Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3745

Experiment: epiphytic; Green bean

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	epiphytic; Green bean
4,461,405	+		Psyr_3744	0.61	+1.2
4,461,405	+		Psyr_3744	0.61	-0.8
4,461,405	+		Psyr_3744	0.61	-0.1
4,461,405	+		Psyr_3744	0.61	+1.2
4,461,405	+		Psyr_3744	0.61	+0.0
4,461,405	+		Psyr_3744	0.61	+1.6
4,461,405	+		Psyr_3744	0.61	-1.1
4,461,406	-		Psyr_3744	0.61	+0.2
4,461,406	-		Psyr_3744	0.61	+0.6
4,461,406	-		Psyr_3744	0.61	-0.5
4,461,406	-		Psyr_3744	0.61	-0.6
4,461,406	-		Psyr_3744	0.61	-0.2
4,461,406	-		Psyr_3744	0.61	-2.5
4,461,406	-		Psyr_3744	0.61	+1.1
4,461,558	+		Psyr_3744	0.67	+0.2
4,461,681	-		Psyr_3744	0.72	+0.2
4,461,681	-		Psyr_3744	0.72	+0.7
4,461,681	-		Psyr_3744	0.72	-0.3
4,461,735	+		Psyr_3744	0.74	-0.0
4,461,735	+		Psyr_3744	0.74	+1.7
4,461,735	+		Psyr_3744	0.74	+0.1
4,461,736	-		Psyr_3744	0.74	+0.1
4,461,736	-		Psyr_3744	0.74	-1.6
4,461,744	+		Psyr_3744	0.75	+0.2
4,461,744	+		Psyr_3744	0.75	+0.1
4,461,953	+		Psyr_3744	0.83	+0.7
4,461,953	+		Psyr_3744	0.83	-2.9
4,461,953	+		Psyr_3744	0.83	+0.1
4,461,954	-		Psyr_3744	0.83	-0.1
4,461,954	-		Psyr_3744	0.83	-0.3
4,461,954	-		Psyr_3744	0.83	-0.4
4,461,954	-		Psyr_3744	0.83	+2.4
4,461,954	-		Psyr_3744	0.83	+1.8
4,462,342	+				+1.0
4,462,342	+				-0.7
4,462,368	+				-2.2
4,462,369	-				-0.8
4,462,369	-				+0.6
4,462,369	-				-1.3
4,462,472	-		Psyr_3745	0.10	-0.2
4,462,472	-		Psyr_3745	0.10	+0.6
4,462,472	-		Psyr_3745	0.10	+0.0
4,462,472	-		Psyr_3745	0.10	-0.0
4,462,552	+		Psyr_3745	0.18	-0.1
4,462,552	+		Psyr_3745	0.18	-0.2
4,462,553	-		Psyr_3745	0.18	-0.4
4,462,553	-		Psyr_3745	0.18	+0.5
4,462,553	-		Psyr_3745	0.18	-1.6
4,462,553	-		Psyr_3745	0.18	-1.4
4,462,553	-		Psyr_3745	0.18	+0.7
4,462,698	+		Psyr_3745	0.31	-1.9
4,462,698	+		Psyr_3745	0.31	-0.1
4,462,699	-		Psyr_3745	0.31	-0.8
4,462,711	+		Psyr_3745	0.33	+1.6
4,462,711	+		Psyr_3745	0.33	-2.8
4,462,711	+		Psyr_3745	0.33	-0.1
4,462,711	+		Psyr_3745	0.33	+0.6
4,462,711	+		Psyr_3745	0.33	-1.4
4,462,711	+		Psyr_3745	0.33	-2.2
4,462,711	+		Psyr_3745	0.33	-0.4
4,462,712	-		Psyr_3745	0.33	-0.5
4,462,712	-		Psyr_3745	0.33	+0.6
4,462,712	-		Psyr_3745	0.33	+0.9
4,462,712	-		Psyr_3745	0.33	-0.0
4,462,712	-		Psyr_3745	0.33	+1.0
4,462,801	-		Psyr_3745	0.41	+0.6
4,462,924	+		Psyr_3745	0.52	-0.8
4,462,957	+		Psyr_3745	0.55	+1.6
4,462,957	+		Psyr_3745	0.55	+1.2
4,462,958	-		Psyr_3745	0.55	+0.2
4,462,960	+		Psyr_3745	0.56	-0.2
4,462,960	+		Psyr_3745	0.56	+0.7
4,462,960	+		Psyr_3745	0.56	-0.3
4,462,960	+		Psyr_3745	0.56	-0.5
4,462,961	-		Psyr_3745	0.56	-1.2
4,462,961	-		Psyr_3745	0.56	+1.3
4,462,961	-		Psyr_3745	0.56	+1.6
4,462,963	+		Psyr_3745	0.56	+1.2
4,462,963	+		Psyr_3745	0.56	+0.2
4,462,964	-		Psyr_3745	0.56	+1.7
4,462,964	-		Psyr_3745	0.56	+0.6
4,462,964	-		Psyr_3745	0.56	-1.8
4,462,964	-		Psyr_3745	0.56	+1.6
4,462,964	-		Psyr_3745	0.56	+1.9
4,463,138	-		Psyr_3745	0.72	-1.2
4,463,268	+		Psyr_3745	0.84	+0.2
4,463,268	+		Psyr_3745	0.84	-0.9
4,463,268	+		Psyr_3745	0.84	+0.8
4,463,269	-		Psyr_3745	0.84	+0.8
4,463,269	-		Psyr_3745	0.84	-1.8
4,463,269	-		Psyr_3745	0.84	+2.0
4,463,361	+				-0.3
4,463,528	+				+0.0
4,463,597	+		Psyr_3746	0.17	-0.2
4,463,621	+		Psyr_3746	0.21	-1.5
4,463,636	-		Psyr_3746	0.24	-0.2
4,463,636	-		Psyr_3746	0.24	-0.0
4,463,636	-		Psyr_3746	0.24	-0.1
4,463,637	+		Psyr_3746	0.24	+2.4
4,463,637	+		Psyr_3746	0.24	+1.5
4,463,637	+		Psyr_3746	0.24	-2.5
4,463,657	+		Psyr_3746	0.28	+0.2
4,463,657	+		Psyr_3746	0.28	-0.4
4,463,658	-		Psyr_3746	0.28	+0.8
4,463,708	+		Psyr_3746	0.37	+0.1
4,463,708	+		Psyr_3746	0.37	-2.6
4,463,708	+		Psyr_3746	0.37	+1.2
4,463,708	+		Psyr_3746	0.37	+1.2
4,463,708	+		Psyr_3746	0.37	-0.0
4,463,709	-		Psyr_3746	0.38	+1.1
4,463,709	-		Psyr_3746	0.38	-0.9
4,463,709	-		Psyr_3746	0.38	-0.7
4,463,709	-		Psyr_3746	0.38	-2.6
4,463,709	-		Psyr_3746	0.38	-0.0
4,463,709	-		Psyr_3746	0.38	-0.5
4,463,709	-		Psyr_3746	0.38	+0.0
4,463,759	+		Psyr_3746	0.47	-1.9
4,463,759	+		Psyr_3746	0.47	-1.7
4,463,759	+		Psyr_3746	0.47	+0.7
4,463,760	-		Psyr_3746	0.47	+1.2
4,463,760	-		Psyr_3746	0.47	+0.6
4,463,760	-		Psyr_3746	0.47	+0.6
4,463,760	-		Psyr_3746	0.47	+0.1
4,463,760	-		Psyr_3746	0.47	-0.3
4,463,760	-		Psyr_3746	0.47	-1.3
4,463,897	-		Psyr_3746	0.73	+0.9
4,463,942	+		Psyr_3746	0.82	+0.0
4,463,942	+		Psyr_3746	0.82	+2.2
4,463,942	+		Psyr_3746	0.82	+1.0
4,463,942	+		Psyr_3746	0.82	-0.3
4,463,942	+		Psyr_3746	0.82	-0.1
4,463,943	-		Psyr_3746	0.82	+1.0
4,463,943	-		Psyr_3746	0.82	+0.9
4,463,943	-		Psyr_3746	0.82	+0.1
4,463,943	-		Psyr_3746	0.82	-1.0
4,464,103	+				-0.0
4,464,115	+				-0.6
4,464,115	+				+0.3
4,464,116	-				+1.2
4,464,163	+				-1.8
4,464,163	+				+0.8
4,464,163	+				-0.9
4,464,163	+				+0.0
4,464,163	+				-0.6
4,464,163	+				-0.8
4,464,163	+				+1.7
4,464,163	+				-2.4
4,464,164	-				+0.5
4,464,164	-				+0.1
4,464,164	-				-1.4
4,464,164	-				-0.2
4,464,164	-				+3.6
4,464,164	-				+0.1
4,464,164	-				+0.1
4,464,167	+				-1.4
4,464,167	+				-2.8
4,464,167	+				-0.3
4,464,167	+				+0.8
4,464,168	-				-0.4
4,464,168	-				+0.4
4,464,168	-				-0.4
4,464,168	-				-0.8
4,464,206	+				+1.3
4,464,206	+				-1.5
4,464,207	-				+2.0
4,464,248	+				+0.4
4,464,248	+				+0.6
4,464,248	+				-0.4
4,464,248	+				-0.8
4,464,248	+				+1.5
4,464,248	+				+1.2
4,464,249	-				+0.3
4,464,249	-				+1.5
4,464,249	-				+1.2
4,464,249	-				+1.2
4,464,249	-				-0.0