Experiment: Lomefloxacin 0.012 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02250 and HSERO_RS02255 are separated by 207 nucleotides HSERO_RS02255 and HSERO_RS02260 are separated by 0 nucleotides HSERO_RS02260 and HSERO_RS02265 are separated by 435 nucleotides
HSERO_RS02250: HSERO_RS02250 - hypothetical protein, at 491,474 to 492,166
_RS02250
HSERO_RS02255: HSERO_RS02255 - decarboxylase, at 492,374 to 493,120
_RS02255
HSERO_RS02260: HSERO_RS02260 - DNA polymerase I, at 493,121 to 495,883
_RS02260
HSERO_RS02265: HSERO_RS02265 - chemotaxis protein, at 496,319 to 498,010
_RS02265
Position (kb) 493
494
495
496 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 492.123 kb on + strand at 492.124 kb on + strand at 492.175 kb on + strand at 492.270 kb on + strand at 492.270 kb on + strand at 492.370 kb on + strand at 492.390 kb on - strand at 492.395 kb on - strand at 492.480 kb on + strand, within HSERO_RS02255 at 492.564 kb on + strand, within HSERO_RS02255 at 492.855 kb on - strand, within HSERO_RS02255 at 492.987 kb on - strand, within HSERO_RS02255 at 493.909 kb on + strand, within HSERO_RS02260 at 493.917 kb on - strand, within HSERO_RS02260 at 494.804 kb on + strand, within HSERO_RS02260 at 495.182 kb on + strand, within HSERO_RS02260 at 495.190 kb on - strand, within HSERO_RS02260 at 495.691 kb on - strand at 496.020 kb on + strand at 496.162 kb on + strand at 496.237 kb on + strand at 496.303 kb on + strand at 496.424 kb on + strand at 496.485 kb on - strand at 496.540 kb on + strand, within HSERO_RS02265 at 496.590 kb on + strand, within HSERO_RS02265 at 496.627 kb on + strand, within HSERO_RS02265 at 496.637 kb on + strand, within HSERO_RS02265 at 496.643 kb on + strand, within HSERO_RS02265 at 496.665 kb on + strand, within HSERO_RS02265 at 496.744 kb on + strand, within HSERO_RS02265 at 496.786 kb on - strand, within HSERO_RS02265
Per-strain Table
Position Strand Gene LocusTag Fraction Lomefloxacin 0.012 mM remove 492,123 + -1.5 492,124 + +0.5 492,175 + +0.6 492,270 + +0.3 492,270 + -2.1 492,370 + -0.2 492,390 - +0.3 492,395 - +0.5 492,480 + HSERO_RS02255 0.14 -0.6 492,564 + HSERO_RS02255 0.25 -1.3 492,855 - HSERO_RS02255 0.64 -2.8 492,987 - HSERO_RS02255 0.82 -1.1 493,909 + HSERO_RS02260 0.29 -3.3 493,917 - HSERO_RS02260 0.29 -4.3 494,804 + HSERO_RS02260 0.61 -3.1 495,182 + HSERO_RS02260 0.75 -3.1 495,190 - HSERO_RS02260 0.75 -4.6 495,691 - -4.9 496,020 + -0.1 496,162 + -1.4 496,237 + +0.3 496,303 + +0.7 496,424 + +0.3 496,485 - -2.5 496,540 + HSERO_RS02265 0.13 +1.8 496,590 + HSERO_RS02265 0.16 -0.7 496,627 + HSERO_RS02265 0.18 +0.5 496,637 + HSERO_RS02265 0.19 +0.3 496,643 + HSERO_RS02265 0.19 -0.2 496,665 + HSERO_RS02265 0.20 +0.5 496,744 + HSERO_RS02265 0.25 -0.1 496,786 - HSERO_RS02265 0.28 +0.1
Or see this region's nucleotide sequence