Experiment: Lomefloxacin 0.012 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02415 and HSERO_RS02420 are separated by 611 nucleotides HSERO_RS02420 and HSERO_RS02425 are separated by 24 nucleotides HSERO_RS02425 and HSERO_RS02430 are separated by 182 nucleotides
HSERO_RS02415: HSERO_RS02415 - hemolysin D, at 530,092 to 531,300
_RS02415
HSERO_RS02420: HSERO_RS02420 - TetR family transcriptional regulator, at 531,912 to 532,547
_RS02420
HSERO_RS02425: HSERO_RS02425 - transcriptional activator, at 532,572 to 533,069
_RS02425
HSERO_RS02430: HSERO_RS02430 - sulfurtransferase, at 533,252 to 533,575
_RS02430
Position (kb) 531
532
533 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 530.996 kb on + strand, within HSERO_RS02415 at 530.996 kb on + strand, within HSERO_RS02415 at 530.996 kb on + strand, within HSERO_RS02415 at 530.996 kb on + strand, within HSERO_RS02415 at 530.996 kb on + strand, within HSERO_RS02415 at 530.996 kb on + strand, within HSERO_RS02415 at 531.004 kb on - strand, within HSERO_RS02415 at 531.004 kb on - strand, within HSERO_RS02415 at 531.055 kb on - strand, within HSERO_RS02415 at 531.120 kb on + strand, within HSERO_RS02415 at 531.127 kb on - strand, within HSERO_RS02415 at 531.146 kb on - strand, within HSERO_RS02415 at 531.236 kb on - strand at 531.271 kb on - strand at 531.357 kb on + strand at 532.470 kb on - strand, within HSERO_RS02420 at 532.568 kb on + strand at 532.643 kb on + strand, within HSERO_RS02425 at 532.732 kb on - strand, within HSERO_RS02425 at 532.872 kb on + strand, within HSERO_RS02425 at 532.881 kb on + strand, within HSERO_RS02425 at 532.889 kb on - strand at 533.023 kb on + strand at 533.031 kb on - strand at 533.072 kb on - strand at 533.309 kb on - strand, within HSERO_RS02430 at 533.392 kb on + strand, within HSERO_RS02430 at 533.413 kb on + strand, within HSERO_RS02430
Per-strain Table
Position Strand Gene LocusTag Fraction Lomefloxacin 0.012 mM remove 530,996 + HSERO_RS02415 0.75 -5.0 530,996 + HSERO_RS02415 0.75 -3.0 530,996 + HSERO_RS02415 0.75 -5.2 530,996 + HSERO_RS02415 0.75 -3.9 530,996 + HSERO_RS02415 0.75 -2.7 530,996 + HSERO_RS02415 0.75 -2.9 531,004 - HSERO_RS02415 0.75 -2.0 531,004 - HSERO_RS02415 0.75 -2.0 531,055 - HSERO_RS02415 0.80 -3.5 531,120 + HSERO_RS02415 0.85 -2.7 531,127 - HSERO_RS02415 0.86 +0.3 531,146 - HSERO_RS02415 0.87 -3.8 531,236 - -4.0 531,271 - -3.9 531,357 + -5.4 532,470 - HSERO_RS02420 0.88 +4.3 532,568 + +0.5 532,643 + HSERO_RS02425 0.14 -2.1 532,732 - HSERO_RS02425 0.32 -0.5 532,872 + HSERO_RS02425 0.60 -1.8 532,881 + HSERO_RS02425 0.62 -2.4 532,889 - -1.5 533,023 + -1.4 533,031 - -0.4 533,072 - -0.4 533,309 - HSERO_RS02430 0.18 -0.3 533,392 + HSERO_RS02430 0.43 -1.0 533,413 + HSERO_RS02430 0.50 -2.3
Or see this region's nucleotide sequence