Experiment: Lomefloxacin 0.012 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS00740 and HSERO_RS00745 are separated by 147 nucleotides HSERO_RS00745 and HSERO_RS00750 are separated by 111 nucleotides
HSERO_RS00740: HSERO_RS00740 - ABC transporter permease, at 154,919 to 156,133
_RS00740
HSERO_RS00745: HSERO_RS00745 - alkylhydroperoxidase, at 156,281 to 156,742
_RS00745
HSERO_RS00750: HSERO_RS00750 - RNA polymerase subunit sigma-24, at 156,854 to 157,828
_RS00750
Position (kb) 156
157 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 155.338 kb on + strand, within HSERO_RS00740 at 155.346 kb on - strand, within HSERO_RS00740 at 155.595 kb on + strand, within HSERO_RS00740 at 155.662 kb on + strand, within HSERO_RS00740 at 155.695 kb on - strand, within HSERO_RS00740 at 155.731 kb on + strand, within HSERO_RS00740 at 155.888 kb on + strand, within HSERO_RS00740 at 155.919 kb on + strand, within HSERO_RS00740 at 155.922 kb on - strand at 155.976 kb on + strand, within HSERO_RS00740 at 156.083 kb on + strand at 156.445 kb on - strand at 156.459 kb on + strand, within HSERO_RS00745 at 156.601 kb on + strand, within HSERO_RS00745 at 156.601 kb on + strand, within HSERO_RS00745 at 156.716 kb on + strand at 156.815 kb on + strand at 157.234 kb on - strand, within HSERO_RS00750 at 157.261 kb on + strand, within HSERO_RS00750 at 157.271 kb on + strand, within HSERO_RS00750 at 157.418 kb on + strand, within HSERO_RS00750 at 157.425 kb on + strand, within HSERO_RS00750 at 157.428 kb on - strand, within HSERO_RS00750 at 157.433 kb on - strand, within HSERO_RS00750 at 157.542 kb on + strand, within HSERO_RS00750 at 157.556 kb on - strand, within HSERO_RS00750 at 157.585 kb on + strand, within HSERO_RS00750 at 157.585 kb on + strand, within HSERO_RS00750 at 157.686 kb on + strand, within HSERO_RS00750
Per-strain Table
Position Strand Gene LocusTag Fraction Lomefloxacin 0.012 mM remove 155,338 + HSERO_RS00740 0.34 +0.9 155,346 - HSERO_RS00740 0.35 -1.0 155,595 + HSERO_RS00740 0.56 +0.6 155,662 + HSERO_RS00740 0.61 -0.1 155,695 - HSERO_RS00740 0.64 -0.5 155,731 + HSERO_RS00740 0.67 -1.4 155,888 + HSERO_RS00740 0.80 +0.9 155,919 + HSERO_RS00740 0.82 -1.4 155,922 - +2.5 155,976 + HSERO_RS00740 0.87 +0.3 156,083 + -0.1 156,445 - +3.1 156,459 + HSERO_RS00745 0.39 -0.9 156,601 + HSERO_RS00745 0.69 -0.3 156,601 + HSERO_RS00745 0.69 -3.2 156,716 + -0.0 156,815 + -0.3 157,234 - HSERO_RS00750 0.39 -1.1 157,261 + HSERO_RS00750 0.42 -0.0 157,271 + HSERO_RS00750 0.43 +0.4 157,418 + HSERO_RS00750 0.58 -0.0 157,425 + HSERO_RS00750 0.59 -2.7 157,428 - HSERO_RS00750 0.59 -1.4 157,433 - HSERO_RS00750 0.59 +0.2 157,542 + HSERO_RS00750 0.71 -0.4 157,556 - HSERO_RS00750 0.72 +0.5 157,585 + HSERO_RS00750 0.75 -1.4 157,585 + HSERO_RS00750 0.75 -1.8 157,686 + HSERO_RS00750 0.85 +0.7
Or see this region's nucleotide sequence