Strain Fitness in Pantoea sp. MT58 around IAI47_18800

Experiment: Defined media control, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Defined media control, anaerobic
4,007,009	+				+0.1
4,007,016	+				-1.3
4,007,017	-				+1.1
4,007,017	-				+0.1
4,007,026	-				+0.0
4,007,075	+				+0.1
4,007,075	+				+0.9
4,007,075	+				-0.5
4,007,075	+				+1.5
4,007,075	+				+0.0
4,007,075	+				+1.2
4,007,075	+				-0.2
4,007,075	+				+1.3
4,007,076	-				+0.6
4,007,076	-				-0.2
4,007,076	-				-0.0
4,007,076	-				+0.9
4,007,076	-				-1.9
4,007,076	-				+1.2
4,007,076	-				-1.6
4,007,076	-				-2.0
4,007,076	-				+0.3
4,007,076	-				+1.7
4,007,076	-				-2.1
4,007,077	+				+0.4
4,007,077	+				+0.5
4,007,077	+				-0.4
4,007,078	-				-0.7
4,007,078	-				-1.3
4,007,078	-				-0.3
4,007,078	-				-0.6
4,007,078	-				+0.4
4,007,078	-				+0.1
4,007,167	+		IAI47_18795	0.17	+1.0
4,007,167	+		IAI47_18795	0.17	+1.2
4,007,168	-		IAI47_18795	0.17	-0.4
4,007,168	-		IAI47_18795	0.17	-0.1
4,007,168	-		IAI47_18795	0.17	-0.9
4,007,181	-		IAI47_18795	0.19	-0.5
4,007,249	+		IAI47_18795	0.26	-1.2
4,007,250	-		IAI47_18795	0.26	+1.7
4,007,250	-		IAI47_18795	0.26	-0.8
4,007,250	-		IAI47_18795	0.26	+0.1
4,007,250	-		IAI47_18795	0.26	-1.0
4,007,270	+		IAI47_18795	0.28	-0.4
4,007,270	+		IAI47_18795	0.28	+0.7
4,007,270	+		IAI47_18795	0.28	-0.8
4,007,270	+		IAI47_18795	0.28	+0.2
4,007,270	+		IAI47_18795	0.28	+1.0
4,007,270	+		IAI47_18795	0.28	+1.3
4,007,271	-		IAI47_18795	0.28	+0.6
4,007,271	-		IAI47_18795	0.28	+1.2
4,007,271	-		IAI47_18795	0.28	-1.6
4,007,271	-		IAI47_18795	0.28	-1.6
4,007,271	-		IAI47_18795	0.28	-0.9
4,007,271	-		IAI47_18795	0.28	-0.3
4,007,271	-		IAI47_18795	0.28	-0.6
4,007,271	-		IAI47_18795	0.28	+0.3
4,007,271	-		IAI47_18795	0.28	+0.8
4,007,271	-		IAI47_18795	0.28	+0.0
4,007,271	-		IAI47_18795	0.28	-0.8
4,007,272	+		IAI47_18795	0.28	-1.3
4,007,272	+		IAI47_18795	0.28	-1.7
4,007,272	+		IAI47_18795	0.28	+0.4
4,007,272	+		IAI47_18795	0.28	-0.5
4,007,272	+		IAI47_18795	0.28	-1.8
4,007,272	+		IAI47_18795	0.28	+0.1
4,007,273	-		IAI47_18795	0.28	-2.3
4,007,273	-		IAI47_18795	0.28	-2.5
4,007,273	-		IAI47_18795	0.28	-0.8
4,007,273	-		IAI47_18795	0.28	+1.1
4,007,274	-		IAI47_18795	0.28	-0.4
4,007,339	+		IAI47_18795	0.35	+1.7
4,007,339	+		IAI47_18795	0.35	+0.8
4,007,339	+		IAI47_18795	0.35	+0.9
4,007,339	+		IAI47_18795	0.35	+0.4
4,007,340	-		IAI47_18795	0.35	-0.4
4,007,340	-		IAI47_18795	0.35	+0.1
4,007,340	-		IAI47_18795	0.35	+0.8
4,007,340	-		IAI47_18795	0.35	-0.3
4,007,340	-		IAI47_18795	0.35	-2.0
4,007,340	-		IAI47_18795	0.35	-0.0
4,007,365	-		IAI47_18795	0.37	+0.4
4,007,375	+		IAI47_18795	0.38	+0.9
4,007,375	+		IAI47_18795	0.38	-1.2
4,007,375	+		IAI47_18795	0.38	+0.2
4,007,375	+		IAI47_18795	0.38	-0.8
4,007,375	+		IAI47_18795	0.38	+1.4
4,007,375	+		IAI47_18795	0.38	+0.5
4,007,375	+		IAI47_18795	0.38	-1.4
4,007,376	-		IAI47_18795	0.38	+0.1
4,007,376	-		IAI47_18795	0.38	+0.0
4,007,376	-		IAI47_18795	0.38	-0.6
4,007,420	+		IAI47_18795	0.43	+0.2
4,007,421	-		IAI47_18795	0.43	-0.3
4,007,421	-		IAI47_18795	0.43	+1.8
4,007,421	-		IAI47_18795	0.43	-0.3
4,007,421	-		IAI47_18795	0.43	-1.0
4,007,467	+		IAI47_18795	0.47	+1.9
4,007,468	-		IAI47_18795	0.48	-1.5
4,007,468	-		IAI47_18795	0.48	-0.3
4,007,516	+		IAI47_18795	0.52	-1.0
4,007,516	+		IAI47_18795	0.52	-1.3
4,007,516	+		IAI47_18795	0.52	-0.1
4,007,516	+		IAI47_18795	0.52	+1.0
4,007,516	+		IAI47_18795	0.52	+2.0
4,007,517	-		IAI47_18795	0.53	-0.3
4,007,517	-		IAI47_18795	0.53	+0.0
4,007,517	-		IAI47_18795	0.53	+0.4
4,007,517	-		IAI47_18795	0.53	-0.7
4,007,537	+		IAI47_18795	0.55	-0.5
4,007,537	+		IAI47_18795	0.55	-0.5
4,007,537	+		IAI47_18795	0.55	+1.8
4,007,537	+		IAI47_18795	0.55	-0.0
4,007,537	+		IAI47_18795	0.55	+1.6
4,007,538	-		IAI47_18795	0.55	+0.3
4,007,538	-		IAI47_18795	0.55	+1.3
4,007,538	-		IAI47_18795	0.55	+0.6
4,007,538	-		IAI47_18795	0.55	-2.0
4,007,538	-		IAI47_18795	0.55	-1.4
4,007,540	+		IAI47_18795	0.55	-1.5
4,007,540	+		IAI47_18795	0.55	-0.8
4,007,541	-		IAI47_18795	0.55	-1.0
4,007,541	-		IAI47_18795	0.55	+0.4
4,007,541	-		IAI47_18795	0.55	-1.8
4,007,549	+		IAI47_18795	0.56	+1.0
4,007,549	+		IAI47_18795	0.56	+1.1
4,007,549	+		IAI47_18795	0.56	+0.3
4,007,549	+		IAI47_18795	0.56	-2.2
4,007,549	+		IAI47_18795	0.56	-0.2
4,007,549	+		IAI47_18795	0.56	-0.8
4,007,550	-		IAI47_18795	0.56	-0.1
4,007,550	-		IAI47_18795	0.56	+0.2
4,007,550	-		IAI47_18795	0.56	+0.2
4,007,550	-		IAI47_18795	0.56	+0.0
4,007,550	-		IAI47_18795	0.56	+1.1
4,007,550	-		IAI47_18795	0.56	-0.9
4,007,550	-		IAI47_18795	0.56	-0.5
4,007,550	-		IAI47_18795	0.56	-0.8
4,007,550	-		IAI47_18795	0.56	-0.7
4,007,550	-		IAI47_18795	0.56	-2.3
4,007,550	-		IAI47_18795	0.56	+1.2
4,007,550	-		IAI47_18795	0.56	+0.2
4,007,550	-		IAI47_18795	0.56	-0.3
4,007,584	+		IAI47_18795	0.59	-0.8
4,007,585	-		IAI47_18795	0.59	+0.3
4,007,626	+		IAI47_18795	0.63	-0.1
4,007,644	+		IAI47_18795	0.65	+1.4
4,007,644	+		IAI47_18795	0.65	-0.5
4,007,644	+		IAI47_18795	0.65	+0.7
4,007,645	-		IAI47_18795	0.65	-0.2
4,007,645	-		IAI47_18795	0.65	-0.5
4,007,645	-		IAI47_18795	0.65	+0.9
4,007,645	-		IAI47_18795	0.65	-1.2
4,007,647	+		IAI47_18795	0.66	+1.3
4,007,647	+		IAI47_18795	0.66	-1.0
4,007,647	+		IAI47_18795	0.66	+1.2
4,007,648	-		IAI47_18795	0.66	-1.4
4,007,648	-		IAI47_18795	0.66	-1.6
4,007,648	-		IAI47_18795	0.66	+0.0
4,007,648	-		IAI47_18795	0.66	+0.3
4,007,689	+		IAI47_18795	0.70	+1.1
4,007,695	+		IAI47_18795	0.70	-0.7
4,007,696	-		IAI47_18795	0.70	+0.6
4,007,696	-		IAI47_18795	0.70	-0.3
4,007,702	+		IAI47_18795	0.71	+0.9
4,007,703	-		IAI47_18795	0.71	-0.2
4,007,703	-		IAI47_18795	0.71	-3.2
4,007,708	+		IAI47_18795	0.72	+1.2
4,007,708	+		IAI47_18795	0.72	-0.7
4,007,708	+		IAI47_18795	0.72	+0.4
4,007,708	+		IAI47_18795	0.72	+0.5
4,007,709	-		IAI47_18795	0.72	+0.7
4,007,729	-		IAI47_18795	0.74	+0.7
4,007,758	+		IAI47_18795	0.77	+0.8
4,007,759	-		IAI47_18795	0.77	-0.4
4,007,793	+		IAI47_18795	0.80	-0.3
4,007,825	+		IAI47_18795	0.83	+0.2
4,007,825	+		IAI47_18795	0.83	-1.3
4,007,852	+		IAI47_18795	0.86	-0.2
4,007,852	+		IAI47_18795	0.86	+0.7
4,007,853	-		IAI47_18795	0.86	+1.0
4,007,853	-		IAI47_18795	0.86	+0.5
4,007,870	+		IAI47_18795	0.88	+0.2
4,007,870	+		IAI47_18795	0.88	-1.8
4,007,870	+		IAI47_18795	0.88	-0.5
4,007,870	+		IAI47_18795	0.88	+0.0
4,007,870	+		IAI47_18795	0.88	+0.5
4,007,871	-		IAI47_18795	0.88	+0.6
4,007,878	+		IAI47_18795	0.89	-0.8
4,007,878	+		IAI47_18795	0.89	-2.9
4,007,878	+		IAI47_18795	0.89	+0.1
4,007,878	+		IAI47_18795	0.89	-0.6
4,007,878	+		IAI47_18795	0.89	-1.3
4,007,878	+		IAI47_18795	0.89	-0.5
4,007,878	+		IAI47_18795	0.89	+0.7
4,007,878	+				+3.2
4,007,878	+		IAI47_18795	0.89	+1.7
4,007,878	+		IAI47_18795	0.89	-0.6
4,007,878	+		IAI47_18795	0.89	-1.2
4,007,878	+		IAI47_18795	0.89	+2.9
4,007,878	+		IAI47_18795	0.89	-0.2
4,007,879	-		IAI47_18795	0.89	+1.2
4,007,879	-		IAI47_18795	0.89	+1.3
4,007,879	-		IAI47_18795	0.89	+1.7
4,007,879	-		IAI47_18795	0.89	-1.2
4,007,879	-		IAI47_18795	0.89	-0.8
4,007,879	-		IAI47_18795	0.89	-2.5
4,007,879	-		IAI47_18795	0.89	-1.9
4,007,879	-		IAI47_18795	0.89	-0.7
4,007,879	-		IAI47_18795	0.89	+2.2
4,008,016	+				-0.3
4,008,017	-				-0.4
4,008,017	-				-1.1
4,008,119	+		IAI47_18800	0.16	-0.8
4,008,119	+		IAI47_18800	0.16	-1.9
4,008,119	+		IAI47_18800	0.16	+0.5
4,008,119	+		IAI47_18800	0.16	-1.0
4,008,119	+		IAI47_18800	0.16	+0.2
4,008,119	+		IAI47_18800	0.16	-2.5
4,008,120	-		IAI47_18800	0.16	+1.2
4,008,369	+		IAI47_18800	0.42	-0.5
4,008,370	-		IAI47_18800	0.42	-1.3
4,008,438	+		IAI47_18800	0.50	-2.0
4,008,507	+		IAI47_18800	0.57	+0.7
4,008,535	+		IAI47_18800	0.60	-2.3
4,008,535	+		IAI47_18800	0.60	+1.7
4,008,535	+		IAI47_18800	0.60	+1.0
4,008,536	-		IAI47_18800	0.60	-0.1
4,008,536	-		IAI47_18800	0.60	-1.8
4,008,536	-		IAI47_18800	0.60	+0.5
4,008,597	+		IAI47_18800	0.67	-1.5
4,008,597	+		IAI47_18800	0.67	-1.6
4,008,597	+		IAI47_18800	0.67	-0.3
4,008,597	+		IAI47_18800	0.67	-0.0
4,008,598	-		IAI47_18800	0.67	-0.1
4,008,598	-		IAI47_18800	0.67	+0.5
4,008,598	-		IAI47_18800	0.67	-0.4
4,008,598	-		IAI47_18800	0.67	-0.1
4,008,598	-		IAI47_18800	0.67	-0.1
4,008,598	-		IAI47_18800	0.67	-2.1
4,008,598	-		IAI47_18800	0.67	+0.1
4,008,598	-		IAI47_18800	0.67	-0.0
4,008,598	-		IAI47_18800	0.67	-1.6
4,008,671	+		IAI47_18800	0.75	-0.2
4,008,671	+		IAI47_18800	0.75	+0.3
4,008,672	-		IAI47_18800	0.75	+0.1
4,008,672	-		IAI47_18800	0.75	+1.0
4,008,672	-		IAI47_18800	0.75	-1.8
4,008,689	+		IAI47_18800	0.77	+0.3
4,008,689	+		IAI47_18800	0.77	+0.2
4,008,690	-		IAI47_18800	0.77	-1.1
4,008,690	-		IAI47_18800	0.77	+0.2
4,008,798	+		IAI47_18800	0.88	-1.6
4,008,798	+		IAI47_18800	0.88	-0.2
4,008,799	-		IAI47_18800	0.88	+0.1
4,008,799	-		IAI47_18800	0.88	-0.5
4,008,799	-		IAI47_18800	0.88	-0.5
4,008,800	+		IAI47_18800	0.89	-0.2
4,008,800	+		IAI47_18800	0.89	-0.1
4,008,800	+		IAI47_18800	0.89	+0.7
4,008,800	+		IAI47_18800	0.89	+0.6
4,008,800	+		IAI47_18800	0.89	+0.7
4,008,800	+		IAI47_18800	0.89	-2.0
4,008,800	+		IAI47_18800	0.89	-0.3
4,008,800	+		IAI47_18800	0.89	-0.2
4,008,801	-		IAI47_18800	0.89	+0.5
4,008,801	-		IAI47_18800	0.89	+1.0
4,008,801	-		IAI47_18800	0.89	+1.3
4,008,906	+				-2.8
4,008,907	-				-0.0
4,008,921	+				-2.1
4,008,921	+				-2.7
4,008,921	+				-0.8
4,008,922	-				-1.8
4,008,922	-				-1.0
4,008,922	-				+0.3
4,008,922	-				-0.6
4,008,922	-				+0.7
4,008,970	+				+1.0
4,008,971	-				+0.4
4,009,029	+		IAI47_18805	0.17	-2.1
4,009,029	+		IAI47_18805	0.17	-2.7
4,009,029	+		IAI47_18805	0.17	-0.9
4,009,029	+		IAI47_18805	0.17	-0.8
4,009,030	-		IAI47_18805	0.17	-1.3
4,009,030	-		IAI47_18805	0.17	-2.3
4,009,030	-		IAI47_18805	0.17	-1.8
4,009,032	+		IAI47_18805	0.17	-0.3
4,009,032	+		IAI47_18805	0.17	-1.6
4,009,032	+		IAI47_18805	0.17	-0.9
4,009,032	+		IAI47_18805	0.17	+1.6
4,009,032	+		IAI47_18805	0.17	-0.1
4,009,032	+		IAI47_18805	0.17	+0.1
4,009,033	-		IAI47_18805	0.17	-1.3
4,009,033	-		IAI47_18805	0.17	-2.5
4,009,033	-		IAI47_18805	0.17	+1.8
4,009,033	-		IAI47_18805	0.17	-0.0
4,009,033	-		IAI47_18805	0.17	+1.5
4,009,036	-		IAI47_18805	0.18	-0.3
4,009,036	-		IAI47_18805	0.18	+1.1
4,009,036	-		IAI47_18805	0.18	-0.3
4,009,036	-		IAI47_18805	0.18	-1.0
4,009,036	-				+2.2
4,009,096	+		IAI47_18805	0.27	-0.5
4,009,096	+		IAI47_18805	0.27	+0.2
4,009,096	+		IAI47_18805	0.27	-0.5
4,009,096	+		IAI47_18805	0.27	-0.6
4,009,096	+		IAI47_18805	0.27	-1.2
4,009,097	-		IAI47_18805	0.27	+0.0
4,009,097	-		IAI47_18805	0.27	-0.5
4,009,097	-		IAI47_18805	0.27	+0.2
4,009,137	+		IAI47_18805	0.33	-0.8
4,009,137	+		IAI47_18805	0.33	-2.0
4,009,137	+		IAI47_18805	0.33	+0.2
4,009,176	+		IAI47_18805	0.39	-1.0
4,009,185	+		IAI47_18805	0.40	+0.5
4,009,186	-		IAI47_18805	0.40	+1.0
4,009,186	-		IAI47_18805	0.40	+0.4
4,009,221	-		IAI47_18805	0.46	-3.6
4,009,247	+		IAI47_18805	0.50	-1.3
4,009,265	+		IAI47_18805	0.52	-0.4
4,009,265	+		IAI47_18805	0.52	-0.1
4,009,265	+		IAI47_18805	0.52	-0.3
4,009,265	+		IAI47_18805	0.52	-1.5
4,009,265	+		IAI47_18805	0.52	-1.6
4,009,265	+		IAI47_18805	0.52	+0.1
4,009,265	+		IAI47_18805	0.52	-2.6
4,009,266	-		IAI47_18805	0.52	-1.9
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4,009,266	-		IAI47_18805	0.52	-0.3
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4,009,446	+		IAI47_18805	0.80	+0.5
4,009,446	+		IAI47_18805	0.80	+0.0
4,009,447	-		IAI47_18805	0.80	+0.9
4,009,501	+		IAI47_18805	0.88	+0.5
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4,009,507	-		IAI47_18805	0.89	+0.2
4,009,507	-		IAI47_18805	0.89	+0.4
4,009,507	-				+2.2
4,009,507	-		IAI47_18805	0.89	+1.3
4,009,507	-		IAI47_18805	0.89	-1.2
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4,009,571	+				+0.2
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4,009,572	-				-2.9
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