+2.2
5,033,693	-		Psyr_4226	0.58	-0.3
5,033,693	-		Psyr_4226	0.58	-1.8
5,033,767	+		Psyr_4226	0.63	+0.0
5,033,767	+		Psyr_4226	0.63	+0.1
5,033,767	+		Psyr_4226	0.63	+0.1
5,033,768	-		Psyr_4226	0.64	+0.8
5,033,773	+		Psyr_4226	0.64	-1.6
5,033,773	+		Psyr_4226	0.64	+0.8
5,033,774	-		Psyr_4226	0.64	+0.2
5,033,774	-		Psyr_4226	0.64	-2.7
5,033,774	-		Psyr_4226	0.64	+0.2
5,033,818	+		Psyr_4226	0.67	+0.0
5,033,819	-		Psyr_4226	0.67	+0.9
5,033,819	-		Psyr_4226	0.67	-1.9
5,033,986	+		Psyr_4226	0.79	-2.2
5,033,986	+		Psyr_4226	0.79	-0.8
5,033,986	+		Psyr_4226	0.79	+1.0
5,033,986	+		Psyr_4226	0.79	+0.1
5,033,986	+		Psyr_4226	0.79	+0.6
5,033,986	+		Psyr_4226	0.79	-0.2
5,033,986	+		Psyr_4226	0.79	+0.3
5,033,987	-		Psyr_4226	0.79	-0.5
5,034,034	+		Psyr_4226	0.83	+1.1
5,034,035	-		Psyr_4226	0.83	+0.8
5,034,094	+		Psyr_4226	0.87	-0.3
5,034,094	+		Psyr_4226	0.87	+0.6
5,034,094	+		Psyr_4226	0.87	-1.4
5,034,094	+		Psyr_4226	0.87	-1.7
5,034,095	-		Psyr_4226	0.87	-1.2
5,034,095	-		Psyr_4226	0.87	+1.4
5,034,119	+		Psyr_4226	0.89	-2.4
5,034,119	+		Psyr_4226	0.89	-0.8
5,034,119	+		Psyr_4226	0.89	-1.0
5,034,119	+		Psyr_4226	0.89	-1.2
5,034,120	-		Psyr_4226	0.89	+0.1
5,034,120	-		Psyr_4226	0.89	-0.8
5,034,121	+		Psyr_4226	0.89	+0.8
5,034,121	+		Psyr_4226	0.89	-0.3
5,034,121	+		Psyr_4226	0.89	+0.4
5,034,121	+		Psyr_4226	0.89	+1.1
5,034,121	+		Psyr_4226	0.89	-3.0
5,034,121	+				+2.0
5,034,122	-		Psyr_4226	0.89	+0.4
5,034,122	-		Psyr_4226	0.89	-1.7
5,034,199	+				-1.3
5,034,200	-				+0.6
5,034,200	-				+1.4
5,034,241	+				-3.3
5,034,275	+				+2.3
5,034,276	-				+0.1
5,034,325	+				+0.1
5,034,438	+				-1.0
5,034,604	-		Psyr_4227	0.18	-0.5
5,034,627	+		Psyr_4227	0.21	-0.2
5,034,627	+		Psyr_4227	0.21	+0.9
5,034,627	+		Psyr_4227	0.21	-1.1
5,034,628	-		Psyr_4227	0.21	-0.2
5,034,628	-		Psyr_4227	0.21	+0.9
5,034,628	-		Psyr_4227	0.21	-1.0
5,034,628	-		Psyr_4227	0.21	-0.3
5,034,628	-		Psyr_4227	0.21	+0.1
5,034,628	-		Psyr_4227	0.21	+0.3
5,034,628	-		Psyr_4227	0.21	+0.6
5,034,628	-		Psyr_4227	0.21	+0.2
5,034,669	+		Psyr_4227	0.25	-2.7
5,034,669	+		Psyr_4227	0.25	-1.8
5,034,670	-		Psyr_4227	0.26	-0.6
5,034,670	-		Psyr_4227	0.26	-0.4
5,034,718	-		Psyr_4227	0.31	-0.5
5,034,742	-		Psyr_4227	0.33	-0.9
5,034,753	+		Psyr_4227	0.35	+0.6
5,034,754	-		Psyr_4227	0.35	-0.2
5,034,754	-		Psyr_4227	0.35	+2.9
5,034,832	+		Psyr_4227	0.43	+0.5
5,034,927	+		Psyr_4227	0.54	+1.3
5,034,927	+		Psyr_4227	0.54	-0.6
5,034,928	-		Psyr_4227	0.54	-1.7
5,034,928	-		Psyr_4227	0.54	+0.7
5,034,928	-		Psyr_4227	0.54	-2.3
5,034,928	-		Psyr_4227	0.54	+1.0
5,034,928	-		Psyr_4227	0.54	-0.6
5,035,008	+		Psyr_4227	0.63	+1.6
5,035,009	-		Psyr_4227	0.63	-0.8
5,035,009	-		Psyr_4227	0.63	-0.5
5,035,091	+		Psyr_4227	0.72	-0.2
5,035,091	+		Psyr_4227	0.72	+1.2
5,035,092	-		Psyr_4227	0.72	+0.7