Experiment: Lomefloxacin 0.012 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02405 and HSERO_RS02410 are separated by 2 nucleotides HSERO_RS02410 and HSERO_RS02415 are separated by 11 nucleotides
HSERO_RS02405: HSERO_RS02405 - multidrug transporter, at 525,480 to 526,931
_RS02405
HSERO_RS02410: HSERO_RS02410 - acriflavine resistance protein B, at 526,934 to 530,080
_RS02410
HSERO_RS02415: HSERO_RS02415 - hemolysin D, at 530,092 to 531,300
_RS02415
Position (kb) 526
527
528
529
530
531 Strain fitness (log2 ratio) -7
-6
-5
-4
-3
-2
-1
0
1 at 526.263 kb on + strand, within HSERO_RS02405 at 526.323 kb on + strand, within HSERO_RS02405 at 526.344 kb on - strand, within HSERO_RS02405 at 526.359 kb on - strand, within HSERO_RS02405 at 526.359 kb on - strand, within HSERO_RS02405 at 526.872 kb on + strand at 526.984 kb on + strand at 527.231 kb on - strand at 527.324 kb on - strand, within HSERO_RS02410 at 527.351 kb on + strand, within HSERO_RS02410 at 527.766 kb on + strand, within HSERO_RS02410 at 527.897 kb on - strand, within HSERO_RS02410 at 528.122 kb on - strand, within HSERO_RS02410 at 528.199 kb on - strand, within HSERO_RS02410 at 528.301 kb on - strand, within HSERO_RS02410 at 528.424 kb on + strand, within HSERO_RS02410 at 528.424 kb on + strand, within HSERO_RS02410 at 528.432 kb on - strand, within HSERO_RS02410 at 528.445 kb on + strand, within HSERO_RS02410 at 528.479 kb on - strand, within HSERO_RS02410 at 528.742 kb on + strand, within HSERO_RS02410 at 528.876 kb on - strand, within HSERO_RS02410 at 528.945 kb on + strand, within HSERO_RS02410 at 529.141 kb on - strand, within HSERO_RS02410 at 529.272 kb on + strand, within HSERO_RS02410 at 529.356 kb on - strand, within HSERO_RS02410 at 529.383 kb on - strand, within HSERO_RS02410 at 529.491 kb on - strand, within HSERO_RS02410 at 529.637 kb on - strand, within HSERO_RS02410 at 529.762 kb on - strand, within HSERO_RS02410 at 529.762 kb on - strand, within HSERO_RS02410 at 529.795 kb on - strand at 529.809 kb on - strand at 529.856 kb on - strand at 530.053 kb on - strand at 530.193 kb on + strand at 530.321 kb on + strand, within HSERO_RS02415 at 530.424 kb on + strand, within HSERO_RS02415 at 530.429 kb on - strand, within HSERO_RS02415 at 530.455 kb on - strand, within HSERO_RS02415 at 530.499 kb on - strand, within HSERO_RS02415 at 530.594 kb on + strand, within HSERO_RS02415 at 530.602 kb on - strand, within HSERO_RS02415 at 530.612 kb on + strand, within HSERO_RS02415 at 530.637 kb on + strand, within HSERO_RS02415 at 530.647 kb on + strand, within HSERO_RS02415 at 530.655 kb on - strand, within HSERO_RS02415 at 530.689 kb on - strand, within HSERO_RS02415 at 530.749 kb on + strand, within HSERO_RS02415 at 530.791 kb on - strand at 530.892 kb on - strand, within HSERO_RS02415 at 530.996 kb on + strand, within HSERO_RS02415 at 530.996 kb on + strand, within HSERO_RS02415 at 530.996 kb on + strand, within HSERO_RS02415 at 530.996 kb on + strand, within HSERO_RS02415 at 530.996 kb on + strand, within HSERO_RS02415 at 530.996 kb on + strand, within HSERO_RS02415 at 531.004 kb on - strand, within HSERO_RS02415 at 531.004 kb on - strand, within HSERO_RS02415 at 531.055 kb on - strand, within HSERO_RS02415
Per-strain Table
Position Strand Gene LocusTag Fraction Lomefloxacin 0.012 mM remove 526,263 + HSERO_RS02405 0.54 -3.5 526,323 + HSERO_RS02405 0.58 -2.9 526,344 - HSERO_RS02405 0.60 -5.4 526,359 - HSERO_RS02405 0.61 -2.2 526,359 - HSERO_RS02405 0.61 -5.1 526,872 + -5.9 526,984 + -6.2 527,231 - -3.5 527,324 - HSERO_RS02410 0.12 -1.8 527,351 + HSERO_RS02410 0.13 -3.1 527,766 + HSERO_RS02410 0.26 -2.7 527,897 - HSERO_RS02410 0.31 -3.6 528,122 - HSERO_RS02410 0.38 -3.9 528,199 - HSERO_RS02410 0.40 -3.9 528,301 - HSERO_RS02410 0.43 -4.4 528,424 + HSERO_RS02410 0.47 -2.2 528,424 + HSERO_RS02410 0.47 -4.5 528,432 - HSERO_RS02410 0.48 -5.1 528,445 + HSERO_RS02410 0.48 -4.8 528,479 - HSERO_RS02410 0.49 -5.2 528,742 + HSERO_RS02410 0.57 -5.0 528,876 - HSERO_RS02410 0.62 -2.3 528,945 + HSERO_RS02410 0.64 -4.6 529,141 - HSERO_RS02410 0.70 -7.7 529,272 + HSERO_RS02410 0.74 -4.7 529,356 - HSERO_RS02410 0.77 -6.5 529,383 - HSERO_RS02410 0.78 -6.2 529,491 - HSERO_RS02410 0.81 -3.3 529,637 - HSERO_RS02410 0.86 -4.6 529,762 - HSERO_RS02410 0.90 -0.7 529,762 - HSERO_RS02410 0.90 -5.0 529,795 - -4.2 529,809 - -2.9 529,856 - -4.6 530,053 - -3.2 530,193 + -4.3 530,321 + HSERO_RS02415 0.19 -4.3 530,424 + HSERO_RS02415 0.27 -4.8 530,429 - HSERO_RS02415 0.28 -2.0 530,455 - HSERO_RS02415 0.30 -3.6 530,499 - HSERO_RS02415 0.34 -4.9 530,594 + HSERO_RS02415 0.42 -5.0 530,602 - HSERO_RS02415 0.42 -1.7 530,612 + HSERO_RS02415 0.43 -5.3 530,637 + HSERO_RS02415 0.45 -5.7 530,647 + HSERO_RS02415 0.46 -5.0 530,655 - HSERO_RS02415 0.47 -3.3 530,689 - HSERO_RS02415 0.49 -2.6 530,749 + HSERO_RS02415 0.54 -4.4 530,791 - +0.8 530,892 - HSERO_RS02415 0.66 -5.4 530,996 + HSERO_RS02415 0.75 -5.0 530,996 + HSERO_RS02415 0.75 -3.0 530,996 + HSERO_RS02415 0.75 -5.2 530,996 + HSERO_RS02415 0.75 -3.9 530,996 + HSERO_RS02415 0.75 -2.7 530,996 + HSERO_RS02415 0.75 -2.9 531,004 - HSERO_RS02415 0.75 -2.0 531,004 - HSERO_RS02415 0.75 -2.0 531,055 - HSERO_RS02415 0.80 -3.5
Or see this region's nucleotide sequence